Information for 2-TGAATGAATC (Motif 6)


Reverse Opposite:

p-value:1e-10
log p-value:-2.479e+01
Information Content per bp:1.640
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif18.60%
Number of Background Sequences with motif4116.4
Percentage of Background Sequences with motif8.40%
Average Position of motif in Targets108.6 +/- 58.4bp
Average Position of motif in Background99.2 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----TGAATGAATC--
ACTATGAATGAATGAT

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGAATGAATC-
TAATTCAATGAAGTG

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGAATGAATC
GKTAATGR---

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATGAATC
NNTNTCATGAATGT---

MA0462.1_BATF::JUN/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGAATGAATC-
GAAATGACTCA

PH0019.1_Dbx2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TGAATGAATC-
TTTAATTAATTAATTC

MA0476.1_FOS/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGAATGAATC---
--NATGAGTCANN

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGAATGAATC----
NNNTATTGAATTGNNN

PH0150.1_Pou4f3/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGAATGAATC-
AGTTATTAATGAGGTC

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGAATGAATC-----
NTTNTATGAATGTGNNC