Information for 5-ACGCAATC (Motif 28)


Reverse Opposite:

p-value:1e-5
log p-value:-1.293e+01
Information Content per bp:1.929
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif293.4
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets77.3 +/- 48.7bp
Average Position of motif in Background99.5 +/- 79.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACGCAATC-------
CGACCCAATCAACGGTG

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ACGCAATC
TBGCACGCAA--

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACGCAATC
TTATGCAAT-

MA0043.1_HLF/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ACGCAATC
GGTTACGCAATA

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGCAATC--
AGATGCAATCCC

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACGCAATC
CACGCA---

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACGCAATC------
AAGGCGAAATCATCGCA

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACGCAATC---
GCCGCCATCTTG

MA0468.1_DUX4/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACGCAATC-
TAATTTAATCA

MA0038.1_Gfi1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACGCAATC----
--CAAATCACTG