Information for 4-TGAACCAT (Motif 27)


Reverse Opposite:

p-value:1e-5
log p-value:-1.305e+01
Information Content per bp:1.930
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif8.79%
Number of Background Sequences with motif414.3
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets98.0 +/- 60.6bp
Average Position of motif in Background96.1 +/- 73.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0476.1_FOS/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGAACCAT-
TGTGACTCATT

PB0065.1_Sox15_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGAACCAT------
TAGTGAACAATAGATTT

MA0491.1_JUND/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGAACCAT-
GGTGACTCATC

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGAACCAT-----
TTTAGAACAATAAAAT

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGAACCAT------
AATGAACAATGGAATT

MA0462.1_BATF::JUN/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGAACCAT---
TGAGTCATTTC

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGAACCAT-----
NNNNNGAACAATTGANN

MA0077.1_SOX9/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGAACCAT--
-GAACAATGG

MA0099.2_JUN::FOS/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAACCAT
TGACTCA-

MA0087.1_Sox5/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGAACCAT
-NAACAAT