Information for 22-ACTGCGGCGTCT (Motif 32)


Reverse Opposite:

p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.768
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif171.0
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets98.8 +/- 53.2bp
Average Position of motif in Background105.0 +/- 53.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCGGCGTCT----
NNNTNGGGCGTATNNTN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ACTGCGGCGTCT--
----VBSYGTCTGG

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCGGCGTCT---
NTNTGGGGGGTCNNNA

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACTGCGGCGTCT
GCTGTG------

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ACTGCGGCGTCT--
------CTGTCTGG

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACTGCGGCGTCT
GTCTGTGGTTT--

MA0018.2_CREB1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ACTGCGGCGTCT
----TGACGTCA

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ACTGCGGCGTCT
ATTGCCTGAGGCAAT-

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCGGCGTCT
TGCCCTGGGGCNANN

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:ACTGCGGCGTCT------
---GGNGCGNCTGTTNNN