Information for 1-TAAGGCTTCTAC (Motif 1)


Reverse Opposite:

p-value:1e-12
log p-value:-2.846e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets168.3 +/- 20.7bp
Average Position of motif in Background111.9 +/- 49.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TAAGGCTTCTAC
----GCTTCC--

MA0164.1_Nr2e3/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TAAGGCTTCTAC
--AAGCTTG---

MA0109.1_Hltf/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TAAGGCTTCTAC
NNATAAGGNN-----

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TAAGGCTTCTAC
CNAGGCCT----

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TAAGGCTTCTAC-----
--AGNGTTCTAATGANN

MA0124.1_NKX3-1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TAAGGCTTCTAC
TAAGTAT-----

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TAAGGCTTCTAC
CAGATAAGGN------

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TAAGGCTTCTAC
-NGGGATTA---

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:TAAGGCTTCTAC--
--AGGTCTCTAACC

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----TAAGGCTTCTAC-
NNANTAACGGTTNNNAN