Information for 21-ACACGCAATC (Motif 34)


Reverse Opposite:

p-value:1e-5
log p-value:-1.346e+01
Information Content per bp:1.949
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets94.5 +/- 48.5bp
Average Position of motif in Background86.4 +/- 69.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--ACACGCAATC
TBGCACGCAA--

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACACGCAATC
-CACGCA---

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACACGCAATC--
AGATGCAATCCC

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACACGCAATC
NACAGGAAAT-

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACACGCAATC
TTATGCAAT-

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACACGCAATC-------
CGACCCAATCAACGGTG

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACACGCAATC
NACAGGAAAT-

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACACGCAATC
GCACGTAY--

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACACGCAATC
ATCACCCCAT-

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACACGCAATC------
AAGGCGAAATCATCGCA