Information for 7-GAGTCACAAGCA (Motif 7)


Reverse Opposite:

p-value:1e-11
log p-value:-2.754e+01
Information Content per bp:1.852
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif8.79%
Number of Background Sequences with motif63.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets72.5 +/- 53.8bp
Average Position of motif in Background89.1 +/- 59.2bp
Strand Bias (log2 ratio + to - strand density)-2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0099.2_JUN::FOS/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GAGTCACAAGCA
TGAGTCA------

MA0477.1_FOSL1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCACAAGCA
NATGAGTCACC----

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCACAAGCA
GATGAGTCAT-----

MA0476.1_FOS/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCACAAGCA
NATGAGTCANN----

MA0491.1_JUND/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCACAAGCA
NATGAGTCACN----

MA0490.1_JUNB/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCACAAGCA
ATGAGTCATCN---

PB0142.1_Jundm2_2/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------GAGTCACAAGCA
ATTGATGAGTCACCAA--

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GAGTCACAAGCA
NNATGAGTCATN----

MA0478.1_FOSL2/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCACAAGCA
NTGAGTCATCN---

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GAGTCACAAGCA
DATGASTCATHN---