Information for 3-ACGATCTGACAG (Motif 5)


Reverse Opposite:

p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.734
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif313.5
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets85.8 +/- 56.6bp
Average Position of motif in Background91.8 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0498.1_Meis1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACGATCTGACAG--
NNNTGAGTGACAGCT

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ACGATCTGACAG-
---VGCTGWCAVB

PH0105.1_Meis3/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACGATCTGACAG------
--GTATTGACAGGTNNTT

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACGATCTGACAG------
--NNATTGACAGGTGCTT

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACGATCTGACAG------
--NTATTGACAGCTNNTT

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACGATCTGACAG------
--GGATTGACAGGTCNTT

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACGATCTGACAG------
--GTATTGACAGCTNNTT

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACGATCTGACAG------
--NTATTGACAGGTNNTN

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACGATCTGACAG------
-GATATTGACAGCTGCGT

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACGATCTGACAG-
-GGTGYTGACAGS