Extract Name	Comment [TCGA Barcode]	Material Type	Protocol REF	Assay Name	Protocol REF	Assay Name	Protocol REF	Assay Name	Comment [NCBI SRA Experiment Accession]	Annotation REF	Protocol REF	Data Transformation Name	Derived Data File REF	Comment [Genome reference]	Comment [NCBI dbGAP Experiment Accession]	Comment [TCGA Include for Analysis]	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Include for Analysis]	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA Archive Name]
65039247-2813-4cf8-bd17-1a5f45378cda	TCGA-BR-4279-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_alignment	TCGA-BR-4279-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_indel	bcgsc.ca.TCGA-BR-4279-01A-01R-1131-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
65039247-2813-4cf8-bd17-1a5f45378cda	TCGA-BR-4279-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_alignment	TCGA-BR-4279-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_structural_variant	bcgsc.ca.TCGA-BR-4279-01A-01R-1131-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
6211ef0e-1aed-4914-8da6-7582a392e5fe	TCGA-BR-4201-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_alignment	TCGA-BR-4201-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_indel	bcgsc.ca.TCGA-BR-4201-01A-01R-1131-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
6211ef0e-1aed-4914-8da6-7582a392e5fe	TCGA-BR-4201-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_alignment	TCGA-BR-4201-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_structural_variant	bcgsc.ca.TCGA-BR-4201-01A-01R-1131-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
439b3b31-fb3d-4373-a39b-384e30039217	TCGA-BR-4191-01A-02R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_alignment	TCGA-BR-4191-01A-02R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_indel	bcgsc.ca.TCGA-BR-4191-01A-02R-1131-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
439b3b31-fb3d-4373-a39b-384e30039217	TCGA-BR-4191-01A-02R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_alignment	TCGA-BR-4191-01A-02R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_structural_variant	bcgsc.ca.TCGA-BR-4191-01A-02R-1131-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
dd6edede-345f-471c-a2b6-695e222232d1	TCGA-BR-4253-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_alignment	TCGA-BR-4253-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_indel	bcgsc.ca.TCGA-BR-4253-01A-01R-1131-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
dd6edede-345f-471c-a2b6-695e222232d1	TCGA-BR-4253-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_alignment	TCGA-BR-4253-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_structural_variant	bcgsc.ca.TCGA-BR-4253-01A-01R-1131-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
38e87741-172f-4840-9932-3fc277587a2c	TCGA-BR-4363-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_alignment	TCGA-BR-4363-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_indel	bcgsc.ca.TCGA-BR-4363-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
38e87741-172f-4840-9932-3fc277587a2c	TCGA-BR-4363-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_alignment	TCGA-BR-4363-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4363-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
0d6f061b-119b-4bcf-9b1b-df7d7061af0d	TCGA-CG-4475-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_alignment	TCGA-CG-4475-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4475-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
0d6f061b-119b-4bcf-9b1b-df7d7061af0d	TCGA-CG-4475-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_alignment	TCGA-CG-4475-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4475-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7af442fb-3c5b-456a-bcfc-9c6c4fbc4053	TCGA-CG-4301-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_alignment	TCGA-CG-4301-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4301-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7af442fb-3c5b-456a-bcfc-9c6c4fbc4053	TCGA-CG-4301-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_alignment	TCGA-CG-4301-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4301-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e52150bb-ceca-4075-bf9b-8cd3b39436f4	TCGA-BR-4366-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_alignment	TCGA-BR-4366-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_indel	bcgsc.ca.TCGA-BR-4366-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e52150bb-ceca-4075-bf9b-8cd3b39436f4	TCGA-BR-4366-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_alignment	TCGA-BR-4366-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4366-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
1af0a9d5-1d19-4666-948c-9aecc7555368	TCGA-CG-4436-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_alignment	TCGA-CG-4436-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4436-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
1af0a9d5-1d19-4666-948c-9aecc7555368	TCGA-CG-4436-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_alignment	TCGA-CG-4436-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4436-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
31d0fc5e-6ea3-419f-9f8d-ba638a6c0772	TCGA-CG-4460-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_alignment	TCGA-CG-4460-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4460-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
31d0fc5e-6ea3-419f-9f8d-ba638a6c0772	TCGA-CG-4460-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_alignment	TCGA-CG-4460-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4460-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
86daa492-f2c2-470f-8efe-c08f0e5069a9	TCGA-CG-4476-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_alignment	TCGA-CG-4476-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4476-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
86daa492-f2c2-470f-8efe-c08f0e5069a9	TCGA-CG-4476-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_alignment	TCGA-CG-4476-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4476-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
b2b49a63-b59d-4dce-91e2-0d85c2720560	TCGA-CG-4304-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_alignment	TCGA-CG-4304-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4304-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
b2b49a63-b59d-4dce-91e2-0d85c2720560	TCGA-CG-4304-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_alignment	TCGA-CG-4304-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4304-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e71c5041-85a4-47b9-af09-43ac23bbf1ab	TCGA-BR-4367-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_alignment	TCGA-BR-4367-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_indel	bcgsc.ca.TCGA-BR-4367-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e71c5041-85a4-47b9-af09-43ac23bbf1ab	TCGA-BR-4367-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_alignment	TCGA-BR-4367-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4367-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7f2b32fa-a74e-491f-b43a-a0672098d949	TCGA-CG-4438-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_alignment	TCGA-CG-4438-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4438-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7f2b32fa-a74e-491f-b43a-a0672098d949	TCGA-CG-4438-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_alignment	TCGA-CG-4438-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4438-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
03ece93c-67f7-42b9-942f-653583ca3bee	TCGA-CG-4462-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_alignment	TCGA-CG-4462-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4462-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
03ece93c-67f7-42b9-942f-653583ca3bee	TCGA-CG-4462-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_alignment	TCGA-CG-4462-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4462-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
be12a5a1-933e-4d0a-86e5-050466cc2f9e	TCGA-CG-4477-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_alignment	TCGA-CG-4477-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4477-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
be12a5a1-933e-4d0a-86e5-050466cc2f9e	TCGA-CG-4477-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_alignment	TCGA-CG-4477-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4477-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
31ce13c5-7d50-4c7f-a222-ad6aea0a0699	TCGA-CG-4305-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_alignment	TCGA-CG-4305-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4305-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
