Information for 8-CTTCAGGAACAC (Motif 8)


Reverse Opposite:

p-value:1e-11
log p-value:-2.740e+01
Information Content per bp:1.698
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif12.09%
Number of Background Sequences with motif221.2
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets141.5 +/- 48.5bp
Average Position of motif in Background91.7 +/- 65.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTTCAGGAACAC
--CCAGGAACAG

MA0062.2_GABPA/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTTCAGGAACAC
NCCACTTCCGG-----

MA0028.1_ELK1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTCAGGAACAC
CTTCCGGNNN--

MF0001.1_ETS_class/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTCAGGAACAC
CTTCCGGT----

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTTCAGGAACAC-
GTACATCCGGATTTTT

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTCAGGAACAC
ACTTCCGGNT---

PB0011.1_Ehf_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTCAGGAACAC
TNACTTCCGGNTNNN

MA0081.1_SPIB/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTTCAGGAACAC
--AGAGGAA---

MA0076.2_ELK4/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTTCAGGAACAC
CCACTTCCGGC----

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTTCAGGAACAC
HACTTCCGGY----