Source Name	Provider	Comment[Alternate Source Name]	Comment[HELP_ID]	Material Type	Term Source REF	Characteristics[Organism]	Term Source REF	Characteristics[DiseaseState]	Term Source REF	Comment[OCG Cohort]	Sample Name	Material Type	Term Source REF	Characteristics[OrganismPart]	Term Source REF	Protocol REF	Extract Name	Material Type	Term Source REF	Protocol REF	Labeled Extract Name	Material Type	Term Source REF	Label	Term Source REF	Protocol REF	Performer	Date	Assay Name	Technology Type	Term Source REF	Array Design REF	Comment[Array Serial No]	Comment[GEO Platform Accession]	Protocol REF	Comment[Scanning Station No]	Array Data File	Comment[OCG Data Level]	Protocol REF	Parameter Value[cutoff_value_NA_1_MAD]	Derived Array Data File	Comment[Data File ID]	Comment[OCG Data Level]	Protocol REF	Derived Array Data File	Comment[OCG Data Level]	Comment[Reference Genome]
TARGET-10-PANEPX	Weill Cornell Epigenomic Core	PANEPX_D0	X473218A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANEPX-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANEPX-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANEPX-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANEPX-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473218-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473218A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061486883	HELP_ALL_cent.ratio.norm.178_L2.txt	X473218A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473218A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANEPX	Weill Cornell Epigenomic Core	PANEPX_D0	X473218A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANEPX-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANEPX-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANEPX-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANEPX-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473218-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473218A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061486883	HELP_ALL_cent.ratio.norm.178_L2.txt	X473218A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473218A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANSHK	Weill Cornell Epigenomic Core	PANSHK_relapse	X512317A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANSHK-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANSHK-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANSHK-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANSHK-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512317-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512317A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.1076999	HELP_ALL_cent.ratio.norm.178_L2.txt	X512317A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512317A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANSHK	Weill Cornell Epigenomic Core	PANSHK_relapse	X512317A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANSHK-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANSHK-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANSHK-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANSHK-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512317-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512317A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.1076999	HELP_ALL_cent.ratio.norm.178_L2.txt	X512317A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512317A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANSHK	Weill Cornell Epigenomic Core	PANSHK_D0	X473212A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANSHK-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANSHK-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANSHK-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANSHK-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473212-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473212A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046868219	HELP_ALL_cent.ratio.norm.178_L2.txt	X473212A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473212A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANSHK	Weill Cornell Epigenomic Core	PANSHK_D0	X473212A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANSHK-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANSHK-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANSHK-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANSHK-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473212-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473212A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046868219	HELP_ALL_cent.ratio.norm.178_L2.txt	X473212A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473212A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANSJJ	Weill Cornell Epigenomic Core	PANSJJ_relapse	X500462A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANSJJ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANSJJ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANSJJ-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PANSJJ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500462-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500462A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.11489010500000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500462A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500462A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANSJJ	Weill Cornell Epigenomic Core	PANSJJ_relapse	X500462A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANSJJ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANSJJ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANSJJ-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PANSJJ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500462-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500462A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.11489010500000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500462A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500462A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANSJJ	Weill Cornell Epigenomic Core	PANSJJ_D0	X473375A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANSJJ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANSJJ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANSJJ-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANSJJ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473375-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473375A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.051812017000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X473375A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473375A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANSJJ	Weill Cornell Epigenomic Core	PANSJJ_D0	X473375A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANSJJ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANSJJ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANSJJ-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANSJJ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473375-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473375A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.051812017000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X473375A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473375A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANTSM	Weill Cornell Epigenomic Core	PANTSM_relapse	X534251A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANTSM-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANTSM-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANTSM-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PANTSM-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534251-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534251A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.115715489	HELP_ALL_cent.ratio.norm.178_L2.txt	X534251A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534251A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANTSM	Weill Cornell Epigenomic Core	PANTSM_relapse	X534251A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANTSM-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANTSM-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANTSM-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PANTSM-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534251-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534251A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.115715489	HELP_ALL_cent.ratio.norm.178_L2.txt	X534251A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534251A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANTSM	Weill Cornell Epigenomic Core	PANTSM_D0	X534251A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANTSM-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANTSM-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANTSM-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PANTSM-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534251-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534251A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.106142732	HELP_ALL_cent.ratio.norm.178_L2.txt	X534251A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534251A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANTSM	Weill Cornell Epigenomic Core	PANTSM_D0	X534251A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANTSM-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANTSM-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANTSM-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PANTSM-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534251-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534251A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.106142732	HELP_ALL_cent.ratio.norm.178_L2.txt	X534251A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534251A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANUHA	Weill Cornell Epigenomic Core	PANUHA_D0	X473223A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANUHA-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANUHA-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANUHA-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PANUHA-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473223-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473223A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.074880234	HELP_ALL_cent.ratio.norm.178_L2.txt	X473223A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473223A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANUHA	Weill Cornell Epigenomic Core	PANUHA_D0	X473223A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANUHA-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANUHA-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANUHA-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PANUHA-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473223-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473223A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.074880234	HELP_ALL_cent.ratio.norm.178_L2.txt	X473223A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473223A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANUSN	Weill Cornell Epigenomic Core	PANUSN_D0	X512317A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANUSN-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANUSN-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANUSN-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANUSN-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512317-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512317A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.09671463	HELP_ALL_cent.ratio.norm.178_L2.txt	X512317A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512317A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANUSN	Weill Cornell Epigenomic Core	PANUSN_D0	X512317A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANUSN-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANUSN-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANUSN-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANUSN-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512317-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512317A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.09671463	HELP_ALL_cent.ratio.norm.178_L2.txt	X512317A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512317A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANUSN	Weill Cornell Epigenomic Core	PANUSN_D0	X473348A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANUSN-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANUSN-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANUSN-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANUSN-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473348-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473348A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.043039116	HELP_ALL_cent.ratio.norm.178_L2.txt	X473348A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473348A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANUSN	Weill Cornell Epigenomic Core	PANUSN_D0	X473348A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANUSN-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANUSN-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANUSN-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANUSN-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473348-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473348A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.043039116	HELP_ALL_cent.ratio.norm.178_L2.txt	X473348A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473348A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANVIC	Weill Cornell Epigenomic Core	PANVIC_D0	X473395A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANVIC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANVIC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANVIC-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PANVIC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473395-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473395A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.056338867	HELP_ALL_cent.ratio.norm.178_L2.txt	X473395A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473395A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANVIC	Weill Cornell Epigenomic Core	PANVIC_D0	X473395A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANVIC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANVIC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANVIC-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PANVIC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473395-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473395A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.056338867	HELP_ALL_cent.ratio.norm.178_L2.txt	X473395A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473395A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANVJN	Weill Cornell Epigenomic Core	PANVJN_relapse	X512317A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANVJN-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANVJN-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANVJN-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANVJN-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512317-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512317A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.080096323	HELP_ALL_cent.ratio.norm.178_L2.txt	X512317A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512317A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANVJN	Weill Cornell