Information for 4-AGGGGTGTGCCC (Motif 7)


Reverse Opposite:

p-value:1e-10
log p-value:-2.432e+01
Information Content per bp:1.896
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets88.3 +/- 40.4bp
Average Position of motif in Background81.0 +/- 74.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGGGGTGTGCCC
NTGGGTGTGGCC

MA0493.1_Klf1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGGGGTGTGCCC
-TGGGTGTGGCN

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGGGGTGTGCCC------
--GGGTGTGCCCAAAAGG

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGGGGTGTGCCC
-DGGGYGKGGC-

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGGGGTGTGCCC
-TGGGTGTGGC-

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGTGTGCCC--
NNGCGTGTGTGCNGCN

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGGGGTGTGCCC
-TGGGTGGGGC-

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGGGGTGTGCCC
-GGGGNGGGGC-

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGGGTGTGCCC---
GCTGGGGGGTACCCCTT

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGTGTGCCC--
NNAGGGGCGGGGTNNA