31ce13c5-7d50-4c7f-a222-ad6aea0a0699	TCGA-CG-4305-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_alignment	TCGA-CG-4305-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4305-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
8c87a1a6-301e-4f12-b5f2-3de6fa9ec658	TCGA-BR-4368-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_alignment	TCGA-BR-4368-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_indel	bcgsc.ca.TCGA-BR-4368-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
8c87a1a6-301e-4f12-b5f2-3de6fa9ec658	TCGA-BR-4368-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_alignment	TCGA-BR-4368-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4368-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
690c5eb5-c5c0-434e-a229-11785474e112	TCGA-CG-4440-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_alignment	TCGA-CG-4440-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4440-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
690c5eb5-c5c0-434e-a229-11785474e112	TCGA-CG-4440-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_alignment	TCGA-CG-4440-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4440-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
4603cdae-b4bc-4557-bd7b-9f84516861a6	TCGA-CG-4465-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_alignment	TCGA-CG-4465-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4465-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
4603cdae-b4bc-4557-bd7b-9f84516861a6	TCGA-CG-4465-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_alignment	TCGA-CG-4465-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4465-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d3bc5384-c0bc-4c5c-8051-4682fe37a160	TCGA-CG-4306-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_alignment	TCGA-CG-4306-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4306-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d3bc5384-c0bc-4c5c-8051-4682fe37a160	TCGA-CG-4306-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_alignment	TCGA-CG-4306-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4306-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
0c392e19-322b-4e2c-896f-198871324295	TCGA-BR-4369-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_alignment	TCGA-BR-4369-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_indel	bcgsc.ca.TCGA-BR-4369-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
0c392e19-322b-4e2c-896f-198871324295	TCGA-BR-4369-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_alignment	TCGA-BR-4369-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4369-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
ba717f17-8371-4860-a332-29b17eea8470	TCGA-CG-4442-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_alignment	TCGA-CG-4442-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4442-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
ba717f17-8371-4860-a332-29b17eea8470	TCGA-CG-4442-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_alignment	TCGA-CG-4442-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4442-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
a0cb4623-90a4-40e4-8e92-6da47bee8c7d	TCGA-CG-4466-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_alignment	TCGA-CG-4466-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4466-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
a0cb4623-90a4-40e4-8e92-6da47bee8c7d	TCGA-CG-4466-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_alignment	TCGA-CG-4466-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4466-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d45f90f2-a0c3-4d34-944c-9f0ced42cb09	TCGA-BR-4357-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_alignment	TCGA-BR-4357-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_indel	bcgsc.ca.TCGA-BR-4357-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d45f90f2-a0c3-4d34-944c-9f0ced42cb09	TCGA-BR-4357-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_alignment	TCGA-BR-4357-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4357-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d5779910-decd-40e6-b779-83f988956e82	TCGA-BR-4370-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_alignment	TCGA-BR-4370-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_indel	bcgsc.ca.TCGA-BR-4370-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d5779910-decd-40e6-b779-83f988956e82	TCGA-BR-4370-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_alignment	TCGA-BR-4370-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4370-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
95698d6f-5687-4261-a6f4-30a349f74baf	TCGA-CG-4443-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_alignment	TCGA-CG-4443-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4443-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
95698d6f-5687-4261-a6f4-30a349f74baf	TCGA-CG-4443-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_alignment	TCGA-CG-4443-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4443-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0	TCGA-CG-4469-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_alignment	TCGA-CG-4469-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4469-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0	TCGA-CG-4469-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_alignment	TCGA-CG-4469-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4469-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
29942ecb-05d0-46d0-b4f6-0252ea19b8a2	TCGA-BR-4361-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_alignment	TCGA-BR-4361-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_indel	bcgsc.ca.TCGA-BR-4361-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
29942ecb-05d0-46d0-b4f6-0252ea19b8a2	TCGA-BR-4361-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_alignment	TCGA-BR-4361-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4361-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d7f9513d-341c-46b9-ba45-e05eb5f19889	TCGA-BR-4371-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_alignment	TCGA-BR-4371-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_indel	bcgsc.ca.TCGA-BR-4371-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d7f9513d-341c-46b9-ba45-e05eb5f19889	TCGA-BR-4371-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_alignment	TCGA-BR-4371-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4371-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e91f051f-8cba-4e4a-94c3-f3c07f1b4b79	TCGA-CG-4444-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_alignment	TCGA-CG-4444-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4444-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e91f051f-8cba-4e4a-94c3-f3c07f1b4b79	TCGA-CG-4444-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_alignment	TCGA-CG-4444-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4444-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14	TCGA-CG-4472-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_alignment	TCGA-CG-4472-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4472-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14	TCGA-CG-4472-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_alignment	TCGA-CG-4472-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4472-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
99d614e6-e492-45d2-97b9-4d6a1373dd51	TCGA-BR-4362-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_alignment	TCGA-BR-4362-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_indel	bcgsc.ca.TCGA-BR-4362-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
99d614e6-e492-45d2-97b9-4d6a1373dd51	TCGA-BR-4362-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_alignment	TCGA-BR-4362-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4362-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
322fec81-00af-45da-8769-b1339a040f46	TCGA-CG-4449-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_alignment	TCGA-CG-4449-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_indel	bcgsc.ca.TCGA-CG-4449-01A-01R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
322fec81-00af-45da-8769-b1339a040f46	TCGA-CG-4449-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_alignment	TCGA-CG-4449-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4449-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
64ae6065-fbd5-48fc-a31c-caaef87bcc0b	TCGA-CG-4474-01A-02R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_alignment	TCGA-CG-4474-01A-02R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_indel	bcgsc.ca.TCGA-CG-4474-01A-02R-1157-13.bcgsc.ca.1.2.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
