Information for 7-GCCGCCTG (Motif 31)


Reverse Opposite:

p-value:1e-6
log p-value:-1.465e+01
Information Content per bp:1.895
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif8.61%
Number of Background Sequences with motif1981.5
Percentage of Background Sequences with motif4.12%
Average Position of motif in Targets98.4 +/- 46.0bp
Average Position of motif in Background100.2 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCCGCCTG--
NNCACCTGNN

MA0461.1_Atoh1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCCGCCTG
GCCATCTG

MA0155.1_INSM1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCTG---
CGCCCCCTGACA

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------GCCGCCTG-----
CNNBRGCGCCCCCTGSTGGC

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCCTG----
NNGTCGCGTGNCAC

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCGCCTG--
GCCATCTGTT

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCTG----
TACGCCCCGCCACTCTG

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCCGCCTG--
----GCTGTG

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GCCGCCTG---
GGTCCCGCCCCCTTCTC

MA0104.3_Mycn/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCGCCTG
GCCACGTG