p-value: | 1e-6 |
log p-value: | -1.490e+01 |
Information Content per bp: | 1.869 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 2.56% |
Number of Background Sequences with motif | 164.9 |
Percentage of Background Sequences with motif | 0.34% |
Average Position of motif in Targets | 87.7 +/- 48.4bp |
Average Position of motif in Background | 99.0 +/- 56.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
MA0077.1_SOX9/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAACCAATGG -GAACAATGG |
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NFY(CCAAT)/Promoter/Homer
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAACCAATGG- -AGCCAATCGG |
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MA0515.1_Sox6/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAACCAATGG AAAACAATGG |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAACCAATGG- -GAACAATGGN |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAACCAATGG------- AATAAAGAACAATAGAATTTCA |
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IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAACCAATGG ACTGAAACCA---- |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAACCAATGG ACTAGCCAATCA |
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MA0038.1_Gfi1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAACCAATGG CAAATCACTG- |
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PB0067.1_Sox18_1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AAACCAATGG-- NNTNANAACAATTNNA |
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PB0036.1_Irf6_1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------AAACCAATGG CTGATCGAAACCAAAGT |
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