Information for 3-TGGTATTTATGC (Motif 7)


Reverse Opposite:

p-value:1e-12
log p-value:-2.989e+01
Information Content per bp:1.888
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets118.4 +/- 49.6bp
Average Position of motif in Background80.9 +/- 47.3bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGGTATTTATGC-
-KCTATTTTTRGH

MA0497.1_MEF2C/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGTATTTATGC---
TTCTATTTTTAGNNN

MA0052.2_MEF2A/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGTATTTATGC--
NNGCTATTTTTAGCN

MA0042.1_FOXI1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGGTATTTATGC
GGATGTTTGTTT

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGGTATTTATGC
---TGTTTATTT

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGGTATTTATGC-----
--ANATTTTTGCAANTN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGTATTTATGC
CCWGGAATGY----

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGGTATTTATGC
NNNNNNCTTTTATAN

MA0108.2_TBP/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGGTATTTATGC
NNNNNNCTTTTATAN

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTATTTATGC
NCNTTTGTTATTTNN--