Information for 16-GCCCCGGGGG (Motif 26)


Reverse Opposite:

p-value:1e-6
log p-value:-1.394e+01
Information Content per bp:1.832
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif1198.9
Percentage of Background Sequences with motif2.65%
Average Position of motif in Targets103.1 +/- 51.8bp
Average Position of motif in Background97.9 +/- 65.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0102.1_Zic2_1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGGGGG---
CCCCCCCGGGGGGGT

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGGGGG---
CCCCCCCGGGGGGGT

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCCCCGGGGG--
TCCCCTGGGGAC

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGGGGG--
CACCCCCGGGGGGG

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGGGGG--
TTGCCCTAGGGCAT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGGGGG--
ATTGCCTGAGGCGAA

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGGGGG--
ATTCCCTGAGGGGAA

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCCCCGGGGG--
NTNGCCTCAGGCNNN

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCGGGGG----
TGCCCTGGGGCNANN

MA0154.2_EBF1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCCCCGGGGG--
-TCCCTGGGGAN