Information for 3-TTTCCAGGCT (Motif 9)


Reverse Opposite:

p-value:1e-5
log p-value:-1.194e+01
Information Content per bp:1.848
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif7.55%
Number of Background Sequences with motif438.2
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets107.5 +/- 56.6bp
Average Position of motif in Background103.3 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTTCCAGGCT
TTTTCCA----

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTTCCAGGCT-
NNNCTTTCCAGGAAA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTCCAGGCT
ATTTTCCATT--

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTCCAGGCT
ATTTCCTGTN-

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTCCAGGCT
ATTTCCTGTN-

MA0156.1_FEV/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTCCAGGCT
ATTTCCTG---

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTTCCAGGCT
NRYTTCCGGY--

MA0028.1_ELK1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTCCAGGCT
CTTCCGGNNN

MA0463.1_Bcl6/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTCCAGGCT-
NGCTTTCTAGGAAN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTCCAGGCT
HTTTCCCASG--