Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
PDF |
1 |  | Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-5 | -1.176e+01 | 0.0021 | 29.0 | 31.87% | 6224.9 | 13.77% | motif file (matrix) |
pdf |
2 |  | CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-4 | -9.613e+00 | 0.0088 | 18.0 | 19.78% | 3219.5 | 7.12% | motif file (matrix) |
pdf |
3 |  | c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.631e+00 | 0.0427 | 17.0 | 18.68% | 3449.7 | 7.63% | motif file (matrix) |
pdf |
4 |  | Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-3 | -7.582e+00 | 0.0427 | 22.0 | 24.18% | 5181.4 | 11.46% | motif file (matrix) |
pdf |
5 |  | bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.474e+00 | 0.0427 | 12.0 | 13.19% | 1958.1 | 4.33% | motif file (matrix) |
pdf |
6 |  | OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.209e+00 | 0.0427 | 4.0 | 4.40% | 199.4 | 0.44% | motif file (matrix) |
pdf |
7 |  | USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.722e+00 | 0.0454 | 14.0 | 15.38% | 2753.3 | 6.09% | motif file (matrix) |
pdf |
8 |  | Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-2 | -6.248e+00 | 0.0639 | 21.0 | 23.08% | 5355.1 | 11.85% | motif file (matrix) |
pdf |
9 |  | MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -6.063e+00 | 0.0682 | 21.0 | 23.08% | 5436.5 | 12.03% | motif file (matrix) |
pdf |
10 |  | Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.722e+00 | 0.0864 | 22.0 | 24.18% | 5975.5 | 13.22% | motif file (matrix) |
pdf |
11 |  | MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-2 | -5.663e+00 | 0.0864 | 17.0 | 18.68% | 4136.6 | 9.15% | motif file (matrix) |
pdf |
12 |  | Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.413e+00 | 0.0981 | 7.0 | 7.69% | 1013.4 | 2.24% | motif file (matrix) |
pdf |
13 |  | Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-2 | -5.343e+00 | 0.0981 | 11.0 | 12.09% | 2204.8 | 4.88% | motif file (matrix) |
pdf |
14 |  | HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-2 | -5.283e+00 | 0.0981 | 10.0 | 10.99% | 1907.1 | 4.22% | motif file (matrix) |
pdf |
15 |  | Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.110e+00 | 0.1062 | 15.0 | 16.48% | 3643.3 | 8.06% | motif file (matrix) |
pdf |
16 |  | Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-2 | -5.064e+00 | 0.1062 | 14.0 | 15.38% | 3307.5 | 7.32% | motif file (matrix) |
pdf |
17 |  | Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -4.969e+00 | 0.1079 | 19.0 | 20.88% | 5190.4 | 11.48% | motif file (matrix) |
pdf |
18 |  | Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -4.703e+00 | 0.1330 | 17.0 | 18.68% | 4558.1 | 10.08% | motif file (matrix) |
pdf |
19 |  | HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -4.686e+00 | 0.1330 | 11.0 | 12.09% | 2414.4 | 5.34% | motif file (matrix) |
pdf |