Information for 8-CCCTGGGGGC (Motif 23)


Reverse Opposite:

p-value:1e-7
log p-value:-1.699e+01
Information Content per bp:1.535
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif6.51%
Number of Background Sequences with motif949.8
Percentage of Background Sequences with motif1.94%
Average Position of motif in Targets93.3 +/- 61.9bp
Average Position of motif in Background102.0 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0154.2_EBF1/Jaspar

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGGGGC
TCCCTGGGGAN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGGC
GTCCCCAGGGGA-

MA0524.1_TFAP2C/Jaspar

Match Rank:3
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGGGGC---
TGCCCTGGGGCNANN

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGGGGC-
TCCCNNGGGACN

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGGGGC-
ACCCCCCCGGGGGGN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGGC
ATGCCCTGAGGC-

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGGGGC-
NCCCCCCCGGGGGGN

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCCTGGGGGC--
SCCTSAGGSCAW

MA0003.2_TFAP2A/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGGGGC---
TGCCCTGAGGCANTN

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGGC--
ATTGCCTGAGGCGAA