Information for 11-GACAAGAAGA (Motif 26)


Reverse Opposite:

p-value:1e-5
log p-value:-1.354e+01
Information Content per bp:1.681
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif19.30%
Number of Background Sequences with motif5591.2
Percentage of Background Sequences with motif11.41%
Average Position of motif in Targets96.0 +/- 59.1bp
Average Position of motif in Background100.4 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0029.1_Mecom/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GACAAGAAGA--
AAGATAAGATAACA

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GACAAGAAGA-
TAAACTGATAAGAAGAT

MA0098.2_Ets1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACAAGAAGA---
NNNACAGGAAGTGGN

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACAAGAAGA
AACAGGAAGT

MA0474.1_Erg/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GACAAGAAGA--
-ACAGGAAGTGG

MA0035.3_Gata1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GACAAGAAGA
ANAGATAAGAA--

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GACAAGAAGA---
CAAACAACAACACCT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GACAAGAAGA
TACTGGAAAAAAAA-

MA0037.2_GATA3/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GACAAGAAGA
AGATAAGA---

MA0036.2_GATA2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GACAAGAAGA-
NCAGATAAGAANNN