Information for 9-GTAGTCGT (Motif 33)


Reverse Opposite:

p-value:1e-5
log p-value:-1.348e+01
Information Content per bp:1.789
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.47%
Number of Background Sequences with motif759.8
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets93.2 +/- 48.0bp
Average Position of motif in Background98.4 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GTAGTCGT---
NNANTGGTGGTCTTNNN

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTCGT----
GNNATTTGTCGTAANN

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GTAGTCGT
GGTAAGTA-----

MA0027.1_En1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTAGTCGT-
AAGTAGTGCCC

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTAGTCGT----
ATGGAAAGTCGTAAAA

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAGTCGT-------
TAAAGTCGTAAAATAG

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAGTCGT-------
TAAAGTCGTAAAACGT

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAGTCGT------
CAAAGGCGTGGCCAG

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTAGTCGT-------
TAAAGTCGTAAAACAT

POL005.1_DPE/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTAGTCGT-
GAAGATGTT