64ae6065-fbd5-48fc-a31c-caaef87bcc0b	TCGA-CG-4474-01A-02R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_alignment	TCGA-CG-4474-01A-02R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4474-01A-02R-1157-13.bcgsc.ca.1.2.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
65039247-2813-4cf8-bd17-1a5f45378cda	TCGA-BR-4279-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_alignment	TCGA-BR-4279-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_structural_variant	bcgsc.ca.TCGA-BR-4279-01A-01R-1131-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
6211ef0e-1aed-4914-8da6-7582a392e5fe	TCGA-BR-4201-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_alignment	TCGA-BR-4201-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_structural_variant	bcgsc.ca.TCGA-BR-4201-01A-01R-1131-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
439b3b31-fb3d-4373-a39b-384e30039217	TCGA-BR-4191-01A-02R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_alignment	TCGA-BR-4191-01A-02R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_structural_variant	bcgsc.ca.TCGA-BR-4191-01A-02R-1131-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
dd6edede-345f-471c-a2b6-695e222232d1	TCGA-BR-4253-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_alignment	TCGA-BR-4253-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_structural_variant	bcgsc.ca.TCGA-BR-4253-01A-01R-1131-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
38e87741-172f-4840-9932-3fc277587a2c	TCGA-BR-4363-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_alignment	TCGA-BR-4363-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4363-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
0d6f061b-119b-4bcf-9b1b-df7d7061af0d	TCGA-CG-4475-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_alignment	TCGA-CG-4475-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4475-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7af442fb-3c5b-456a-bcfc-9c6c4fbc4053	TCGA-CG-4301-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_alignment	TCGA-CG-4301-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4301-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e52150bb-ceca-4075-bf9b-8cd3b39436f4	TCGA-BR-4366-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_alignment	TCGA-BR-4366-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4366-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
1af0a9d5-1d19-4666-948c-9aecc7555368	TCGA-CG-4436-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_alignment	TCGA-CG-4436-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4436-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
31d0fc5e-6ea3-419f-9f8d-ba638a6c0772	TCGA-CG-4460-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_alignment	TCGA-CG-4460-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4460-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
86daa492-f2c2-470f-8efe-c08f0e5069a9	TCGA-CG-4476-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_alignment	TCGA-CG-4476-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4476-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
b2b49a63-b59d-4dce-91e2-0d85c2720560	TCGA-CG-4304-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_alignment	TCGA-CG-4304-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4304-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e71c5041-85a4-47b9-af09-43ac23bbf1ab	TCGA-BR-4367-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_alignment	TCGA-BR-4367-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4367-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7f2b32fa-a74e-491f-b43a-a0672098d949	TCGA-CG-4438-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_alignment	TCGA-CG-4438-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4438-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
03ece93c-67f7-42b9-942f-653583ca3bee	TCGA-CG-4462-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_alignment	TCGA-CG-4462-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4462-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
be12a5a1-933e-4d0a-86e5-050466cc2f9e	TCGA-CG-4477-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_alignment	TCGA-CG-4477-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4477-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
31ce13c5-7d50-4c7f-a222-ad6aea0a0699	TCGA-CG-4305-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_alignment	TCGA-CG-4305-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4305-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
8c87a1a6-301e-4f12-b5f2-3de6fa9ec658	TCGA-BR-4368-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_alignment	TCGA-BR-4368-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4368-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
690c5eb5-c5c0-434e-a229-11785474e112	TCGA-CG-4440-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_alignment	TCGA-CG-4440-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4440-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
4603cdae-b4bc-4557-bd7b-9f84516861a6	TCGA-CG-4465-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_alignment	TCGA-CG-4465-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4465-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d3bc5384-c0bc-4c5c-8051-4682fe37a160	TCGA-CG-4306-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_alignment	TCGA-CG-4306-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4306-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
0c392e19-322b-4e2c-896f-198871324295	TCGA-BR-4369-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_alignment	TCGA-BR-4369-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4369-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
ba717f17-8371-4860-a332-29b17eea8470	TCGA-CG-4442-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_alignment	TCGA-CG-4442-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4442-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
a0cb4623-90a4-40e4-8e92-6da47bee8c7d	TCGA-CG-4466-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_alignment	TCGA-CG-4466-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4466-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d45f90f2-a0c3-4d34-944c-9f0ced42cb09	TCGA-BR-4357-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_alignment	TCGA-BR-4357-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4357-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d5779910-decd-40e6-b779-83f988956e82	TCGA-BR-4370-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_alignment	TCGA-BR-4370-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4370-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
95698d6f-5687-4261-a6f4-30a349f74baf	TCGA-CG-4443-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_alignment	TCGA-CG-4443-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4443-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0	TCGA-CG-4469-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_alignment	TCGA-CG-4469-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4469-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
29942ecb-05d0-46d0-b4f6-0252ea19b8a2	TCGA-BR-4361-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_alignment	TCGA-BR-4361-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4361-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d7f9513d-341c-46b9-ba45-e05eb5f19889	TCGA-BR-4371-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_alignment	TCGA-BR-4371-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4371-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e91f051f-8cba-4e4a-94c3-f3c07f1b4b79	TCGA-CG-4444-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_alignment	TCGA-CG-4444-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4444-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14	TCGA-CG-4472-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_alignment	TCGA-CG-4472-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4472-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
99d614e6-e492-45d2-97b9-4d6a1373dd51	TCGA-BR-4362-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_alignment	TCGA-BR-4362-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-BR-4362-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
322fec81-00af-45da-8769-b1339a040f46	TCGA-CG-4449-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_alignment	TCGA-CG-4449-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4449-01A-01R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
64ae6065-fbd5-48fc-a31c-caaef87bcc0b	TCGA-CG-4474-01A-02R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_alignment	TCGA-CG-4474-01A-02R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_structural_variant	bcgsc.ca.TCGA-CG-4474-01A-02R-1157-13.bcgsc.ca.1.2.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
