Information for 3-CCCCWCCCCGSC (Motif 3)


Reverse Opposite:

p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.822
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif14.15%
Number of Background Sequences with motif993.5
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets99.6 +/- 55.0bp
Average Position of motif in Background98.5 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)4.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0599.1_KLF5/Jaspar

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CCCCWCCCCGSC
GCCCCGCCCC---

MA0079.3_SP1/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CCCCWCCCCGSC
GCCCCGCCCCC--

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CCCCWCCCCGSC--
ATCCCCGCCCCTAAAA

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CCCCWCCCCGSC
CCCCCCCC----

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCCCWCCCCGSC--
GCCCCGCCCCCTCCC

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----CCCCWCCCCGSC
CTATCCCCGCCCTATT

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CCCCWCCCCGSC
GCCCCACCCA---

MA0162.2_EGR1/Jaspar

Match Rank:8
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCCCWCCCCGSC-
CCCCCGCCCCCGCC

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCCCWCCCCGSC
NAGCCCCGCCCCCN-

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCCCWCCCCGSC
GGCCCCGCCCCC--