Information for 23-AATCCCACTCCA (Motif 36)


Reverse Opposite:

p-value:1e-4
log p-value:-9.386e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.7 +/- 60.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--AATCCCACTCCA--
NNAGTCCCACTCNNNN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AATCCCACTCCA-----
AATCGCACTGCATTCCG

PH0122.1_Obox2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AATCCCACTCCA
ATAGTTAATCCCCCTCA-

PH0137.1_Pitx1/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AATCCCACTCCA
NTTGTTAATCCCTCTNN-

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AATCCCACTCCA
NTAGTTAATCCCCTTAN-

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCCACTCCA
GNNAGCTAATCCCCCN---

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AATCCCACTCCA-
---RSCACTYRAG

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AATCCCACTCCA
ATAGTTAATCCCCCNNA-

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AATCCCACTCCA
--AASCACTCAA

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AATCCCACTCCA
TAATCCCN-----