Epigenomic Core	PANVJN_relapse	X512317A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANVJN-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANVJN-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANVJN-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANVJN-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512317-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512317A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.080096323	HELP_ALL_cent.ratio.norm.178_L2.txt	X512317A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512317A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANVJN	Weill Cornell Epigenomic Core	PANVJN_D0	X473215A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANVJN-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANVJN-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANVJN-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANVJN-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473215-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473215A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046604436999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X473215A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473215A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANVJN	Weill Cornell Epigenomic Core	PANVJN_D0	X473215A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANVJN-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANVJN-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANVJN-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANVJN-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473215-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473215A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046604436999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X473215A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473215A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANWHJ	Weill Cornell Epigenomic Core	PANWHJ_relapse	X512367A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANWHJ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANWHJ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANWHJ-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANWHJ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512367-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512367A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.070557602	HELP_ALL_cent.ratio.norm.178_L2.txt	X512367A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512367A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANWHJ	Weill Cornell Epigenomic Core	PANWHJ_relapse	X512367A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANWHJ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANWHJ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANWHJ-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANWHJ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512367-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512367A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.070557602	HELP_ALL_cent.ratio.norm.178_L2.txt	X512367A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512367A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANWHJ	Weill Cornell Epigenomic Core	PANWHJ_D0	X473348A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANWHJ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANWHJ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANWHJ-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANWHJ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473348-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473348A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.044945159	HELP_ALL_cent.ratio.norm.178_L2.txt	X473348A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473348A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANWHJ	Weill Cornell Epigenomic Core	PANWHJ_D0	X473348A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANWHJ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANWHJ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANWHJ-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANWHJ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473348-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473348A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.044945159	HELP_ALL_cent.ratio.norm.178_L2.txt	X473348A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473348A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANWYH	Weill Cornell Epigenomic Core	PANWYH_D0	X473214A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANWYH-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANWYH-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANWYH-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANWYH-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473214-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473214A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.062958961	HELP_ALL_cent.ratio.norm.178_L2.txt	X473214A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473214A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANWYH	Weill Cornell Epigenomic Core	PANWYH_D0	X473214A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANWYH-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANWYH-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANWYH-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANWYH-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473214-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473214A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.062958961	HELP_ALL_cent.ratio.norm.178_L2.txt	X473214A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473214A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANXGD	Weill Cornell Epigenomic Core	PANXGD_relapse	X500536A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANXGD-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANXGD-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANXGD-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PANXGD-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500536-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500536A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.063767326999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X500536A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500536A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANXGD	Weill Cornell Epigenomic Core	PANXGD_relapse	X500536A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANXGD-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANXGD-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANXGD-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PANXGD-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500536-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500536A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.063767326999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X500536A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500536A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANXGD	Weill Cornell Epigenomic Core	PANXGD_D0	X473353A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANXGD-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANXGD-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANXGD-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANXGD-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473353-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473353A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.040469363	HELP_ALL_cent.ratio.norm.178_L2.txt	X473353A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473353A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANXGD	Weill Cornell Epigenomic Core	PANXGD_D0	X473353A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANXGD-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANXGD-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANXGD-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANXGD-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473353-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473353A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.040469363	HELP_ALL_cent.ratio.norm.178_L2.txt	X473353A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473353A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANXPE	Weill Cornell Epigenomic Core	PANXPE_D0	X473347A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANXPE-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANXPE-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANXPE-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANXPE-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473347-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473347A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059665932	HELP_ALL_cent.ratio.norm.178_L2.txt	X473347A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473347A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANXPE	Weill Cornell Epigenomic Core	PANXPE_D0	X473347A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANXPE-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANXPE-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANXPE-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANXPE-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473347-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473347A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059665932	HELP_ALL_cent.ratio.norm.178_L2.txt	X473347A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473347A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANXPE	Weill Cornell Epigenomic Core	PANXPE_relapse	X512367A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANXPE-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANXPE-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANXPE-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANXPE-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512367-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512367A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.069119562	HELP_ALL_cent.ratio.norm.178_L2.txt	X512367A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512367A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANXPE	Weill Cornell Epigenomic Core	PANXPE_relapse	X512367A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANXPE-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANXPE-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANXPE-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANXPE-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512367-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512367A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.069119562	HELP_ALL_cent.ratio.norm.178_L2.txt	X512367A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512367A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANYGB	Weill Cornell Epigenomic Core	PANYGB_relapse	X512367A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANYGB-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANYGB-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANYGB-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANYGB-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512367-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512367A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.06306107	HELP_ALL_cent.ratio.norm.178_L2.txt	X512367A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512367A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANYGB	Weill Cornell Epigenomic Core	PANYGB_relapse	X512367A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANYGB-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANYGB-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANYGB-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANYGB-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	512367-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	512367A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.06306107	HELP_ALL_cent.ratio.norm.178_L2.txt	X512367A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X512367A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PANYGB	Weill Cornell Epigenomic Core	PANYGB_D0	X473283A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANYGB-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANYGB-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANYGB-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANYGB-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473283-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473283A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046927783	HELP_ALL_cent.ratio.norm.178_L2.txt	X473283A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473283A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANYGB	Weill Cornell Epigenomic Core	PANYGB_D0	X473283A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANYGB-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANYGB-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANYGB-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANYGB-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473283-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473283A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046927783	HELP_ALL_cent.ratio.norm.178_L2.txt	X473283A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473283A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANYZE	Weill Cornell Epigenomic Core	PANYZE_D0	X473371A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANYZE-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANYZE-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANYZE-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PANYZE-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473371-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473371A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050578195	HELP_ALL_cent.ratio.norm.178_L2.txt	X473371A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473371A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANYZE	Weill Cornell Epigenomic Core	PANYZE_D0	X473371A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANYZE-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANYZE-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANYZE-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PANYZE-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473371-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473371A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050578195	HELP_ALL_cent.ratio.norm.178_L2.txt	X473371A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473371A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PANZXC	Weill Cornell Epigenomic Core	PANZXC_relapse	X533991A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANZXC-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANZXC-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANZXC-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANZXC-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	533991-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	533991A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059631896	HELP_ALL_cent.ratio.norm.178_L2.txt	X533991A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X533991A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANZXC	Weill Cornell Epigenomic Core	PANZXC_relapse	X533991A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANZXC-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANZXC-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANZXC-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PANZXC-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	