Information for 5-GTGATGAAATAA (Motif 8)


Reverse Opposite:

p-value:1e-10
log p-value:-2.380e+01
Information Content per bp:1.759
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif263.2
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets84.8 +/- 51.9bp
Average Position of motif in Background106.5 +/- 54.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTGATGAAATAA
ATGATGCAAT--

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTGATGAAATAA
MTGATGCAAT--

PH0014.1_Cphx/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTGATGAAATAA--
ATGATCGAATCAAA

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTGATGAAATAA-----
AAGGCGAAATCATCGCA

PH0124.1_Obox5_1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTGATGAAATAA-
TAGAGGGATTAAATTTC

MA0466.1_CEBPB/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGATGAAATAA
ATTGTGCAATA-

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGATGAAATAA-
NANAGGGATTAATTATN

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGATGAAATAA
NACAGGAAAT--

MA0468.1_DUX4/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTGATGAAATAA
-TGATTAAATTA

PH0099.1_Lhx9/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTGATGAAATAA----
NGTNATTAATTAATGNG