Information for 10-AACRTCTGTH (Motif 19)


Reverse Opposite:

p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.520
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.47%
Number of Background Sequences with motif460.3
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets78.2 +/- 56.4bp
Average Position of motif in Background102.6 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AACRTCTGTH
CGACCATCTGTT

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AACRTCTGTH
BAACAGCTGT-

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AACRTCTGTH
AACAGCTG--

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AACRTCTGTH
NNAGCAGCTGCT

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AACRTCTGTH---
CCNNACCATCTGGCCTN

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AACRTCTGTH
CAGCAGCTGN-

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AACRTCTGTH
NAACAGCTGT-

MA0521.1_Tcf12/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AACRTCTGTH-
AACAGCTGCAG

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AACRTCTGTH--
NVCAGCTGBBNN

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACRTCTGTH
ANCAGCTG--