Information for 14-TTCCAAGAAGTA (Motif 17)


Reverse Opposite:

p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.786
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif97.1
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets107.7 +/- 55.5bp
Average Position of motif in Background97.7 +/- 53.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TTCCAAGAAGTA
ATTTCCAAGAA---

MA0144.2_STAT3/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAAGAAGTA
TTTCCCAGAAN--

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAAGAAGTA
TTTCTNAGAAAN-

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TTCCAAGAAGTA
NATTTCCNGGAAAT-

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAAGAAGTA
TTTCCNGGAAAN-

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TTCCAAGAAGTA
NNCTTCCNGGAAGN-

MA0518.1_Stat4/Jaspar

Match Rank:7
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTCCAAGAAGTA
NNNTTTCCTGGAAA--

MA0137.3_STAT1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAAGAAGTA
TTTCCTGGAAA--

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTCCAAGAAGTA
TTCCNGGAAG--

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TTCCAAGAAGTA
NNNCTTTCCAGGAAA--