533991-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	533991A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059631896	HELP_ALL_cent.ratio.norm.178_L2.txt	X533991A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X533991A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANZXC	Weill Cornell Epigenomic Core	PANZXC_D0	X473375A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANZXC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANZXC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANZXC-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANZXC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473375-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473375A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.045532288	HELP_ALL_cent.ratio.norm.178_L2.txt	X473375A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473375A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PANZXC	Weill Cornell Epigenomic Core	PANZXC_D0	X473375A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PANZXC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PANZXC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PANZXC-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PANZXC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473375-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473375A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.045532288	HELP_ALL_cent.ratio.norm.178_L2.txt	X473375A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473375A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPACP	Weill Cornell Epigenomic Core	PAPACP_D0	X473347A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPACP-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPACP-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPACP-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPACP-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473347-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473347A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.040511909	HELP_ALL_cent.ratio.norm.178_L2.txt	X473347A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473347A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPACP	Weill Cornell Epigenomic Core	PAPACP_D0	X473347A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPACP-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPACP-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPACP-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPACP-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473347-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473347A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.040511909	HELP_ALL_cent.ratio.norm.178_L2.txt	X473347A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473347A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPACP	Weill Cornell Epigenomic Core	PAPACP_relapse	X533991A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPACP-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPACP-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPACP-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPACP-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	533991-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	533991A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061376265	HELP_ALL_cent.ratio.norm.178_L2.txt	X533991A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X533991A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPACP	Weill Cornell Epigenomic Core	PAPACP_relapse	X533991A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPACP-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPACP-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPACP-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPACP-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	533991-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	533991A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061376265	HELP_ALL_cent.ratio.norm.178_L2.txt	X533991A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X533991A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPAGK	Weill Cornell Epigenomic Core	PAPAGK_relapse	X534253A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPAGK-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPAGK-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPAGK-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPAGK-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534253-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534253A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.108746522	HELP_ALL_cent.ratio.norm.178_L2.txt	X534253A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534253A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPAGK	Weill Cornell Epigenomic Core	PAPAGK_relapse	X534253A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPAGK-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPAGK-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPAGK-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPAGK-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534253-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534253A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.108746522	HELP_ALL_cent.ratio.norm.178_L2.txt	X534253A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534253A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPAGK	Weill Cornell Epigenomic Core	PAPAGK_D0	X534253A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPAGK-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPAGK-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPAGK-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPAGK-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534253-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534253A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.112915989	HELP_ALL_cent.ratio.norm.178_L2.txt	X534253A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534253A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPAGK	Weill Cornell Epigenomic Core	PAPAGK_D0	X534253A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPAGK-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPAGK-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPAGK-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPAGK-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534253-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534253A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.112915989	HELP_ALL_cent.ratio.norm.178_L2.txt	X534253A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534253A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPAIZ	Weill Cornell Epigenomic Core	PAPAIZ_D0	X473348A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPAIZ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPAIZ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPAIZ-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPAIZ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473348-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473348A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.042077586	HELP_ALL_cent.ratio.norm.178_L2.txt	X473348A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473348A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPAIZ	Weill Cornell Epigenomic Core	PAPAIZ_D0	X473348A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPAIZ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPAIZ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPAIZ-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPAIZ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473348-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473348A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.042077586	HELP_ALL_cent.ratio.norm.178_L2.txt	X473348A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473348A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPBSY	Weill Cornell Epigenomic Core	PAPBSY_D0	X473223A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPBSY-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPBSY-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPBSY-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPBSY-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473223-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473223A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.071323423	HELP_ALL_cent.ratio.norm.178_L2.txt	X473223A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473223A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPBSY	Weill Cornell Epigenomic Core	PAPBSY_D0	X473223A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPBSY-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPBSY-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPBSY-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPBSY-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473223-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473223A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.071323423	HELP_ALL_cent.ratio.norm.178_L2.txt	X473223A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473223A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPCUR	Weill Cornell Epigenomic Core	PAPCUR_relapse	X500521A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPCUR-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPCUR-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPCUR-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPCUR-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500521-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500521A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.06557126	HELP_ALL_cent.ratio.norm.178_L2.txt	X500521A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500521A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPCUR	Weill Cornell Epigenomic Core	PAPCUR_relapse	X500521A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPCUR-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPCUR-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPCUR-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPCUR-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500521-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500521A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.06557126	HELP_ALL_cent.ratio.norm.178_L2.txt	X500521A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500521A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPCUR	Weill Cornell Epigenomic Core	PAPCUR_D0	X473229A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPCUR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPCUR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPCUR-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPCUR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473229-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473229A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.056492031	HELP_ALL_cent.ratio.norm.178_L2.txt	X473229A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473229A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPCUR	Weill Cornell Epigenomic Core	PAPCUR_D0	X473229A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPCUR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPCUR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPCUR-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPCUR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473229-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473229A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.056492031	HELP_ALL_cent.ratio.norm.178_L2.txt	X473229A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473229A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPCVZ	Weill Cornell Epigenomic Core	PAPCVZ_relapse	X533991A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPCVZ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPCVZ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPCVZ-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPCVZ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	533991-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	533991A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061554956	HELP_ALL_cent.ratio.norm.178_L2.txt	X533991A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X533991A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPCVZ	Weill Cornell Epigenomic Core	PAPCVZ_relapse	X533991A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPCVZ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPCVZ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPCVZ-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPCVZ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	533991-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	533991A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061554956	HELP_ALL_cent.ratio.norm.178_L2.txt	X533991A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X533991A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPCVZ	Weill Cornell Epigenomic Core	PAPCVZ_D0	X473230A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPCVZ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPCVZ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPCVZ-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPCVZ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473230-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473230A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.044230393	HELP_ALL_cent.ratio.norm.178_L2.txt	X473230A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473230A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPCVZ	Weill Cornell Epigenomic Core	PAPCVZ_D0	X473230A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPCVZ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPCVZ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPCVZ-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPCVZ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473230-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473230A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.044230393	HELP_ALL_cent.ratio.norm.178_L2.txt	X473230A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473230A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDJM	Weill Cornell Epigenomic Core	PAPDJM_relapse	X500397A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDJM-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDJM-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDJM-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPDJM-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500397-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500397A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.122182418	HELP_ALL_cent.ratio.norm.178_L2.txt	X500397A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500397A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDJM	Weill Cornell Epigenomic Core	PAPDJM_relapse	X500397A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDJM-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDJM-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDJM-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPDJM-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500397-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500397A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.122182418	HELP_ALL_cent.ratio.norm.178_L2.txt	X500397A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500397A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDJM	Weill Cornell Epigenomic Core	PAPDJM_D0	