Information for 12-CGTCAGGATT (Motif 23)


Reverse Opposite:

p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.847
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif55.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets72.7 +/- 43.4bp
Average Position of motif in Background91.3 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGTCAGGATT---
---VRGGATTARN

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGTCAGGATT-
---NGGGATTA

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGTCAGGATT---
TTGCCCGGATTAGG

PB0042.1_Mafk_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAGGATT----
AAGTCAGCANTTTTN

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAGGATT
ACGTCA-----

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGTCAGGATT---
HWWGTCAGCAWWTTT

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CGTCAGGATT--
----RGGATTAR

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGTCAGGATT---
NCTANGTCAGCAAATTT

MA0496.1_MAFK/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGTCAGGATT--
CTGAGTCAGCAATTT

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGTCAGGATT------
TGAACCGGATTAATGAA