Homer Known Motif Enrichment Results (All_v1)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 627, Total Background Sequences = 48156
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-11-2.626e+010.0000183.029.19%8634.417.93%motif file (matrix) pdf
2Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-10-2.453e+010.0000120.019.14%4942.810.27%motif file (matrix) pdf
3Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-8-1.902e+010.0000150.023.92%7285.215.13%motif file (matrix) pdf
4NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-8-1.846e+010.000089.014.19%3637.07.55%motif file (matrix) pdf
5Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-7-1.740e+010.0000217.034.61%11949.424.82%motif file (matrix) pdf
6Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-7-1.679e+010.0000146.023.29%7282.515.13%motif file (matrix) pdf
7Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-6-1.446e+010.0000133.021.21%6726.613.97%motif file (matrix) pdf
8Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-5-1.357e+010.0000142.022.65%7427.615.43%motif file (matrix) pdf
9Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-5-1.249e+010.000195.015.15%4553.39.46%motif file (matrix) pdf
10Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-5-1.245e+010.0001131.020.89%6856.714.24%motif file (matrix) pdf
11Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-4-1.048e+010.0007106.016.91%5498.211.42%motif file (matrix) pdf
12SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-4-1.045e+010.0007324.051.67%20991.543.60%motif file (matrix) pdf
13Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer1e-4-1.037e+010.000747.07.50%1907.83.96%motif file (matrix) pdf
14Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-4-1.018e+010.000772.011.48%3393.47.05%motif file (matrix) pdf
15Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-4-1.000e+010.0008214.034.13%12979.026.96%motif file (matrix) pdf
16FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-4-9.786e+000.000977.012.28%3745.57.78%motif file (matrix) pdf
17Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-4-9.552e+000.001148.07.66%2031.04.22%motif file (matrix) pdf
18NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-4-9.395e+000.0012146.023.29%8331.717.30%motif file (matrix) pdf
19OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-4-9.235e+000.001421.03.35%622.31.29%motif file (matrix) pdf
20FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-3-9.164e+000.001491.014.51%4709.79.78%motif file (matrix) pdf
21HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer1e-3-9.132e+000.001457.09.09%2597.75.40%motif file (matrix) pdf
22MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-3-9.086e+000.001492.014.67%4784.19.94%motif file (matrix) pdf
23TATA-Box(TBP)/Promoter/Homer1e-3-8.711e+000.0019100.015.95%5358.911.13%motif file (matrix) pdf
24Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-3-8.593e+000.0020291.046.41%18937.539.33%motif file (matrix) pdf
25HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer1e-3-8.528e+000.002142.06.70%1776.93.69%motif file (matrix) pdf
26Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-3-8.459e+000.002223.03.67%757.21.57%motif file (matrix) pdf
27MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-3-8.259e+000.002568.010.85%3367.46.99%motif file (matrix) pdf
28BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-3-8.188e+000.0026115.018.34%6437.313.37%motif file (matrix) pdf
29Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-3-7.993e+000.003153.08.45%2475.95.14%motif file (matrix) pdf
30Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-3-7.842e+000.003576.012.12%3927.58.16%motif file (matrix) pdf
31Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer1e-3-7.723e+000.0038125.019.94%7196.414.95%motif file (matrix) pdf
32Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-3-7.677e+000.003829.04.63%1118.82.32%motif file (matrix) pdf
33MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-3-7.545e+000.0042129.020.57%7503.315.58%motif file (matrix) pdf
34HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer1e-3-7.456e+000.004545.07.18%2051.14.26%motif file (matrix) pdf
35STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-3-7.455e+000.004549.07.81%2291.84.76%motif file (matrix) pdf
36Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-3-7.261e+000.005269.011.00%3559.77.39%motif file (matrix) pdf
37Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-3-6.978e+000.006760.09.57%3026.06.28%motif file (matrix) pdf
38Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-2-6.847e+000.0074103.016.43%5862.412.18%motif file (matrix) pdf
39NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer1e-2-6.767e+000.007837.05.90%1646.63.42%motif file (matrix) pdf
40Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-2-6.622e+000.008876.012.12%4104.88.53%motif file (matrix) pdf
41Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-2-6.381e+000.0109112.017.86%6562.513.63%motif file (matrix) pdf
42AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-2-6.300e+000.0115110.017.54%6441.413.38%motif file (matrix) pdf
43AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-6.199e+000.012553.08.45%2686.35.58%motif file (matrix) pdf
44Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-2-5.903e+000.016448.07.66%2410.95.01%motif file (matrix) pdf
45Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-2-5.895e+000.0164101.016.11%5905.412.27%motif file (matrix) pdf
46Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-2-5.869e+000.016422.03.51%868.31.80%motif file (matrix) pdf
47Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-2-5.560e+000.021619.03.03%728.01.51%motif file (matrix) pdf
48Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-2-5.544e+000.021679.012.60%4482.19.31%motif file (matrix) pdf
49Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-2-5.507e+000.021915.02.39%520.81.08%motif file (matrix) pdf
50Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-2-5.458e+000.022517.02.71%627.81.30%motif file (matrix) pdf
51HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer1e-2-5.307e+000.025778.012.44%4458.49.26%motif file (matrix) pdf
52HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer1e-2-5.165e+000.029089.014.19%5231.510.87%motif file (matrix) pdf
53FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-2-5.088e+000.030734.05.42%1641.93.41%motif file (matrix) pdf
54AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-2-5.069e+000.030769.011.00%3898.78.10%motif file (matrix) pdf
55Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-2-5.000e+000.032457.09.09%3116.26.47%motif file (matrix) pdf
56Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-2-4.974e+000.0326135.021.53%8485.117.62%motif file (matrix) pdf
57BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-2-4.971e+000.032645.07.18%2344.24.87%motif file (matrix) pdf
58Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer1e-2-4.867e+000.0350182.029.03%11898.624.71%motif file (matrix) pdf
59STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-2-4.849e+000.035130.04.78%1424.72.96%motif file (matrix) pdf
60Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer1e-2-4.825e+000.0353129.020.57%8097.316.82%motif file (matrix) pdf
61Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-2-4.790e+000.036036.05.74%1800.33.74%motif file (matrix) pdf
62Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer1e-2-4.757e+000.036633.05.26%1618.13.36%motif file (matrix) pdf
63p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer1e-2-4.696e+000.038325.03.99%1140.22.37%motif file (matrix) pdf