p-value: | 1e-2 |
log p-value: | -5.663e+00 |
Information Content per bp: | 1.683 |
Number of Target Sequences with motif | 63.0 |
Percentage of Target Sequences with motif | 14.65% |
Number of Background Sequences with motif | 5088.6 |
Percentage of Background Sequences with motif | 10.38% |
Average Position of motif in Targets | 119.0 +/- 59.5bp |
Average Position of motif in Background | 100.0 +/- 57.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 1 |
Score: | 0.76 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AATCATAAAA- -GTCATAAAAN |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 2 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AATCATAAAA NCYAATAAAA |
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MA0465.1_CDX2/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AATCATAAAA AAGCCATAAAA |
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PH0064.1_Hoxb9/Jaspar
Match Rank: | 4 |
Score: | 0.73 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AATCATAAAA---- AGAGCCATAAAATTCG |
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PH0047.1_Hoxa11/Jaspar
Match Rank: | 5 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AATCATAAAA--- TAAAGTCGTAAAACAT |
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PH0065.1_Hoxc10/Jaspar
Match Rank: | 6 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AATCATAAAA--- TAAAGTCGTAAAACGT |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 7 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AATCATAAAA--- AAAGCTCGTAAAATTT |
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PH0078.1_Hoxd13/Jaspar
Match Rank: | 8 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AATCATAAAA---- CTACCAATAAAATTCT |
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PH0066.1_Hoxc11/Jaspar
Match Rank: | 9 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AATCATAAAA--- TAAAGTCGTAAAATAG |
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PH0076.1_Hoxd11/Jaspar
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AATCATAAAA---- TAAGGTCGTAAAATCCT |
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