Information for 16-CAACAAATTTTG (Motif 19)


Reverse Opposite:

p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.962
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets81.2 +/- 34.6bp
Average Position of motif in Background88.1 +/- 51.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CAACAAATTTTG-
TNCNNAACAATTTTTNC

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAACAAATTTTG
-AACAAT-----

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAACAAATTTTG-
-AACAGATGGTCN

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAATTTTG
RNAACAATGG---

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAACAAATTTTG
NNCNNAACAATTNT--

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAACAAATTTTG
AAAGTAAACAAAAATT-

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAACAAATTTTG-----
---CTAATATTGCTAAA

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAACAAATTTTG
ATTTACGACAAATAGC-

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAACAAATTTTG
TCACGGAACAATAGGTG

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAACAAATTTTG
HWWGTCAGCAWWTTT--