65039247-2813-4cf8-bd17-1a5f45378cda	TCGA-BR-4279-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_alignment	TCGA-BR-4279-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_exon_expression	TCGA-BR-4279-01A-01R-1131-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
65039247-2813-4cf8-bd17-1a5f45378cda	TCGA-BR-4279-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_alignment	TCGA-BR-4279-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_gene_expression	TCGA-BR-4279-01A-01R-1131-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
65039247-2813-4cf8-bd17-1a5f45378cda	TCGA-BR-4279-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_alignment	TCGA-BR-4279-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_splice_junction_expression	TCGA-BR-4279-01A-01R-1131-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
6211ef0e-1aed-4914-8da6-7582a392e5fe	TCGA-BR-4201-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_alignment	TCGA-BR-4201-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_exon_expression	TCGA-BR-4201-01A-01R-1131-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
6211ef0e-1aed-4914-8da6-7582a392e5fe	TCGA-BR-4201-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_alignment	TCGA-BR-4201-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_gene_expression	TCGA-BR-4201-01A-01R-1131-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
6211ef0e-1aed-4914-8da6-7582a392e5fe	TCGA-BR-4201-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_alignment	TCGA-BR-4201-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_splice_junction_expression	TCGA-BR-4201-01A-01R-1131-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
439b3b31-fb3d-4373-a39b-384e30039217	TCGA-BR-4191-01A-02R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_alignment	TCGA-BR-4191-01A-02R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_exon_expression	TCGA-BR-4191-01A-02R-1131-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
439b3b31-fb3d-4373-a39b-384e30039217	TCGA-BR-4191-01A-02R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_alignment	TCGA-BR-4191-01A-02R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_gene_expression	TCGA-BR-4191-01A-02R-1131-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
439b3b31-fb3d-4373-a39b-384e30039217	TCGA-BR-4191-01A-02R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_alignment	TCGA-BR-4191-01A-02R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_splice_junction_expression	TCGA-BR-4191-01A-02R-1131-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
dd6edede-345f-471c-a2b6-695e222232d1	TCGA-BR-4253-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_alignment	TCGA-BR-4253-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_exon_expression	TCGA-BR-4253-01A-01R-1131-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
dd6edede-345f-471c-a2b6-695e222232d1	TCGA-BR-4253-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_alignment	TCGA-BR-4253-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_gene_expression	TCGA-BR-4253-01A-01R-1131-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
dd6edede-345f-471c-a2b6-695e222232d1	TCGA-BR-4253-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_alignment	TCGA-BR-4253-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_splice_junction_expression	TCGA-BR-4253-01A-01R-1131-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
38e87741-172f-4840-9932-3fc277587a2c	TCGA-BR-4363-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_alignment	TCGA-BR-4363-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_exon_expression	TCGA-BR-4363-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
38e87741-172f-4840-9932-3fc277587a2c	TCGA-BR-4363-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_alignment	TCGA-BR-4363-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_gene_expression	TCGA-BR-4363-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
38e87741-172f-4840-9932-3fc277587a2c	TCGA-BR-4363-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_alignment	TCGA-BR-4363-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_splice_junction_expression	TCGA-BR-4363-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
0d6f061b-119b-4bcf-9b1b-df7d7061af0d	TCGA-CG-4475-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_alignment	TCGA-CG-4475-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_exon_expression	TCGA-CG-4475-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
0d6f061b-119b-4bcf-9b1b-df7d7061af0d	TCGA-CG-4475-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_alignment	TCGA-CG-4475-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_gene_expression	TCGA-CG-4475-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
0d6f061b-119b-4bcf-9b1b-df7d7061af0d	TCGA-CG-4475-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_alignment	TCGA-CG-4475-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4475-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
7af442fb-3c5b-456a-bcfc-9c6c4fbc4053	TCGA-CG-4301-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_alignment	TCGA-CG-4301-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_exon_expression	TCGA-CG-4301-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
7af442fb-3c5b-456a-bcfc-9c6c4fbc4053	TCGA-CG-4301-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_alignment	TCGA-CG-4301-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_gene_expression	TCGA-CG-4301-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
7af442fb-3c5b-456a-bcfc-9c6c4fbc4053	TCGA-CG-4301-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_alignment	TCGA-CG-4301-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4301-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
e52150bb-ceca-4075-bf9b-8cd3b39436f4	TCGA-BR-4366-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_alignment	TCGA-BR-4366-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_exon_expression	TCGA-BR-4366-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
e52150bb-ceca-4075-bf9b-8cd3b39436f4	TCGA-BR-4366-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_alignment	TCGA-BR-4366-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_gene_expression	TCGA-BR-4366-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
e52150bb-ceca-4075-bf9b-8cd3b39436f4	TCGA-BR-4366-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_alignment	TCGA-BR-4366-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_splice_junction_expression	TCGA-BR-4366-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
1af0a9d5-1d19-4666-948c-9aecc7555368	TCGA-CG-4436-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_alignment	TCGA-CG-4436-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_exon_expression	TCGA-CG-4436-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
1af0a9d5-1d19-4666-948c-9aecc7555368	TCGA-CG-4436-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_alignment	TCGA-CG-4436-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_gene_expression	TCGA-CG-4436-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
1af0a9d5-1d19-4666-948c-9aecc7555368	TCGA-CG-4436-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_alignment	TCGA-CG-4436-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4436-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
31d0fc5e-6ea3-419f-9f8d-ba638a6c0772	TCGA-CG-4460-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_alignment	TCGA-CG-4460-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_exon_expression	TCGA-CG-4460-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
31d0fc5e-6ea3-419f-9f8d-ba638a6c0772	TCGA-CG-4460-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_alignment	TCGA-CG-4460-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_gene_expression	TCGA-CG-4460-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
31d0fc5e-6ea3-419f-9f8d-ba638a6c0772	TCGA-CG-4460-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_alignment	TCGA-CG-4460-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4460-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
86daa492-f2c2-470f-8efe-c08f0e5069a9	TCGA-CG-4476-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_alignment	TCGA-CG-4476-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_exon_expression	TCGA-CG-4476-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
86daa492-f2c2-470f-8efe-c08f0e5069a9	TCGA-CG-4476-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_alignment	TCGA-CG-4476-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_gene_expression	TCGA-CG-4476-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
86daa492-f2c2-470f-8efe-c08f0e5069a9	TCGA-CG-4476-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_alignment	TCGA-CG-4476-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4476-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
