Information for 11-CGACAGTTGAAC (Motif 14)


Reverse Opposite:

p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.642
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif10.99%
Number of Background Sequences with motif281.0
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets112.6 +/- 31.8bp
Average Position of motif in Background105.0 +/- 69.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CGACAGTTGAAC-
CACGGCAGTTGGTNN

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CGACAGTTGAAC-
NNNTGGCAGTTGGTNN

MA0100.2_Myb/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGACAGTTGAAC
TGGCAGTTGN--

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGACAGTTGAAC
TGGCAGTTGG--

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGACAGTTGAAC-
-GWAAYHTGABMC

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGACAGTTGAAC
-GGCVGTTR---

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGACAGTTGAAC
BRRCVGTTDN--

MA0500.1_Myog/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGACAGTTGAAC
-GACAGCTGCAG

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGACAGTTGAAC
-AACAGCTGCAG

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGACAGTTGAAC
NGNGACAGCTGCN-