Information for 25-TTATTCTGATCA (Motif 38)


Reverse Opposite:

p-value:1e-1
log p-value:-4.348e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets131.0 +/- 26.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)6.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTATTCTGATCA-----
NTNTTCTTATCAGTNTN

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTATTCTGATCA
GTAATCDGATTA

PB0023.1_Gata6_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTATTCTGATCA-----
NNANTCTTATCTNNNNN

MA0468.1_DUX4/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTATTCTGATCA
-TAATTTAATCA

MA0036.2_GATA2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTATTCTGATCA--
AGATTCTTATCTGT

PH0017.1_Cux1_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTATTCTGATCA---
TAATGATGATCACTA

PH0016.1_Cux1_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTATTCTGATCA------
-TNAGNTGATCAACCGGT

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTATTCTGATCA--
----YCTTATCWVN

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTATTCTGATCA
NNTTTTGTTTTGATNT

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTATTCTGATCA
TAATTGTTCTAAAC-