Information for 6-ACACCCGCCA (Motif 14)


Reverse Opposite:

p-value:1e-10
log p-value:-2.508e+01
Information Content per bp:1.839
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.71%
Number of Background Sequences with motif141.7
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets91.7 +/- 47.4bp
Average Position of motif in Background102.5 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ACACCCGCCA-----
TACGCCCCGCCACTCTG

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ACACCCGCCA
AGCGGCACACACGCAA

MA0493.1_Klf1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACACCCGCCA
GGCCACACCCA---

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACACCCGCCA
NNCACCTGNN-

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACACCCGCCA
GGCCACACCCAN--

MA0469.1_E2F3/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACACCCGCCA------
-CTCCCGCCCCCACTC

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACACCCGCCA----
TCGTACCCGCATCATT

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACACCCGCCA
GCCACACCCA---

MA0131.1_HINFP/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACACCCGCCA
TAACGTCCGC--

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACACCCGCCA
-YAACBGCC-