Information for 19-AAACGCACAGGC (Motif 26)


Reverse Opposite:

p-value:1e-7
log p-value:-1.838e+01
Information Content per bp:1.900
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets130.1 +/- 43.8bp
Average Position of motif in Background105.5 +/- 56.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAACGCACAGGC--
---TGCGCAGGCGC

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAACGCACAGGC--
ACATGCCCGGGCAT

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAACGCACAGGC
-----CACAGN-

MA0002.2_RUNX1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAACGCACAGGC
-AAACCACAGAN

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAACGCACAGGC----
AGCGGCACACACGCAA

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AAACGCACAGGC-
AAGCATACGCCCAACTT

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAACGCACAGGC-
-YCCGCCCACGCN

MA0058.2_MAX/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAACGCACAGGC
--AAGCACATGG

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AAACGCACAGGC----
----GCGCATGCGCAG

MA0146.2_Zfx/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:AAACGCACAGGC---------
-------CAGGCCNNGGCCNN