Information for 19-CAATCCCACT (Motif 33)


Reverse Opposite:

p-value:1e-3
log p-value:-8.339e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets118.3 +/- 59.9bp
Average Position of motif in Background87.1 +/- 47.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CAATCCCACT-----
NNAGTCCCACTCNNNN

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CAATCCCACT---
NNNTCCATCCCATAANN

PH0122.1_Obox2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CAATCCCACT--
ATAGTTAATCCCCCTCA

PH0137.1_Pitx1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CAATCCCACT--
NTTGTTAATCCCTCTNN

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CAATCCCACT--
NTAGTTAATCCCCTTAN

MA0038.1_Gfi1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAATCCCACT
CAAATCACTG-

PH0139.1_Pitx3/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CAATCCCACT
GNNAGCTAATCCCCCN

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CAATCCCACT--
ATAGTTAATCCCCCNNA

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAATCCCACT
AGATGCAATCCC---

MA0122.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CAATCCCACT---
----NCCACTTAN