Information for 1-ACTTGCTGTGGG (Motif 1)


Reverse Opposite:

p-value:1e-15
log p-value:-3.484e+01
Information Content per bp:1.907
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets90.0 +/- 45.7bp
Average Position of motif in Background81.3 +/- 53.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ACTTGCTGTGGG
ACTTCCTGTT--

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGCTGTGGG
CCCCCTGCTGTG--

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACTTGCTGTGGG
CACTTCCTGT---

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACTTGCTGTGGG
CACTTCCTGT---

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGCTGTGGG-
TNTCCTGCTGTGNNG

MA0474.1_Erg/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGCTGTGGG
CCACTTCCTGT---

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGCTGTGGG-
TCNCCTGCTGNGNNN

MA0475.1_FLI1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGCTGTGGG
CCACTTCCTGT---

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGCTGTGGG-
NNTCCTGCTGTGNNN

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACTTGCTGTGGG
ATTTCCTGTN--