p-value: | 1e-7 |
log p-value: | -1.732e+01 |
Information Content per bp: | 1.759 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 5.49% |
Number of Background Sequences with motif | 42.8 |
Percentage of Background Sequences with motif | 0.09% |
Average Position of motif in Targets | 81.2 +/- 37.9bp |
Average Position of motif in Background | 106.9 +/- 69.1bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PH0061.1_Hoxb6/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAGGAGTHATTA---- TATTGGTAATTACCTT |
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PH0055.1_Hoxa7_2/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TAGGAGTHATTA------ --GTAGTAATTAATGGAA |
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PH0062.1_Hoxb7/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TAGGAGTHATTA------ --GTAGTAATTAATGCAA |
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PH0072.1_Hoxc8/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAGGAGTHATTA---- TTGGGGTAATTAACGT |
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MF0010.1_Homeobox_class/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TAGGAGTHATTA ----AATAATT- |
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PH0039.1_Mnx1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TAGGAGTHATTA------ --GTACTAATTAGTGGCG |
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PH0106.1_Msx1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TAGGAGTHATTA------ --NNATTAATTAGTNGNN |
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PH0019.1_Dbx2/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TAGGAGTHATTA------ --NAATTAATTAATTNNN |
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PH0120.1_Nkx6-3/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TAGGAGTHATTA------ -CNNANTAATTAATTNNC |
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PH0008.1_Barx2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TAGGAGTHATTA---- NANAANTAATTANTTA |
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