Information for 1-AAGGYYTCTYTG (Motif 1)


Reverse Opposite:

p-value:1e-10
log p-value:-2.397e+01
Information Content per bp:1.706
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.72%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets91.2 +/- 54.4bp
Average Position of motif in Background56.4 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AAGGYYTCTYTG----
------YCTTTGTTCC

MA0442.1_SOX10/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:AAGGYYTCTYTG-
-------CTTTGT

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGGYYTCTYTG-------
--TNNTCCTTTGTTCTNNT

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAGGYYTCTYTG-------
---ANTCCTTTGTCTNNNN

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AAGGYYTCTYTG----
------CCWTTGTYYB

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAGGYYTCTYTG-------
--AATCCCTTTGATCTATC

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAGGYYTCTYTG-------
--ATTTCCTTTGATCTATA

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGGYYTCTYTG-------
--NNTTCCTTTGATCTNNA

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGGYYTCTYTG-------
--NNTTCCTTTGATCTANA

MA0523.1_TCF7L2/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AAGGYYTCTYTG------
----TNCCTTTGATCTTN