Information for 13-ACAAGCCTTA (Motif 25)


Reverse Opposite:

p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.827
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif39.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets140.4 +/- 50.0bp
Average Position of motif in Background97.3 +/- 62.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ACAAGCCTTA-
NNGGCCACGCCTTTN

MA0109.1_Hltf/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACAAGCCTTA---
---AACCTTATAT

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACAAGCCTTA
NNACTTGCCTT-

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACAAGCCTTA----
----NCCTTATCTG

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ACAAGCCTTA----
----NNCTTATCTN

PB0023.1_Gata6_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACAAGCCTTA--------
-NNANTCTTATCTNNNNN

MA0482.1_Gata4/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACAAGCCTTA------
-----TCTTATCTCCC

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACAAGCCTTA
CNAGGCCT--

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:ACAAGCCTTA-----
-----YCTTATCWVN

MA0164.1_Nr2e3/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ACAAGCCTTA
-CAAGCTT--