Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
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1 |  | Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-11 | -2.633e+01 | 0.0000 | 136.0 | 31.63% | 8754.1 | 17.86% | motif file (matrix) |
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2 |  | Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-8 | -1.864e+01 | 0.0000 | 80.0 | 18.60% | 4701.9 | 9.59% | motif file (matrix) |
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3 |  | Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-6 | -1.599e+01 | 0.0000 | 104.0 | 24.19% | 7162.2 | 14.62% | motif file (matrix) |
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4 |  | Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-6 | -1.390e+01 | 0.0001 | 108.0 | 25.12% | 7859.3 | 16.04% | motif file (matrix) |
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5 |  | NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.282e+01 | 0.0001 | 57.0 | 13.26% | 3410.3 | 6.96% | motif file (matrix) |
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6 |  | Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-4 | -1.130e+01 | 0.0005 | 98.0 | 22.79% | 7348.5 | 15.00% | motif file (matrix) |
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7 |  | Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-4 | -1.093e+01 | 0.0007 | 57.0 | 13.26% | 3639.2 | 7.43% | motif file (matrix) |
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8 |  | Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-4 | -1.082e+01 | 0.0007 | 109.0 | 25.35% | 8508.2 | 17.36% | motif file (matrix) |
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9 |  | Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-4 | -1.041e+01 | 0.0009 | 91.0 | 21.16% | 6839.4 | 13.96% | motif file (matrix) |
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10 |  | SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-4 | -9.221e+00 | 0.0026 | 221.0 | 51.40% | 20757.8 | 42.36% | motif file (matrix) |
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11 |  | FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-3 | -9.115e+00 | 0.0026 | 61.0 | 14.19% | 4253.0 | 8.68% | motif file (matrix) |
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12 |  | HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-3 | -8.857e+00 | 0.0031 | 28.0 | 6.51% | 1473.2 | 3.01% | motif file (matrix) |
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13 |  | Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-3 | -7.859e+00 | 0.0078 | 88.0 | 20.47% | 7054.0 | 14.39% | motif file (matrix) |
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14 |  | NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.591e+00 | 0.0095 | 99.0 | 23.02% | 8209.2 | 16.75% | motif file (matrix) |
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15 |  | MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer | 1e-3 | -7.497e+00 | 0.0098 | 94.0 | 21.86% | 7730.2 | 15.77% | motif file (matrix) |
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16 |  | FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.455e+00 | 0.0098 | 69.0 | 16.05% | 5292.0 | 10.80% | motif file (matrix) |
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17 |  | Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -7.439e+00 | 0.0098 | 69.0 | 16.05% | 5294.2 | 10.80% | motif file (matrix) |
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18 |  | Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.436e+00 | 0.0098 | 62.0 | 14.42% | 4630.6 | 9.45% | motif file (matrix) |
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19 |  | Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-3 | -6.941e+00 | 0.0134 | 68.0 | 15.81% | 5298.9 | 10.81% | motif file (matrix) |
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20 |  | Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.831e+00 | 0.0143 | 135.0 | 31.40% | 12126.3 | 24.74% | motif file (matrix) |
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21 |  | STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer | 1e-2 | -6.792e+00 | 0.0143 | 26.0 | 6.05% | 1519.2 | 3.10% | motif file (matrix) |
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22 |  | Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -6.707e+00 | 0.0147 | 149.0 | 34.65% | 13651.8 | 27.86% | motif file (matrix) |
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23 |  | Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.644e+00 | 0.0149 | 51.0 | 11.86% | 3744.4 | 7.64% | motif file (matrix) |
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24 |  | Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-2 | -6.577e+00 | 0.0153 | 59.0 | 13.72% | 4509.8 | 9.20% | motif file (matrix) |
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25 |  | Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.485e+00 | 0.0161 | 36.0 | 8.37% | 2409.1 | 4.92% | motif file (matrix) |
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26 |  | Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -6.458e+00 | 0.0161 | 18.0 | 4.19% | 920.9 | 1.88% | motif file (matrix) |
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27 |  | OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.406e+00 | 0.0161 | 16.0 | 3.72% | 775.3 | 1.58% | motif file (matrix) |
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28 |  | Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer | 1e-2 | -6.343e+00 | 0.0166 | 11.0 | 2.56% | 431.0 | 0.88% | motif file (matrix) |
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29 |  | SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.270e+00 | 0.0172 | 56.0 | 13.02% | 4284.4 | 8.74% | motif file (matrix) |
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30 |  | HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -6.216e+00 | 0.0176 | 43.0 | 10.00% | 3080.3 | 6.29% | motif file (matrix) |
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31 |  | AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.036e+00 | 0.0204 | 45.0 | 10.47% | 3295.8 | 6.73% | motif file (matrix) |
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32 |  | Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -6.018e+00 | 0.0204 | 21.0 | 4.88% | 1196.4 | 2.44% | motif file (matrix) |
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33 |  | Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.592e+00 | 0.0298 | 30.0 | 6.98% | 2009.2 | 4.10% | motif file (matrix) |
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34 |  | MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -5.440e+00 | 0.0337 | 57.0 | 13.26% | 4553.4 | 9.29% | motif file (matrix) |
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35 |  | TATA-Box(TBP)/Promoter/Homer | 1e-2 | -5.340e+00 | 0.0362 | 72.0 | 16.74% | 6057.0 | 12.36% | motif file (matrix) |
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36 |  | Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.155e+00 | 0.0423 | 14.0 | 3.26% | 728.5 | 1.49% | motif file (matrix) |
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37 |  | BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-2 | -4.981e+00 | 0.0490 | 77.0 | 17.91% | 6657.6 | 13.59% | motif file (matrix) |
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38 |  | AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-2 | -4.890e+00 | 0.0523 | 76.0 | 17.67% | 6581.5 | 13.43% | motif file (matrix) |
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39 |  | Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-2 | -4.833e+00 | 0.0539 | 14.0 | 3.26% | 757.5 | 1.55% | motif file (matrix) |
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40 |  | STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer | 1e-2 | -4.820e+00 | 0.0539 | 36.0 | 8.37% | 2678.8 | 5.47% | motif file (matrix) |
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41 |  | HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-2 | -4.759e+00 | 0.0552 | 60.0 | 13.95% | 5008.2 | 10.22% | motif file (matrix) |
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