b2b49a63-b59d-4dce-91e2-0d85c2720560	TCGA-CG-4304-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_alignment	TCGA-CG-4304-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_exon_expression	TCGA-CG-4304-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
b2b49a63-b59d-4dce-91e2-0d85c2720560	TCGA-CG-4304-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_alignment	TCGA-CG-4304-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_gene_expression	TCGA-CG-4304-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
b2b49a63-b59d-4dce-91e2-0d85c2720560	TCGA-CG-4304-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_alignment	TCGA-CG-4304-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4304-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
e71c5041-85a4-47b9-af09-43ac23bbf1ab	TCGA-BR-4367-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_alignment	TCGA-BR-4367-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_exon_expression	TCGA-BR-4367-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
e71c5041-85a4-47b9-af09-43ac23bbf1ab	TCGA-BR-4367-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_alignment	TCGA-BR-4367-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_gene_expression	TCGA-BR-4367-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
e71c5041-85a4-47b9-af09-43ac23bbf1ab	TCGA-BR-4367-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_alignment	TCGA-BR-4367-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_splice_junction_expression	TCGA-BR-4367-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
7f2b32fa-a74e-491f-b43a-a0672098d949	TCGA-CG-4438-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_alignment	TCGA-CG-4438-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_exon_expression	TCGA-CG-4438-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
7f2b32fa-a74e-491f-b43a-a0672098d949	TCGA-CG-4438-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_alignment	TCGA-CG-4438-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_gene_expression	TCGA-CG-4438-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
7f2b32fa-a74e-491f-b43a-a0672098d949	TCGA-CG-4438-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_alignment	TCGA-CG-4438-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4438-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
03ece93c-67f7-42b9-942f-653583ca3bee	TCGA-CG-4462-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_alignment	TCGA-CG-4462-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_exon_expression	TCGA-CG-4462-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
03ece93c-67f7-42b9-942f-653583ca3bee	TCGA-CG-4462-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_alignment	TCGA-CG-4462-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_gene_expression	TCGA-CG-4462-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
03ece93c-67f7-42b9-942f-653583ca3bee	TCGA-CG-4462-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_alignment	TCGA-CG-4462-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4462-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
be12a5a1-933e-4d0a-86e5-050466cc2f9e	TCGA-CG-4477-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_alignment	TCGA-CG-4477-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_exon_expression	TCGA-CG-4477-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
be12a5a1-933e-4d0a-86e5-050466cc2f9e	TCGA-CG-4477-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_alignment	TCGA-CG-4477-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_gene_expression	TCGA-CG-4477-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
be12a5a1-933e-4d0a-86e5-050466cc2f9e	TCGA-CG-4477-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_alignment	TCGA-CG-4477-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4477-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
31ce13c5-7d50-4c7f-a222-ad6aea0a0699	TCGA-CG-4305-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_alignment	TCGA-CG-4305-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_exon_expression	TCGA-CG-4305-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
31ce13c5-7d50-4c7f-a222-ad6aea0a0699	TCGA-CG-4305-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_alignment	TCGA-CG-4305-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_gene_expression	TCGA-CG-4305-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
31ce13c5-7d50-4c7f-a222-ad6aea0a0699	TCGA-CG-4305-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_alignment	TCGA-CG-4305-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4305-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
8c87a1a6-301e-4f12-b5f2-3de6fa9ec658	TCGA-BR-4368-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_alignment	TCGA-BR-4368-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_exon_expression	TCGA-BR-4368-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
8c87a1a6-301e-4f12-b5f2-3de6fa9ec658	TCGA-BR-4368-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_alignment	TCGA-BR-4368-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_gene_expression	TCGA-BR-4368-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
8c87a1a6-301e-4f12-b5f2-3de6fa9ec658	TCGA-BR-4368-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_alignment	TCGA-BR-4368-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_splice_junction_expression	TCGA-BR-4368-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
690c5eb5-c5c0-434e-a229-11785474e112	TCGA-CG-4440-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_alignment	TCGA-CG-4440-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_exon_expression	TCGA-CG-4440-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
690c5eb5-c5c0-434e-a229-11785474e112	TCGA-CG-4440-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_alignment	TCGA-CG-4440-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_gene_expression	TCGA-CG-4440-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
690c5eb5-c5c0-434e-a229-11785474e112	TCGA-CG-4440-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_alignment	TCGA-CG-4440-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4440-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
4603cdae-b4bc-4557-bd7b-9f84516861a6	TCGA-CG-4465-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_alignment	TCGA-CG-4465-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_exon_expression	TCGA-CG-4465-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
4603cdae-b4bc-4557-bd7b-9f84516861a6	TCGA-CG-4465-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_alignment	TCGA-CG-4465-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_gene_expression	TCGA-CG-4465-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
4603cdae-b4bc-4557-bd7b-9f84516861a6	TCGA-CG-4465-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_alignment	TCGA-CG-4465-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4465-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d3bc5384-c0bc-4c5c-8051-4682fe37a160	TCGA-CG-4306-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_alignment	TCGA-CG-4306-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_exon_expression	TCGA-CG-4306-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d3bc5384-c0bc-4c5c-8051-4682fe37a160	TCGA-CG-4306-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_alignment	TCGA-CG-4306-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_gene_expression	TCGA-CG-4306-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d3bc5384-c0bc-4c5c-8051-4682fe37a160	TCGA-CG-4306-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_alignment	TCGA-CG-4306-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4306-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
0c392e19-322b-4e2c-896f-198871324295	TCGA-BR-4369-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_alignment	TCGA-BR-4369-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_exon_expression	TCGA-BR-4369-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
0c392e19-322b-4e2c-896f-198871324295	TCGA-BR-4369-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_alignment	TCGA-BR-4369-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_gene_expression	TCGA-BR-4369-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
0c392e19-322b-4e2c-896f-198871324295	TCGA-BR-4369-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_alignment	TCGA-BR-4369-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_splice_junction_expression	TCGA-BR-4369-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
ba717f17-8371-4860-a332-29b17eea8470	TCGA-CG-4442-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_alignment	TCGA-CG-4442-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_exon_expression	TCGA-CG-4442-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
