p-value: | 1e-8 |
log p-value: | -1.868e+01 |
Information Content per bp: | 1.894 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 4.72% |
Number of Background Sequences with motif | 29.4 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 105.8 +/- 55.4bp |
Average Position of motif in Background | 94.3 +/- 55.5bp |
Strand Bias (log2 ratio + to - strand density) | -2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTCGCTATT- AGGTCTCTAACC |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGTCGCTATT--- NCCGTTGCTANGNGN |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGTCGCTATT--- NNCGTTGCTATGGNN |
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Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGTCGCTATT----- -----CTATTTTTGG |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GGTCGCTATT------- NTNNNNNGTTGCTANGGNNCANA |
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Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGTCGCTATT------ ----KCTATTTTTRGH |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGTCGCTATT- CTGTTGCTAGGS |
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MA0132.1_Pdx1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGTCGCTATT- -----CTAATT |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTCGCTATT AGGTCA----- |
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MA0158.1_HOXA5/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGTCGCTATT- ---CACTAATT |
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