Information for 4-GAGVGGCTGTTT (Motif 4)


Reverse Opposite:

p-value:1e-12
log p-value:-2.820e+01
Information Content per bp:1.788
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif8.79%
Number of Background Sequences with motif58.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets106.1 +/- 54.3bp
Average Position of motif in Background125.2 +/- 52.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAGVGGCTGTTT--
GGNGCGNCTGTTNNN

MA0480.1_Foxo1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAGVGGCTGTTT---
----TCCTGTTTACA

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GAGVGGCTGTTT--
------CTGTTTAC

MA0157.1_FOXO3/Jaspar

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GAGVGGCTGTTT---
-------TGTTTACA

MA0042.1_FOXI1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGVGGCTGTTT----
----GGATGTTTGTTT

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GAGVGGCTGTTT----
-------TGTTTATTT

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GAGVGGCTGTTT----
----NYYTGTTTACHN

MA0593.1_FOXP2/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAGVGGCTGTTT----
-----TNTGTTTACTT

MA0031.1_FOXD1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GAGVGGCTGTTT--
------ATGTTTAC

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAGVGGCTGTTT
CTTGAGTGGCT----