Information for 10-SRCGCCGGGMAG (Motif 13)


Reverse Opposite:

p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.837
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.59%
Number of Background Sequences with motif37.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets63.5 +/- 50.5bp
Average Position of motif in Background83.2 +/- 78.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--SRCGCCGGGMAG
AGCGCGCC------

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:SRCGCCGGGMAG-
---ANCCGGAAGT

MA0062.2_GABPA/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:SRCGCCGGGMAG----
-----CCGGAAGTGGC

MA0076.2_ELK4/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:SRCGCCGGGMAG---
----NCCGGAAGTGG

ETS(ETS)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:SRCGCCGGGMAG-
---AACCGGAAGT

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:SRCGCCGGGMAG-
---NACCGGAAGT

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:SRCGCCGGGMAG
--TTCCNGGAAG

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------SRCGCCGGGMAG
NNNNTTGGCGCCGANNN-

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:SRCGCCGGGMAG-
---AACCGGAAGT

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:SRCGCCGGGMAG
----ACCGGAAG