Information for 22-GGAGACCAGGCG (Motif 31)


Reverse Opposite:

p-value:1e-4
log p-value:-1.044e+01
Information Content per bp:1.815
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.40%
Number of Background Sequences with motif85.6
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets113.7 +/- 39.8bp
Average Position of motif in Background97.9 +/- 71.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAGACCAGGCG-
NNNGTAACTANGNNA

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGAGACCAGGCG-----
NNTNGNNGTAACCAAGNNNNAGN

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGAGACCAGGCG--
NNAGGGACAAGGGCNC

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGAGACCAGGCG-
-----CTAGGCCT

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGAGACCAGGCG-
-----CNAGGCCT

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGAGACCAGGCG----
-AGCAACAGCCGCACC

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GGAGACCAGGCG
------CACGCA

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGAGACCAGGCG--
NNNNTGACCCGGCGCG

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGAGACCAGGCG
ACTGAAACCA----

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGAGACCAGGCG-
-----CCAGACAG