Information for 10-GTYTTTCATCYT (Motif 16)


Reverse Opposite:

p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.785
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif21.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets96.6 +/- 54.9bp
Average Position of motif in Background108.0 +/- 72.1bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTYTTTCATCYT-
NNTTTTTCTTATNT

MA0523.1_TCF7L2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTYTTTCATCYT-
TNCCTTTGATCTTN

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTYTTTCATCYT
TGTCTGDCACCT-

MA0152.1_NFATC2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTYTTTCATCYT
-TTTTCCA----

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTYTTTCATCYT
CTGTCTGTCACCT-

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTYTTTCATCYT
TTTTTTTTCNNGTN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTYTTTCATCYT
--ATTGCATCAT

POL002.1_INR/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GTYTTTCATCYT-
-----TCAGTCTT

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTYTTTCATCYT
TNCCTTTGATGT-

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTYTTTCATCYT--
NNTTCCTTTGATCTNNA