Information for 2-ATTGTACACATT (Motif 2)


Reverse Opposite:

p-value:1e-12
log p-value:-2.816e+01
Information Content per bp:1.891
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets89.7 +/- 50.1bp
Average Position of motif in Background97.9 +/- 41.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0018.1_Foxk1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTACACATT--
NNNTTTGTTTACATTTN

MA0157.1_FOXO3/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATTGTACACATT
--TGTAAACA--

PB0019.1_Foxl1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTACACATT--
NNNTTTGTTTACATTTN

MA0084.1_SRY/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATTGTACACATT
ATTGTTTAN---

MA0031.1_FOXD1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATTGTACACATT
---GTAAACAT-

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ATTGTACACATT
ANNTCTATTGTTCNNNA-

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATTGTACACATT--
ATTTGCATACAATGG

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTACACATT--
NNNTTTGTTTACTTTTN

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATTGTACACATT
TTCAATTGTTCTAAAA

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATTGTACACATT---
CAGATGTGCACATACGT