X473229A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDJM-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDJM-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDJM-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPDJM-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473229-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473229A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.049591137	HELP_ALL_cent.ratio.norm.178_L2.txt	X473229A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473229A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDJM	Weill Cornell Epigenomic Core	PAPDJM_D0	X473229A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDJM-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDJM-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDJM-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPDJM-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473229-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473229A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.049591137	HELP_ALL_cent.ratio.norm.178_L2.txt	X473229A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473229A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDKJ	Weill Cornell Epigenomic Core	PAPDKJ_relapse	X500517A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDKJ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDKJ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDKJ-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPDKJ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500517-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500517A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.064031109	HELP_ALL_cent.ratio.norm.178_L2.txt	X500517A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500517A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDKJ	Weill Cornell Epigenomic Core	PAPDKJ_relapse	X500517A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDKJ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDKJ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDKJ-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPDKJ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500517-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500517A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.064031109	HELP_ALL_cent.ratio.norm.178_L2.txt	X500517A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500517A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDKJ	Weill Cornell Epigenomic Core	PAPDKJ_D0	X473371A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDKJ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDKJ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDKJ-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPDKJ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473371-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473371A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.047029893	HELP_ALL_cent.ratio.norm.178_L2.txt	X473371A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473371A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDKJ	Weill Cornell Epigenomic Core	PAPDKJ_D0	X473371A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDKJ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDKJ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDKJ-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPDKJ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473371-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473371A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.047029893	HELP_ALL_cent.ratio.norm.178_L2.txt	X473371A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473371A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDUF	Weill Cornell Epigenomic Core	PAPDUF_D0	X473345A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDUF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDUF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDUF-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPDUF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473345-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473345A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.038937722	HELP_ALL_cent.ratio.norm.178_L2.txt	X473345A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473345A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDUF	Weill Cornell Epigenomic Core	PAPDUF_D0	X473345A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDUF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDUF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDUF-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPDUF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473345-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473345A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.038937722	HELP_ALL_cent.ratio.norm.178_L2.txt	X473345A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473345A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDUV	Weill Cornell Epigenomic Core	PAPDUV_relapse	X534103A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDUV-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDUV-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDUV-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPDUV-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534103-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534103A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.05582832	HELP_ALL_cent.ratio.norm.178_L2.txt	X534103A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534103A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDUV	Weill Cornell Epigenomic Core	PAPDUV_relapse	X534103A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDUV-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDUV-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDUV-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPDUV-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534103-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534103A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.05582832	HELP_ALL_cent.ratio.norm.178_L2.txt	X534103A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534103A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDUV	Weill Cornell Epigenomic Core	PAPDUV_D0	X473229A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDUV-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDUV-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDUV-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPDUV-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473229-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473229A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.060738081	HELP_ALL_cent.ratio.norm.178_L2.txt	X473229A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473229A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDUV	Weill Cornell Epigenomic Core	PAPDUV_D0	X473229A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDUV-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDUV-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDUV-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPDUV-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473229-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473229A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.060738081	HELP_ALL_cent.ratio.norm.178_L2.txt	X473229A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473229A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDWT	Weill Cornell Epigenomic Core	PAPDWT_relapse	X500525A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDWT-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDWT-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDWT-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPDWT-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500525-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500525A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.068200577	HELP_ALL_cent.ratio.norm.178_L2.txt	X500525A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500525A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDWT	Weill Cornell Epigenomic Core	PAPDWT_relapse	X500525A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDWT-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDWT-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDWT-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPDWT-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500525-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500525A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.068200577	HELP_ALL_cent.ratio.norm.178_L2.txt	X500525A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500525A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDWT	Weill Cornell Epigenomic Core	PAPDWT_D0	X473371A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDWT-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDWT-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDWT-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPDWT-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473371-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473371A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.041430893	HELP_ALL_cent.ratio.norm.178_L2.txt	X473371A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473371A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPDWT	Weill Cornell Epigenomic Core	PAPDWT_D0	X473371A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPDWT-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPDWT-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPDWT-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPDWT-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473371-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473371A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.041430893	HELP_ALL_cent.ratio.norm.178_L2.txt	X473371A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473371A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPECF	Weill Cornell Epigenomic Core	PAPECF_relapse	X534103A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPECF-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPECF-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPECF-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPECF-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534103-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534103A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050459067	HELP_ALL_cent.ratio.norm.178_L2.txt	X534103A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534103A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPECF	Weill Cornell Epigenomic Core	PAPECF_relapse	X534103A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPECF-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPECF-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPECF-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPECF-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534103-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534103A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050459067	HELP_ALL_cent.ratio.norm.178_L2.txt	X534103A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534103A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPECF	Weill Cornell Epigenomic Core	PAPECF_D0	X473230A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPECF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPECF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPECF-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPECF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473230-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473230A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.051182342	HELP_ALL_cent.ratio.norm.178_L2.txt	X473230A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473230A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPECF	Weill Cornell Epigenomic Core	PAPECF_D0	X473230A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPECF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPECF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPECF-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPECF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473230-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473230A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.051182342	HELP_ALL_cent.ratio.norm.178_L2.txt	X473230A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473230A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPEFH	Weill Cornell Epigenomic Core	PAPEFH_D0	X534257A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPEFH-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPEFH-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPEFH-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPEFH-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534257-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534257A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.105955531	HELP_ALL_cent.ratio.norm.178_L2.txt	X534257A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534257A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPEFH	Weill Cornell Epigenomic Core	PAPEFH_D0	X534257A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPEFH-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPEFH-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPEFH-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPEFH-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534257-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534257A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.105955531	HELP_ALL_cent.ratio.norm.178_L2.txt	X534257A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534257A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPEFH	Weill Cornell Epigenomic Core	PAPEFH_relapse	X534253A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPEFH-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPEFH-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPEFH-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPEFH-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534253-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534253A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.108899686	HELP_ALL_cent.ratio.norm.178_L2.txt	X534253A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534253A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPEFH	Weill Cornell Epigenomic Core	PAPEFH_relapse	X534253A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPEFH-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPEFH-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPEFH-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPEFH-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534253-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534253A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.108899686	HELP_ALL_cent.ratio.norm.178_L2.txt	X534253A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534253A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPEJN	Weill Cornell Epigenomic Core	PAPEJN_relapse	X500495A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPEJN-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPEJN-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPEJN-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPEJN-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500495-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500495A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065920133	HELP_ALL_cent.ratio.norm.178_L2.txt	X500495A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500495A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPEJN	