Information for 15-ACCCTGTGGGCT (Motif 21)


Reverse Opposite:

p-value:1e-10
log p-value:-2.306e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets131.0 +/- 33.7bp
Average Position of motif in Background120.0 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0002.2_RUNX1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACCCTGTGGGCT
-GTCTGTGGTTT

MA0524.1_TFAP2C/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACCCTGTGGGCT--
TGCCCTGGGGCNANN

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACCCTGTGGGCT-
TCACCTCTGGGCAG

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACCCTGTGGGCT-
-NNHTGTGGTTWN

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACCCTGTGGGCT-
-SCCTSAGGSCAW

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACCCTGTGGGCT-
---CTGTGGTTTN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACCCTGTGGGCT
--GCTGTGGTTT

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACCCTGTGGGCT
ATGCCCTGAGGC--

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACCCTGTGGGCT
--GCTGTG----

MA0003.2_TFAP2A/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACCCTGTGGGCT
CATTGCCTCAGGGCA