ba717f17-8371-4860-a332-29b17eea8470	TCGA-CG-4442-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_alignment	TCGA-CG-4442-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_gene_expression	TCGA-CG-4442-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
ba717f17-8371-4860-a332-29b17eea8470	TCGA-CG-4442-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_alignment	TCGA-CG-4442-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4442-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
a0cb4623-90a4-40e4-8e92-6da47bee8c7d	TCGA-CG-4466-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_alignment	TCGA-CG-4466-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_exon_expression	TCGA-CG-4466-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
a0cb4623-90a4-40e4-8e92-6da47bee8c7d	TCGA-CG-4466-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_alignment	TCGA-CG-4466-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_gene_expression	TCGA-CG-4466-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
a0cb4623-90a4-40e4-8e92-6da47bee8c7d	TCGA-CG-4466-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_alignment	TCGA-CG-4466-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4466-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d45f90f2-a0c3-4d34-944c-9f0ced42cb09	TCGA-BR-4357-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_alignment	TCGA-BR-4357-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_exon_expression	TCGA-BR-4357-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d45f90f2-a0c3-4d34-944c-9f0ced42cb09	TCGA-BR-4357-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_alignment	TCGA-BR-4357-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_gene_expression	TCGA-BR-4357-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d45f90f2-a0c3-4d34-944c-9f0ced42cb09	TCGA-BR-4357-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_alignment	TCGA-BR-4357-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_splice_junction_expression	TCGA-BR-4357-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d5779910-decd-40e6-b779-83f988956e82	TCGA-BR-4370-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_alignment	TCGA-BR-4370-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_exon_expression	TCGA-BR-4370-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d5779910-decd-40e6-b779-83f988956e82	TCGA-BR-4370-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_alignment	TCGA-BR-4370-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_gene_expression	TCGA-BR-4370-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d5779910-decd-40e6-b779-83f988956e82	TCGA-BR-4370-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_alignment	TCGA-BR-4370-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_splice_junction_expression	TCGA-BR-4370-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
95698d6f-5687-4261-a6f4-30a349f74baf	TCGA-CG-4443-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_alignment	TCGA-CG-4443-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_exon_expression	TCGA-CG-4443-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
95698d6f-5687-4261-a6f4-30a349f74baf	TCGA-CG-4443-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_alignment	TCGA-CG-4443-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_gene_expression	TCGA-CG-4443-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
95698d6f-5687-4261-a6f4-30a349f74baf	TCGA-CG-4443-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_alignment	TCGA-CG-4443-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4443-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0	TCGA-CG-4469-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_alignment	TCGA-CG-4469-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_exon_expression	TCGA-CG-4469-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0	TCGA-CG-4469-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_alignment	TCGA-CG-4469-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_gene_expression	TCGA-CG-4469-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0	TCGA-CG-4469-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_alignment	TCGA-CG-4469-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4469-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
29942ecb-05d0-46d0-b4f6-0252ea19b8a2	TCGA-BR-4361-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_alignment	TCGA-BR-4361-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_exon_expression	TCGA-BR-4361-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
29942ecb-05d0-46d0-b4f6-0252ea19b8a2	TCGA-BR-4361-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_alignment	TCGA-BR-4361-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_gene_expression	TCGA-BR-4361-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
29942ecb-05d0-46d0-b4f6-0252ea19b8a2	TCGA-BR-4361-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_alignment	TCGA-BR-4361-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_splice_junction_expression	TCGA-BR-4361-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d7f9513d-341c-46b9-ba45-e05eb5f19889	TCGA-BR-4371-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_alignment	TCGA-BR-4371-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_exon_expression	TCGA-BR-4371-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d7f9513d-341c-46b9-ba45-e05eb5f19889	TCGA-BR-4371-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_alignment	TCGA-BR-4371-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_gene_expression	TCGA-BR-4371-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
d7f9513d-341c-46b9-ba45-e05eb5f19889	TCGA-BR-4371-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_alignment	TCGA-BR-4371-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_splice_junction_expression	TCGA-BR-4371-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
e91f051f-8cba-4e4a-94c3-f3c07f1b4b79	TCGA-CG-4444-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_alignment	TCGA-CG-4444-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_exon_expression	TCGA-CG-4444-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
e91f051f-8cba-4e4a-94c3-f3c07f1b4b79	TCGA-CG-4444-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_alignment	TCGA-CG-4444-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_gene_expression	TCGA-CG-4444-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
e91f051f-8cba-4e4a-94c3-f3c07f1b4b79	TCGA-CG-4444-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_alignment	TCGA-CG-4444-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4444-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14	TCGA-CG-4472-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_alignment	TCGA-CG-4472-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_exon_expression	TCGA-CG-4472-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14	TCGA-CG-4472-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_alignment	TCGA-CG-4472-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_gene_expression	TCGA-CG-4472-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14	TCGA-CG-4472-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_alignment	TCGA-CG-4472-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4472-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
99d614e6-e492-45d2-97b9-4d6a1373dd51	TCGA-BR-4362-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_alignment	TCGA-BR-4362-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_exon_expression	TCGA-BR-4362-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
99d614e6-e492-45d2-97b9-4d6a1373dd51	TCGA-BR-4362-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_alignment	TCGA-BR-4362-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_gene_expression	TCGA-BR-4362-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
99d614e6-e492-45d2-97b9-4d6a1373dd51	TCGA-BR-4362-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_alignment	TCGA-BR-4362-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_splice_junction_expression	TCGA-BR-4362-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
322fec81-00af-45da-8769-b1339a040f46	TCGA-CG-4449-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_alignment	TCGA-CG-4449-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_exon_expression	TCGA-CG-4449-01A-01R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
322fec81-00af-45da-8769-b1339a040f46	TCGA-CG-4449-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_alignment	TCGA-CG-4449-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_gene_expression	TCGA-CG-4449-01A-01R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
322fec81-00af-45da-8769-b1339a040f46	TCGA-CG-4449-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_alignment	TCGA-CG-4449-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_splice_junction_expression	TCGA-CG-4449-01A-01R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