Weill Cornell Epigenomic Core	PAPEJN_relapse	X500495A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPEJN-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPEJN-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPEJN-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPEJN-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500495-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500495A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065920133	HELP_ALL_cent.ratio.norm.178_L2.txt	X500495A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500495A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPEJN	Weill Cornell Epigenomic Core	PAPEJN_D0	X473223A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPEJN-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPEJN-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPEJN-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPEJN-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473223-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473223A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.047378766	HELP_ALL_cent.ratio.norm.178_L2.txt	X473223A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473223A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPEJN	Weill Cornell Epigenomic Core	PAPEJN_D0	X473223A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPEJN-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPEJN-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPEJN-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPEJN-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473223-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473223A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.047378766	HELP_ALL_cent.ratio.norm.178_L2.txt	X473223A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473223A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPESW	Weill Cornell Epigenomic Core	PAPESW_D0	X473346A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPESW-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPESW-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPESW-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPESW-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473346-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473346A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.036572187	HELP_ALL_cent.ratio.norm.178_L2.txt	X473346A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473346A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPESW	Weill Cornell Epigenomic Core	PAPESW_D0	X473346A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPESW-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPESW-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPESW-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPESW-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473346-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473346A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.036572187	HELP_ALL_cent.ratio.norm.178_L2.txt	X473346A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473346A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPGFP	Weill Cornell Epigenomic Core	PAPGFP_relapse	X500667A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPGFP-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPGFP-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPGFP-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPGFP-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500667-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500667A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.05631334	HELP_ALL_cent.ratio.norm.178_L2.txt	X500667A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500667A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPGFP	Weill Cornell Epigenomic Core	PAPGFP_relapse	X500667A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPGFP-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPGFP-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPGFP-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPGFP-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500667-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500667A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.05631334	HELP_ALL_cent.ratio.norm.178_L2.txt	X500667A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500667A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPGFP	Weill Cornell Epigenomic Core	PAPGFP_D0	X473345A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPGFP-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPGFP-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPGFP-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPGFP-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473345-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473345A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.040026889	HELP_ALL_cent.ratio.norm.178_L2.txt	X473345A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473345A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPGFP	Weill Cornell Epigenomic Core	PAPGFP_D0	X473345A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPGFP-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPGFP-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPGFP-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPGFP-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473345-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473345A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.040026889	HELP_ALL_cent.ratio.norm.178_L2.txt	X473345A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473345A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPGYC	Weill Cornell Epigenomic Core	PAPGYC_D0	X473230A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPGYC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPGYC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPGYC-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPGYC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473230-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473230A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050944087	HELP_ALL_cent.ratio.norm.178_L2.txt	X473230A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473230A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPGYC	Weill Cornell Epigenomic Core	PAPGYC_D0	X473230A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPGYC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPGYC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPGYC-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPGYC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473230-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473230A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050944087	HELP_ALL_cent.ratio.norm.178_L2.txt	X473230A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473230A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPHJF	Weill Cornell Epigenomic Core	PAPHJF_relapse	X500550A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPHJF-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPHJF-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPHJF-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPHJF-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500550-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500550A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.062975979	HELP_ALL_cent.ratio.norm.178_L2.txt	X500550A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500550A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPHJF	Weill Cornell Epigenomic Core	PAPHJF_relapse	X500550A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPHJF-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPHJF-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPHJF-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPHJF-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500550-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500550A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.062975979	HELP_ALL_cent.ratio.norm.178_L2.txt	X500550A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500550A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPHJF	Weill Cornell Epigenomic Core	PAPHJF_D0	X473372A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPHJF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPHJF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPHJF-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPHJF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473372-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473372A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.048876371	HELP_ALL_cent.ratio.norm.178_L2.txt	X473372A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473372A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPHJF	Weill Cornell Epigenomic Core	PAPHJF_D0	X473372A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPHJF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPHJF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPHJF-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPHJF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473372-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473372A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.048876371	HELP_ALL_cent.ratio.norm.178_L2.txt	X473372A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473372A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPHXN	Weill Cornell Epigenomic Core	PAPHXN_D0	X473285A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPHXN-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPHXN-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPHXN-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPHXN-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473285-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473285A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.038478229	HELP_ALL_cent.ratio.norm.178_L2.txt	X473285A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473285A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPHXN	Weill Cornell Epigenomic Core	PAPHXN_D0	X473285A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPHXN-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPHXN-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPHXN-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPHXN-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473285-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473285A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.038478229	HELP_ALL_cent.ratio.norm.178_L2.txt	X473285A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473285A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPIDY	Weill Cornell Epigenomic Core	PAPIDY_relapse	X500513A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPIDY-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPIDY-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPIDY-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPIDY-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500513-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500513A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.055819811	HELP_ALL_cent.ratio.norm.178_L2.txt	X500513A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500513A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPIDY	Weill Cornell Epigenomic Core	PAPIDY_relapse	X500513A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPIDY-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPIDY-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPIDY-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPIDY-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500513-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500513A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.055819811	HELP_ALL_cent.ratio.norm.178_L2.txt	X500513A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500513A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPIDY	Weill Cornell Epigenomic Core	PAPIDY_D0	X473346A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPIDY-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPIDY-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPIDY-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPIDY-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473346-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473346A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.033228104	HELP_ALL_cent.ratio.norm.178_L2.txt	X473346A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473346A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPIDY	Weill Cornell Epigenomic Core	PAPIDY_D0	X473346A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPIDY-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPIDY-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPIDY-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPIDY-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473346-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473346A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.033228104	HELP_ALL_cent.ratio.norm.178_L2.txt	X473346A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473346A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPIJB	Weill Cornell Epigenomic Core	PAPIJB_relapse	X500456A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPIJB-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPIJB-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPIJB-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPIJB-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500456-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500456A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.110507909	HELP_ALL_cent.ratio.norm.178_L2.txt	X500456A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500456A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPIJB	Weill Cornell Epigenomic Core	PAPIJB_relapse	X500456A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPIJB-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPIJB-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPIJB-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPIJB-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500456-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500456A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.110507909	HELP_ALL_cent.ratio.norm.178_L2.txt	X500456A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500456A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPIJB	Weill Cornell Epigenomic Core	PAPIJB_D0	X473395A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPIJB-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPIJB-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPIJB-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPIJB-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473395-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473395A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.054517916	HELP_ALL_cent.ratio.norm.178_L2.txt	X473395A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473395A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPIJB	Weill Cornell Epigenomic Core	PAPIJB_D0	X473395A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPIJB-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPIJB-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPIJB-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPIJB-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473395-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473395A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.054517916	