Information for 8-CTGAGGGCCCAG (Motif 11)


Reverse Opposite:

p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.890
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif27.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets77.1 +/- 50.2bp
Average Position of motif in Background109.8 +/- 51.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGGGCCCAG
CTTGAGTGGCT--

MA0003.2_TFAP2A/Jaspar

Match Rank:2
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTGAGGGCCCAG
CATTGCCTCAGGGCA---

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGGGCCCAG
GCCTCAGGGCAT--

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAGGGCCCAG
WTGSCCTSAGGS-----

MA0524.1_TFAP2C/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGGGCCCAG
TGCCCTGGGGCNANN-

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGGGCCCAG
GGTTAGAGACCT-

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGAGGGCCCAG
TTGAGTGSTT--

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGGGCCCAG--
NNNGGGGCGCCCCCNN

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGAGGGCCCAG
GCTGTG-------

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CTGAGGGCCCAG
----AGGCCTAG