64ae6065-fbd5-48fc-a31c-caaef87bcc0b	TCGA-CG-4474-01A-02R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_alignment	TCGA-CG-4474-01A-02R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_exon_expression	TCGA-CG-4474-01A-02R-1157-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
64ae6065-fbd5-48fc-a31c-caaef87bcc0b	TCGA-CG-4474-01A-02R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_alignment	TCGA-CG-4474-01A-02R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_gene_expression	TCGA-CG-4474-01A-02R-1157-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
64ae6065-fbd5-48fc-a31c-caaef87bcc0b	TCGA-CG-4474-01A-02R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_alignment	TCGA-CG-4474-01A-02R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_splice_junction_expression	TCGA-CG-4474-01A-02R-1157-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
31d0fc5e-6ea3-419f-9f8d-ba638a6c0772	TCGA-CG-4460-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31d0fc5e-6ea3-419f-9f8d-ba638a6c0772_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_alignment	TCGA-CG-4460-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4460-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4460-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e71c5041-85a4-47b9-af09-43ac23bbf1ab	TCGA-BR-4367-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e71c5041-85a4-47b9-af09-43ac23bbf1ab_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_alignment	TCGA-BR-4367-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4367-01A-01R-1157-13_snv	bcgsc.ca.TCGA-BR-4367-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7f2b32fa-a74e-491f-b43a-a0672098d949	TCGA-CG-4438-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7f2b32fa-a74e-491f-b43a-a0672098d949_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_alignment	TCGA-CG-4438-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4438-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4438-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
03ece93c-67f7-42b9-942f-653583ca3bee	TCGA-CG-4462-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	03ece93c-67f7-42b9-942f-653583ca3bee_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_alignment	TCGA-CG-4462-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4462-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4462-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
be12a5a1-933e-4d0a-86e5-050466cc2f9e	TCGA-CG-4477-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	be12a5a1-933e-4d0a-86e5-050466cc2f9e_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_alignment	TCGA-CG-4477-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4477-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4477-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
31ce13c5-7d50-4c7f-a222-ad6aea0a0699	TCGA-CG-4305-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	31ce13c5-7d50-4c7f-a222-ad6aea0a0699_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_alignment	TCGA-CG-4305-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4305-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4305-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d3bc5384-c0bc-4c5c-8051-4682fe37a160	TCGA-CG-4306-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d3bc5384-c0bc-4c5c-8051-4682fe37a160_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_alignment	TCGA-CG-4306-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4306-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4306-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
ba717f17-8371-4860-a332-29b17eea8470	TCGA-CG-4442-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ba717f17-8371-4860-a332-29b17eea8470_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_alignment	TCGA-CG-4442-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4442-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4442-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d45f90f2-a0c3-4d34-944c-9f0ced42cb09	TCGA-BR-4357-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d45f90f2-a0c3-4d34-944c-9f0ced42cb09_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_alignment	TCGA-BR-4357-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4357-01A-01R-1157-13_snv	bcgsc.ca.TCGA-BR-4357-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14	TCGA-CG-4472-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	ebdd43fb-7cdf-4bb9-9f93-cfac0024fe14_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_alignment	TCGA-CG-4472-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4472-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4472-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
65039247-2813-4cf8-bd17-1a5f45378cda	TCGA-BR-4279-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	65039247-2813-4cf8-bd17-1a5f45378cda_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_alignment	TCGA-BR-4279-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4279-01A-01R-1131-13_snv	bcgsc.ca.TCGA-BR-4279-01A-01R-1131-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
6211ef0e-1aed-4914-8da6-7582a392e5fe	TCGA-BR-4201-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	6211ef0e-1aed-4914-8da6-7582a392e5fe_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_alignment	TCGA-BR-4201-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4201-01A-01R-1131-13_snv	bcgsc.ca.TCGA-BR-4201-01A-01R-1131-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
439b3b31-fb3d-4373-a39b-384e30039217	TCGA-BR-4191-01A-02R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	439b3b31-fb3d-4373-a39b-384e30039217_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_alignment	TCGA-BR-4191-01A-02R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4191-01A-02R-1131-13_snv	bcgsc.ca.TCGA-BR-4191-01A-02R-1131-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
dd6edede-345f-471c-a2b6-695e222232d1	TCGA-BR-4253-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	dd6edede-345f-471c-a2b6-695e222232d1_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_alignment	TCGA-BR-4253-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4253-01A-01R-1131-13_snv	bcgsc.ca.TCGA-BR-4253-01A-01R-1131-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
38e87741-172f-4840-9932-3fc277587a2c	TCGA-BR-4363-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	38e87741-172f-4840-9932-3fc277587a2c_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_alignment	TCGA-BR-4363-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4363-01A-01R-1157-13_snv	bcgsc.ca.TCGA-BR-4363-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
0d6f061b-119b-4bcf-9b1b-df7d7061af0d	TCGA-CG-4475-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0d6f061b-119b-4bcf-9b1b-df7d7061af0d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_alignment	TCGA-CG-4475-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4475-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4475-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7af442fb-3c5b-456a-bcfc-9c6c4fbc4053	TCGA-CG-4301-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7af442fb-3c5b-456a-bcfc-9c6c4fbc4053_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_alignment	TCGA-CG-4301-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4301-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4301-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e52150bb-ceca-4075-bf9b-8cd3b39436f4	TCGA-BR-4366-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e52150bb-ceca-4075-bf9b-8cd3b39436f4_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_alignment	TCGA-BR-4366-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4366-01A-01R-1157-13_snv	bcgsc.ca.TCGA-BR-4366-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
1af0a9d5-1d19-4666-948c-9aecc7555368	TCGA-CG-4436-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	1af0a9d5-1d19-4666-948c-9aecc7555368_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_alignment	TCGA-CG-4436-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4436-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4436-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
86daa492-f2c2-470f-8efe-c08f0e5069a9	TCGA-CG-4476-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	86daa492-f2c2-470f-8efe-c08f0e5069a9_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_alignment	TCGA-CG-4476-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4476-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4476-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