HELP_ALL_cent.ratio.norm.178_L2.txt	X473395A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473395A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPISG	Weill Cornell Epigenomic Core	PAPISG_D0	X473233A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPISG-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPISG-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPISG-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPISG-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473233-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473233A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.055334791	HELP_ALL_cent.ratio.norm.178_L2.txt	X473233A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473233A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPISG	Weill Cornell Epigenomic Core	PAPISG_D0	X473233A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPISG-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPISG-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPISG-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPISG-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473233-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473233A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.055334791	HELP_ALL_cent.ratio.norm.178_L2.txt	X473233A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473233A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPISG	Weill Cornell Epigenomic Core	PAPISG_relapse	X500462A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPISG-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPISG-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPISG-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPISG-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500462-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500462A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.118276734	HELP_ALL_cent.ratio.norm.178_L2.txt	X500462A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500462A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPISG	Weill Cornell Epigenomic Core	PAPISG_relapse	X500462A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPISG-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPISG-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPISG-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPISG-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500462-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500462A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.118276734	HELP_ALL_cent.ratio.norm.178_L2.txt	X500462A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500462A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJHB	Weill Cornell Epigenomic Core	PAPJHB_relapse	X534103A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJHB-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJHB-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJHB-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPJHB-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534103-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534103A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059470222	HELP_ALL_cent.ratio.norm.178_L2.txt	X534103A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534103A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJHB	Weill Cornell Epigenomic Core	PAPJHB_relapse	X534103A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJHB-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJHB-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJHB-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPJHB-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534103-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534103A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059470222	HELP_ALL_cent.ratio.norm.178_L2.txt	X534103A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534103A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJHB	Weill Cornell Epigenomic Core	PAPJHB_D0	X473233A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJHB-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJHB-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJHB-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPJHB-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473233-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473233A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065869079	HELP_ALL_cent.ratio.norm.178_L2.txt	X473233A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473233A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJHB	Weill Cornell Epigenomic Core	PAPJHB_D0	X473233A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJHB-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJHB-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJHB-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPJHB-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473233-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473233A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065869079	HELP_ALL_cent.ratio.norm.178_L2.txt	X473233A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473233A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJIR	Weill Cornell Epigenomic Core	PAPJIR_D0	X473218A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJIR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJIR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJIR-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPJIR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473218-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473218A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.069442907999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473218A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473218A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJIR	Weill Cornell Epigenomic Core	PAPJIR_D0	X473218A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJIR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJIR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJIR-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPJIR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473218-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473218A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.069442907999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473218A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473218A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJPH	Weill Cornell Epigenomic Core	PAPJPH_D0	X473211A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJPH-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJPH-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJPH-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPJPH-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473211-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473211A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.068974907	HELP_ALL_cent.ratio.norm.178_L2.txt	X473211A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473211A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJPH	Weill Cornell Epigenomic Core	PAPJPH_D0	X473211A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJPH-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJPH-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJPH-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPJPH-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473211-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473211A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.068974907	HELP_ALL_cent.ratio.norm.178_L2.txt	X473211A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473211A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJPH	Weill Cornell Epigenomic Core	PAPJPH_relapse	X500397A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJPH-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJPH-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJPH-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPJPH-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500397-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500397A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.130827682	HELP_ALL_cent.ratio.norm.178_L2.txt	X500397A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500397A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJPH	Weill Cornell Epigenomic Core	PAPJPH_relapse	X500397A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJPH-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJPH-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJPH-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPJPH-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500397-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500397A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.130827682	HELP_ALL_cent.ratio.norm.178_L2.txt	X500397A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500397A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJXI	Weill Cornell Epigenomic Core	PAPJXI_relapse	X534248A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJXI-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJXI-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJXI-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPJXI-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534248-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534248A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.063197216	HELP_ALL_cent.ratio.norm.178_L2.txt	X534248A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534248A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJXI	Weill Cornell Epigenomic Core	PAPJXI_relapse	X534248A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJXI-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJXI-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJXI-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPJXI-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534248-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534248A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.063197216	HELP_ALL_cent.ratio.norm.178_L2.txt	X534248A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534248A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJXI	Weill Cornell Epigenomic Core	PAPJXI_D0	X473345A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJXI-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJXI-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJXI-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPJXI-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473345-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473345A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.034334289	HELP_ALL_cent.ratio.norm.178_L2.txt	X473345A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473345A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPJXI	Weill Cornell Epigenomic Core	PAPJXI_D0	X473345A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPJXI-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPJXI-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPJXI-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPJXI-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473345-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473345A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.034334289	HELP_ALL_cent.ratio.norm.178_L2.txt	X473345A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473345A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPKGY	Weill Cornell Epigenomic Core	PAPKGY_relapse	X534250A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPKGY-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPKGY-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPKGY-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPKGY-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534250-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534250A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.056321849	HELP_ALL_cent.ratio.norm.178_L2.txt	X534250A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534250A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPKGY	Weill Cornell Epigenomic Core	PAPKGY_relapse	X534250A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPKGY-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPKGY-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPKGY-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPKGY-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534250-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534250A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.056321849	HELP_ALL_cent.ratio.norm.178_L2.txt	X534250A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534250A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPKGY	Weill Cornell Epigenomic Core	PAPKGY_D0	X534251A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPKGY-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPKGY-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPKGY-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPKGY-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534251-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534251A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.113800938	HELP_ALL_cent.ratio.norm.178_L2.txt	X534251A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534251A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPKGY	Weill Cornell Epigenomic Core	PAPKGY_D0	X534251A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPKGY-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPKGY-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPKGY-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPKGY-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534251-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534251A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.113800938	HELP_ALL_cent.ratio.norm.178_L2.txt	X534251A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534251A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPKNC	Weill Cornell Epigenomic Core	PAPKNC_D0	X473235A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPKNC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPKNC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPKNC-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPKNC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473235-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473235A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.048187133	HELP_ALL_cent.ratio.norm.178_L2.txt	X473235A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473235A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPKNC	Weill Cornell Epigenomic Core	PAPKNC_D0	X473235A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPKNC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPKNC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPKNC-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPKNC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473235-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473235A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.048187133	HELP_ALL_cent.ratio.norm.178_L2.txt	X473235A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473235A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLDL	Weill Cornell Epigenomic Core	PAPLDL_D0	X534375A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLDL-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLDL-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLDL-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPLDL-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534375-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534375A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.071297896	