Information for 4-ACAGTCCCTCCC (Motif 8)


Reverse Opposite:

p-value:1e-12
log p-value:-2.927e+01
Information Content per bp:1.782
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif187.5
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets101.6 +/- 56.0bp
Average Position of motif in Background101.5 +/- 53.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ACAGTCCCTCCC--
---GCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACAGTCCCTCCC---
-NAGCCCCGCCCCCN

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACAGTCCCTCCC
-CACTTCCTCT-

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACAGTCCCTCCC------
---GCCCCGCCCCCTCCC

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACAGTCCCTCCC-
---GCCCCGCCCC

MA0471.1_E2F6/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACAGTCCCTCCC
-NCTTCCCGCCC

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACAGTCCCTCCC
AGCAACAGCCGCACC-

PB0167.1_Sox13_2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACAGTCCCTCCC-----
ANNTNCCCACCCANNAC

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACAGTCCCTCCC----
NNAGTCCCACTCNNNN

MA0080.3_Spi1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAGTCCCTCCC---
NCACTTCCTCTTTTN