Information for 5-TCCCCACATCTS (Motif 6)


Reverse Opposite:

p-value:1e-6
log p-value:-1.585e+01
Information Content per bp:1.808
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif5.66%
Number of Background Sequences with motif102.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets113.1 +/- 35.6bp
Average Position of motif in Background103.5 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCCCCACATCTS--
--ACCACATCCTGT

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCCCACATCTS
-ATCCAC-----

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCCCCACATCTS
NWAACCACADNN-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCCCCACATCTS
AAACCACAGC--

MA0103.2_ZEB1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCCCCACATCTS
---CCTCACCTG

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCCCCACATCTS
CTTATCTCHMCATCT-

MA0522.1_Tcf3/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCCCCACATCTS---
----CACAGCTGCAG

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCCCACATCTS-----
CCNNACCATCTGGCCTN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCCCCACATCTS
TCCCCA------

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCCCCACATCTS
----AACAGCTG