HELP_ALL_cent.ratio.norm.178_L2.txt	X534375A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534375A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLDL	Weill Cornell Epigenomic Core	PAPLDL_D0	X534375A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLDL-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLDL-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLDL-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPLDL-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534375-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534375A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.071297896	HELP_ALL_cent.ratio.norm.178_L2.txt	X534375A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534375A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLDM	Weill Cornell Epigenomic Core	PAPLDM_relapse	X534248A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLDM-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLDM-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLDM-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPLDM-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534248-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534248A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.078130717	HELP_ALL_cent.ratio.norm.178_L2.txt	X534248A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534248A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLDM	Weill Cornell Epigenomic Core	PAPLDM_relapse	X534248A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLDM-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLDM-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLDM-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPLDM-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534248-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534248A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.078130717	HELP_ALL_cent.ratio.norm.178_L2.txt	X534248A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534248A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLDM	Weill Cornell Epigenomic Core	PAPLDM_D0	X473285A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLDM-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLDM-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLDM-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPLDM-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473285-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473285A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.043660282	HELP_ALL_cent.ratio.norm.178_L2.txt	X473285A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473285A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLDM	Weill Cornell Epigenomic Core	PAPLDM_D0	X473285A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLDM-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLDM-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLDM-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPLDM-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473285-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473285A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.043660282	HELP_ALL_cent.ratio.norm.178_L2.txt	X473285A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473285A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLTZ	Weill Cornell Epigenomic Core	PAPLTZ_relapse	X534248A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLTZ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLTZ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLTZ-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPLTZ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534248-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534248A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.060559389	HELP_ALL_cent.ratio.norm.178_L2.txt	X534248A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534248A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLTZ	Weill Cornell Epigenomic Core	PAPLTZ_relapse	X534248A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLTZ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLTZ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLTZ-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPLTZ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534248-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534248A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.060559389	HELP_ALL_cent.ratio.norm.178_L2.txt	X534248A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534248A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLTZ	Weill Cornell Epigenomic Core	PAPLTZ_D0	X473346A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLTZ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLTZ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLTZ-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPLTZ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473346-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473346A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.038401647	HELP_ALL_cent.ratio.norm.178_L2.txt	X473346A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473346A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLTZ	Weill Cornell Epigenomic Core	PAPLTZ_D0	X473346A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLTZ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLTZ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLTZ-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPLTZ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473346-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473346A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.038401647	HELP_ALL_cent.ratio.norm.178_L2.txt	X473346A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473346A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLUG	Weill Cornell Epigenomic Core	PAPLUG_relapse	X500401A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLUG-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLUG-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLUG-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPLUG-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500401-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500401A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.073671939	HELP_ALL_cent.ratio.norm.178_L2.txt	X500401A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500401A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLUG	Weill Cornell Epigenomic Core	PAPLUG_relapse	X500401A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLUG-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLUG-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLUG-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPLUG-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500401-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500401A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.073671939	HELP_ALL_cent.ratio.norm.178_L2.txt	X500401A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500401A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLUG	Weill Cornell Epigenomic Core	PAPLUG_D0	X473215A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLUG-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLUG-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLUG-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPLUG-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473215-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473215A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.060448771	HELP_ALL_cent.ratio.norm.178_L2.txt	X473215A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473215A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPLUG	Weill Cornell Epigenomic Core	PAPLUG_D0	X473215A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPLUG-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPLUG-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPLUG-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPLUG-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473215-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473215A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.060448771	HELP_ALL_cent.ratio.norm.178_L2.txt	X473215A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473215A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPMFI	Weill Cornell Epigenomic Core	PAPMFI_relapse	X534250A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPMFI-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPMFI-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPMFI-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPMFI-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534250-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534250A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.06238885	HELP_ALL_cent.ratio.norm.178_L2.txt	X534250A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534250A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPMFI	Weill Cornell Epigenomic Core	PAPMFI_relapse	X534250A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPMFI-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPMFI-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPMFI-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPMFI-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534250-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534250A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.06238885	HELP_ALL_cent.ratio.norm.178_L2.txt	X534250A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534250A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPMFI	Weill Cornell Epigenomic Core	PAPMFI_D0	X473214A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPMFI-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPMFI-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPMFI-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPMFI-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473214-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473214A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.060142443	HELP_ALL_cent.ratio.norm.178_L2.txt	X473214A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473214A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPMFI	Weill Cornell Epigenomic Core	PAPMFI_D0	X473214A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPMFI-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPMFI-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPMFI-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPMFI-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473214-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473214A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.060142443	HELP_ALL_cent.ratio.norm.178_L2.txt	X473214A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473214A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPMVB	Weill Cornell Epigenomic Core	PAPMVB_relapse	X500536A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPMVB-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPMVB-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPMVB-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPMVB-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500536-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500536A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050339939	HELP_ALL_cent.ratio.norm.178_L2.txt	X500536A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500536A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPMVB	Weill Cornell Epigenomic Core	PAPMVB_relapse	X500536A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPMVB-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPMVB-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPMVB-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPMVB-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500536-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500536A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050339939	HELP_ALL_cent.ratio.norm.178_L2.txt	X500536A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500536A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPMVB	Weill Cornell Epigenomic Core	PAPMVB_D0	X473211A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPMVB-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPMVB-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPMVB-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPMVB-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473211-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473211A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065426605	HELP_ALL_cent.ratio.norm.178_L2.txt	X473211A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473211A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPMVB	Weill Cornell Epigenomic Core	PAPMVB_D0	X473211A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPMVB-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPMVB-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPMVB-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPMVB-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473211-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473211A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065426605	HELP_ALL_cent.ratio.norm.178_L2.txt	X473211A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473211A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPMYD	Weill Cornell Epigenomic Core	PAPMYD_D0	X473234A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPMYD-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPMYD-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPMYD-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPMYD-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473234-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473234A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059240476	HELP_ALL_cent.ratio.norm.178_L2.txt	X473234A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473234A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPMYD	Weill Cornell Epigenomic Core	PAPMYD_D0	X473234A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPMYD-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPMYD-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPMYD-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPMYD-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473234-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473234A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059240476	HELP_ALL_cent.ratio.norm.178_L2.txt	X473234A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473234A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPNMY	Weill Cornell Epigenomic Core	PAPNMY_D0	X473235A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPNMY-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPNMY-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPNMY-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPNMY-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473235-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473235A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057555671	HELP_ALL_cent.ratio.norm.178_L2.txt	X473235A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473235A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPNMY	Weill Cornell Epigenomic Core	PAPNMY_D0	