Information for 7-AGATAAATACTG (Motif 10)


Reverse Opposite:

p-value:1e-9
log p-value:-2.275e+01
Information Content per bp:1.763
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif281.4
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets105.3 +/- 48.9bp
Average Position of motif in Background99.1 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGATAAATACTG
AAATAAACA---

MA0153.1_HNF1B/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGATAAATACTG-
-GTTAAATATTAA

MA0030.1_FOXF2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGATAAATACTG
CAAACGTAAACAAT-

MA0037.2_GATA3/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGATAAATACTG
AGATAAGA----

MA0035.3_Gata1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGATAAATACTG
ANAGATAAGAA---

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGATAAATACTG--
AAAAAGTAAACAAACAC

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGATAAATACTG
AAAGTAAACA---

PH0045.1_Hoxa1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGATAAATACTG-
CTGAGCTAATTACCGT

POL002.1_INR/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGATAAATACTG-
-----NNNANTGA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGATAAATACTG
AGATAASR----