Information for 5-ATTTTCTTTG (Motif 12)


Reverse Opposite:

p-value:1e-10
log p-value:-2.319e+01
Information Content per bp:1.880
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif9.89%
Number of Background Sequences with motif169.2
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets101.4 +/- 35.6bp
Average Position of motif in Background102.2 +/- 76.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTTTCTTTG
ATTTCCTGTN

PB0083.1_Tcf7_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTTTCTTTG-------
NNTTCCTTTGATCTNNA

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATTTTCTTTG---
NNTGTTTATTTTGGCA

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTTTCTTTG-------
NNTTCCTTTGATCTANA

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATTTTCTTTG-------
-ANTCCTTTGTCTNNNN

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTCTTTG---
NNAATTTTATTGGNTN

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTCTTTG
TGTTTACTTT-

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATTTTCTTTG-------
ATTTCCTTTGATCTATA

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATTTTCTTTG
ATTTCCTGTN

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATTTTCTTTG---
NNNNTTTTTTTTTNAAC