b2b49a63-b59d-4dce-91e2-0d85c2720560	TCGA-CG-4304-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	b2b49a63-b59d-4dce-91e2-0d85c2720560_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_alignment	TCGA-CG-4304-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4304-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4304-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
8c87a1a6-301e-4f12-b5f2-3de6fa9ec658	TCGA-BR-4368-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	8c87a1a6-301e-4f12-b5f2-3de6fa9ec658_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_alignment	TCGA-BR-4368-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4368-01A-01R-1157-13_snv	bcgsc.ca.TCGA-BR-4368-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
690c5eb5-c5c0-434e-a229-11785474e112	TCGA-CG-4440-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	690c5eb5-c5c0-434e-a229-11785474e112_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_alignment	TCGA-CG-4440-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4440-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4440-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
4603cdae-b4bc-4557-bd7b-9f84516861a6	TCGA-CG-4465-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4603cdae-b4bc-4557-bd7b-9f84516861a6_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_alignment	TCGA-CG-4465-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4465-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4465-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
0c392e19-322b-4e2c-896f-198871324295	TCGA-BR-4369-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	0c392e19-322b-4e2c-896f-198871324295_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_alignment	TCGA-BR-4369-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4369-01A-01R-1157-13_snv	bcgsc.ca.TCGA-BR-4369-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
a0cb4623-90a4-40e4-8e92-6da47bee8c7d	TCGA-CG-4466-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	a0cb4623-90a4-40e4-8e92-6da47bee8c7d_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_alignment	TCGA-CG-4466-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4466-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4466-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d5779910-decd-40e6-b779-83f988956e82	TCGA-BR-4370-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d5779910-decd-40e6-b779-83f988956e82_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_alignment	TCGA-BR-4370-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4370-01A-01R-1157-13_snv	bcgsc.ca.TCGA-BR-4370-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
95698d6f-5687-4261-a6f4-30a349f74baf	TCGA-CG-4443-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	95698d6f-5687-4261-a6f4-30a349f74baf_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_alignment	TCGA-CG-4443-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4443-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4443-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0	TCGA-CG-4469-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	7e3bd01f-c9b9-4867-9315-0a5cddbb9dd0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_alignment	TCGA-CG-4469-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4469-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4469-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
29942ecb-05d0-46d0-b4f6-0252ea19b8a2	TCGA-BR-4361-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	29942ecb-05d0-46d0-b4f6-0252ea19b8a2_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_alignment	TCGA-BR-4361-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4361-01A-01R-1157-13_snv	bcgsc.ca.TCGA-BR-4361-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
d7f9513d-341c-46b9-ba45-e05eb5f19889	TCGA-BR-4371-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	d7f9513d-341c-46b9-ba45-e05eb5f19889_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_alignment	TCGA-BR-4371-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4371-01A-01R-1157-13_snv	bcgsc.ca.TCGA-BR-4371-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
e91f051f-8cba-4e4a-94c3-f3c07f1b4b79	TCGA-CG-4444-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	e91f051f-8cba-4e4a-94c3-f3c07f1b4b79_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_alignment	TCGA-CG-4444-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4444-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4444-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
99d614e6-e492-45d2-97b9-4d6a1373dd51	TCGA-BR-4362-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	99d614e6-e492-45d2-97b9-4d6a1373dd51_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_alignment	TCGA-BR-4362-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4362-01A-01R-1157-13_snv	bcgsc.ca.TCGA-BR-4362-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
322fec81-00af-45da-8769-b1339a040f46	TCGA-CG-4449-01A-01R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	322fec81-00af-45da-8769-b1339a040f46_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_alignment	TCGA-CG-4449-01A-01R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4449-01A-01R-1157-13_snv	bcgsc.ca.TCGA-CG-4449-01A-01R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
64ae6065-fbd5-48fc-a31c-caaef87bcc0b	TCGA-CG-4474-01A-02R-1157-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	64ae6065-fbd5-48fc-a31c-caaef87bcc0b_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_alignment	TCGA-CG-4474-01A-02R-1157-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-CG-4474-01A-02R-1157-13_snv	bcgsc.ca.TCGA-CG-4474-01A-02R-1157-13.bcgsc.ca.1.3.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
4ca0b265-4d75-49be-8fbe-84c39f8d0ce0	TCGA-BR-4294-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_alignment	TCGA-BR-4294-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:indel:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_indel	bcgsc.ca.TCGA-BR-4294-01A-01R-1131-13.bcgsc.ca.1.4.0.indel.vcf	yes	RNA Sequence-Indel	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
4ca0b265-4d75-49be-8fbe-84c39f8d0ce0	TCGA-BR-4294-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_alignment	TCGA-BR-4294-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_structural_variant	bcgsc.ca.TCGA-BR-4294-01A-01R-1131-13.bcgsc.ca.1.4.0.sv.vcf	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
4ca0b265-4d75-49be-8fbe-84c39f8d0ce0	TCGA-BR-4294-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_alignment	TCGA-BR-4294-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:structural_variant:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_structural_variant	bcgsc.ca.TCGA-BR-4294-01A-01R-1131-13.bcgsc.ca.1.4.0.sv.fa	yes	RNA Sequence-Structural variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
4ca0b265-4d75-49be-8fbe-84c39f8d0ce0	TCGA-BR-4294-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_alignment	TCGA-BR-4294-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:exon_expression:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_exon_expression	TCGA-BR-4294-01A-01R-1131-13.exon.quantification.txt	yes	Expression-Exon	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
4ca0b265-4d75-49be-8fbe-84c39f8d0ce0	TCGA-BR-4294-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_alignment	TCGA-BR-4294-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:gene_expression:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_gene_expression	TCGA-BR-4294-01A-01R-1131-13.gene.quantification.txt	yes	Expression-Gene	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
4ca0b265-4d75-49be-8fbe-84c39f8d0ce0	TCGA-BR-4294-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_alignment	TCGA-BR-4294-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:splice_junction_expression:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_splice_junction_expression	TCGA-BR-4294-01A-01R-1131-13.spljxn.quantification.txt	yes	Expression-Junction	Level 3	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_3.1.3.0
4ca0b265-4d75-49be-8fbe-84c39f8d0ce0	TCGA-BR-4294-01A-01R-1131-13	Total RNA	bcgsc.ca:reverse_transcription:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_reverse_transcription	bcgsc.ca:library_preparation:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_library_preparation	bcgsc.ca:RNA_Sequencing:IlluminaGA_RNASeq:01	4ca0b265-4d75-49be-8fbe-84c39f8d0ce0_RNA_Sequencing	->	https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/other/GAF/GAF3.0/gene.genome.v3_0.gaf	bcgsc.ca:consensus_mRNA:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_alignment	TCGA-BR-4294-01A-01R-1131-13_rnaseq.bam	GRCh37-lite	->	yes	RNA Sequence-Alignment	Level 1	bcgsc.ca:snv:IlluminaGA_RNASeq:01	TCGA-BR-4294-01A-01R-1131-13_snv	bcgsc.ca.TCGA-BR-4294-01A-01R-1131-13.bcgsc.ca.1.4.0.snv.vcf	yes	RNA Sequence-Single nucleotide variant	Level 2	bcgsc.ca_STAD.IlluminaGA_RNASeq.Level_2.1.4.0
