p-value: | 1e-8 |
log p-value: | -1.974e+01 |
Information Content per bp: | 1.890 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 1.40% |
Number of Background Sequences with motif | 13.8 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 94.9 +/- 51.9bp |
Average Position of motif in Background | 81.7 +/- 51.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCTTAAGAGGCA -CTYRAGTGSY- |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTAAGAGGCA--- NTNNTTAAGTGGNTNAN |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TCTTAAGAGGCA --TTGAGTGSTT |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTAAGAGGCA-- AATNTTAAGTGGNTNN |
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PH0048.1_Hoxa13/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCTTAAGAGGCA- ANATTTTACGAGNNNN |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTAAGAGGCA--- NTNNTTAAGTGGTTANN |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTAAGAGGCA-- AATTTCAAGTGGCTTN |
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MA0063.1_Nkx2-5/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TCTTAAGAGGCA --TTAATTG--- |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCTTAAGAGGCA- NAATTTTACGAGNTNN |
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MA0503.1_Nkx2-5_(var.2)/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCTTAAGAGGCA -CTTGAGTGGCT |
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