Information for 7-TAAAGGACAT (Motif 15)


Reverse Opposite:

p-value:1e-10
log p-value:-2.506e+01
Information Content per bp:1.632
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif375.3
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets123.4 +/- 45.2bp
Average Position of motif in Background102.7 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TAAAGGACAT
ANGNAAAGGTCA-

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TAAAGGACAT---
TCTCAAAGGTCACGAG

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TAAAGGACAT---
TCTCAAAGGTCACCTG

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAAAGGACAT
TCAAGGTCAN

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TAAAGGACAT----
TATTCAAGGTCATGCGA

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAAAGGACAT
CAAAGGTCAG

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAGGACAT
TGGGGCAAAGGTCA-

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAAAGGACAT
NACAGGAAAT

MA0141.2_Esrrb/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAAAGGACAT
AGCTCAAGGTCA-

MA0512.1_Rxra/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAAAGGACAT-
CAAAGGTCAGA