Information for 6-CGCGTGGGCCGG (Motif 8)


Reverse Opposite:

p-value:1e-5
log p-value:-1.294e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.0 +/- 38.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGCGTGGGCCGG
NGCGTGGGCGGR

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTGGGCCGG--
GTGCGTGGGCGGGNG

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGCGTGGGCCGG
ANTGCGGGGGCGGN

MA0162.2_EGR1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCGTGGGCCGG--
GGCGGGGGCGGGGG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCGTGGGCCGG
TGCGTG------

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCGTGGGCCGG
TGCGTGGGYG--

MA0506.1_NRF1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGCGTGGGCCGG
GCGCCTGCGCA--

PB0043.1_Max_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGCGTGGGCCGG
TGACCACGTGGTCGGG

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCGTGGGCCGG
CACGTGGN----

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGCGTGGGCCGG-
NNGCGTGTGTGCNGCN