Information for 9-TCTGCAGCAC (Motif 15)


Reverse Opposite:

p-value:1e-9
log p-value:-2.074e+01
Information Content per bp:1.899
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif9.89%
Number of Background Sequences with motif225.0
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets100.1 +/- 49.4bp
Average Position of motif in Background100.8 +/- 62.4bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCTGCAGCAC-
-TTGCAACATN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCAGCAC
VBSYGTCTGG-----

MA0133.1_BRCA1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTGCAGCAC
---ACAACAC

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCTGCAGCAC
TGAGTCAGCA----

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCTGCAGCAC
----CAGCC-

MA0142.1_Pou5f1::Sox2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCAGCAC----
ATTTGCATAACAAAG

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTGCAGCAC
ATTGCATCAK

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCTGCAGCAC
CTGTCTGG-----

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCTGCAGCAC
ATTGCATCAT

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TCTGCAGCAC---
NNGATCTAGAACCTNNN