Information for 17-GKGGGCCGGGTG (Motif 23)


Reverse Opposite:

p-value:1e-7
log p-value:-1.820e+01
Information Content per bp:1.805
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif133.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets74.8 +/- 39.2bp
Average Position of motif in Background106.3 +/- 72.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GKGGGCCGGGTG
GGGGGCGGGGCC

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GKGGGCCGGGTG--
NNAGGGGCGGGGTNNA

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GKGGGCCGGGTG
GGGGGCGGGGC-

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GKGGGCCGGGTG-
AGGGGGCGGGGCTG

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GKGGGCCGGGTG
GGGNGGGGGCGGGGC-

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GKGGGCCGGGTG-
NNTNAGGGGCGGNNNN

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GKGGGCCGGGTG--
NNTNNGGGGCGGNGNGN

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GKGGGCCGGGTG
-GGGGNGGGGC-

MA0039.2_Klf4/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GKGGGCCGGGTG
-TGGGTGGGGC-

MA0162.2_EGR1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GKGGGCCGGGTG
GGCGGGGGCGGGGG-