Information for 21-GGGTGAGGTCTG (Motif 24)


Reverse Opposite:

p-value:1e-7
log p-value:-1.648e+01
Information Content per bp:1.807
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif83.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets125.8 +/- 45.0bp
Average Position of motif in Background99.1 +/- 55.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GGGTGAGGTCTG----
------GGTCTGGCAT

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGTGAGGTCTG------
-NNTNNTGTCTGGNNTNG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGGTGAGGTCTG-
-----AGGCCTNG

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGTGAGGTCTG
GGGGCCGAGGCCTG

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGTGAGGTCTG-
---VBSYGTCTGG

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGTGAGGTCTG
NTGGGTGTGGCC--

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGGTGAGGTCTG-
-----CTGTCTGG

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGAGGTCTG
TGGGTGTGGCN--

POL002.1_INR/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GGGTGAGGTCTG-
-----NNNANTGA

MA0145.2_Tcfcp2l1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGAGGTCTG-
CTGGNTNNAACTGG