Information for 22-CGGTGGGCCC (Motif 35)


Reverse Opposite:

p-value:1e-5
log p-value:-1.345e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 25.2bp
Average Position of motif in Background94.1 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGGTGGGCCC----
NNNGGGGCGCCCCCNN

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CGGTGGGCCC---
NNANTGGTGGTCTTNNN

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGGTGGGCCC
CGTGGGTGGTCC-

MA0163.1_PLAG1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGGTGGGCCC-
CCCCCTTGGGCCCC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGTGGGCCC
DGGGYGKGGC-

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGTGGGCCC------
GGGTGTGCCCAAAAGG

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGGTGGGCCC
NTGGGTGTGGCC

MA0039.2_Klf4/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGTGGGCCC
TGGGTGGGGC-

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGGTGGGCCC
--GTGGAT--

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGGTGGGCCC
GGGCGGGACC