Information for 1-TCMGCACA (Motif 7)


Reverse Opposite:

p-value:1e-6
log p-value:-1.510e+01
Information Content per bp:1.848
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif11.32%
Number of Background Sequences with motif812.4
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets129.2 +/- 45.8bp
Average Position of motif in Background100.1 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0496.1_MAFK/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TCMGCACA--
CTGAGTCAGCAATTT

PB0041.1_Mafb_1/Jaspar

Match Rank:2
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TCMGCACA---
NCTANGTCAGCAAATTT

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCMGCACA
TGAGTCAGCA--

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCMGCACA---
HWWGTCAGCAWWTTT

MA0495.1_MAFF/Jaspar

Match Rank:5
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TCMGCACA----
GCTGAGTCAGCAATTTTT

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCMGCACA-------
AGCGGCACACACGCAA

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCMGCACA-------
CGAAGCACACAAAATA

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCMGCACA--
AAACCACAGC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCMGCACA---
NWAACCACADNN

MA0596.1_SREBF2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCMGCACA-
ATCACCCCAT