X473235A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPNMY-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPNMY-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPNMY-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPNMY-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473235-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473235A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057555671	HELP_ALL_cent.ratio.norm.178_L2.txt	X473235A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473235A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPNMY	Weill Cornell Epigenomic Core	PAPNMY_relapse	X500525A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPNMY-40A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPNMY-40A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPNMY-40A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPNMY-40A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500525-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500525A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.076063002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500525A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500525A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPNMY	Weill Cornell Epigenomic Core	PAPNMY_relapse	X500525A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPNMY-40A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPNMY-40A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPNMY-40A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPNMY-40A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500525-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500525A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.076063002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500525A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500525A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPNNX	Weill Cornell Epigenomic Core	PAPNNX_D0	X534381A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPNNX-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPNNX-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPNNX-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-30	TARGET-10-PAPNNX-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534381-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534381A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.133422963	HELP_ALL_cent.ratio.norm.178_L2.txt	X534381A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534381A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPNNX	Weill Cornell Epigenomic Core	PAPNNX_D0	X534381A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPNNX-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPNNX-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPNNX-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-30	TARGET-10-PAPNNX-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534381-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534381A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.133422963	HELP_ALL_cent.ratio.norm.178_L2.txt	X534381A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534381A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPPGN	Weill Cornell Epigenomic Core	PAPPGN_D0	X473285A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPPGN-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPPGN-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPPGN-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPPGN-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473285-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473285A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.048297751	HELP_ALL_cent.ratio.norm.178_L2.txt	X473285A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473285A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPPGN	Weill Cornell Epigenomic Core	PAPPGN_D0	X473285A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPPGN-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPPGN-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPPGN-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPPGN-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473285-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473285A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.048297751	HELP_ALL_cent.ratio.norm.178_L2.txt	X473285A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473285A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPPGN	Weill Cornell Epigenomic Core	PAPPGN_relapse	X500521A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPPGN-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPPGN-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPPGN-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPPGN-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500521-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500521A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059742514	HELP_ALL_cent.ratio.norm.178_L2.txt	X500521A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500521A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPPGN	Weill Cornell Epigenomic Core	PAPPGN_relapse	X500521A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPPGN-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPPGN-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPPGN-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPPGN-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500521-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500521A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059742514	HELP_ALL_cent.ratio.norm.178_L2.txt	X500521A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500521A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPPHL	Weill Cornell Epigenomic Core	PAPPHL_relapse	X534250A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPPHL-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPPHL-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPPHL-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPPHL-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534250-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534250A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.053054348	HELP_ALL_cent.ratio.norm.178_L2.txt	X534250A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534250A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPPHL	Weill Cornell Epigenomic Core	PAPPHL_relapse	X534250A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPPHL-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPPHL-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPPHL-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-24	TARGET-10-PAPPHL-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534250-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534250A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.053054348	HELP_ALL_cent.ratio.norm.178_L2.txt	X534250A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534250A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPPHL	Weill Cornell Epigenomic Core	PAPPHL_D0	X473372A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPPHL-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPPHL-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPPHL-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPPHL-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473372-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473372A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057062142	HELP_ALL_cent.ratio.norm.178_L2.txt	X473372A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473372A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPPHL	Weill Cornell Epigenomic Core	PAPPHL_D0	X473372A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPPHL-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPPHL-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPPHL-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPPHL-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473372-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473372A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057062142	HELP_ALL_cent.ratio.norm.178_L2.txt	X473372A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473372A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPRCS	Weill Cornell Epigenomic Core	PAPRCS_relapse	X500456A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPRCS-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPRCS-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPRCS-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPRCS-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500456-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500456A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.112362897	HELP_ALL_cent.ratio.norm.178_L2.txt	X500456A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500456A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPRCS	Weill Cornell Epigenomic Core	PAPRCS_relapse	X500456A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPRCS-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPRCS-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPRCS-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPRCS-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500456-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500456A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.112362897	HELP_ALL_cent.ratio.norm.178_L2.txt	X500456A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500456A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPRCS	Weill Cornell Epigenomic Core	PAPRCS_D0	X468773A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPRCS-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPRCS-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPRCS-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-10	TARGET-10-PAPRCS-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	468773-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	468773A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.07174037	HELP_ALL_cent.ratio.norm.178_L2.txt	X468773A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X468773A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPRCS	Weill Cornell Epigenomic Core	PAPRCS_D0	X468773A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPRCS-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPRCS-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPRCS-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-10	TARGET-10-PAPRCS-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	468773-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	468773A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.07174037	HELP_ALL_cent.ratio.norm.178_L2.txt	X468773A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X468773A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPRFE	Weill Cornell Epigenomic Core	PAPRFE_D0	X473235A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPRFE-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPRFE-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPRFE-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPRFE-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473235-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473235A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050203793	HELP_ALL_cent.ratio.norm.178_L2.txt	X473235A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473235A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPRFE	Weill Cornell Epigenomic Core	PAPRFE_D0	X473235A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPRFE-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPRFE-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPRFE-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPRFE-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473235-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473235A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050203793	HELP_ALL_cent.ratio.norm.178_L2.txt	X473235A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473235A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPRYB	Weill Cornell Epigenomic Core	PAPRYB_D0	X473211A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPRYB-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPRYB-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPRYB-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPRYB-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473211-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473211A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.063486526	HELP_ALL_cent.ratio.norm.178_L2.txt	X473211A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473211A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPRYB	Weill Cornell Epigenomic Core	PAPRYB_D0	X473211A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPRYB-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPRYB-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPRYB-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPRYB-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473211-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473211A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.063486526	HELP_ALL_cent.ratio.norm.178_L2.txt	X473211A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473211A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPRYB	Weill Cornell Epigenomic Core	PAPRYB_relapse	X500463A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPRYB-40A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPRYB-40A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPRYB-40A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPRYB-40A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500463-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500463A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.144178487	HELP_ALL_cent.ratio.norm.178_L2.txt	X500463A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500463A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPRYB	Weill Cornell Epigenomic Core	PAPRYB_relapse	X500463A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPRYB-40A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPRYB-40A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPRYB-40A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PAPRYB-40A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500463-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500463A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.144178487	HELP_ALL_cent.ratio.norm.178_L2.txt	X500463A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500463A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPSPG	Weill Cornell Epigenomic Core	PAPSPG_relapse	X534257A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPSPG-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPSPG-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPSPG-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPSPG-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534257-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534257A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.121246416	HELP_ALL_cent.ratio.norm.178_L2.txt	X534257A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534257A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPSPG	Weill Cornell Epigenomic Core	PAPSPG_relapse	X534257A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPSPG-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPSPG-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPSPG-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPSPG-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534257-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534257A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.121246416	HELP_ALL_cent.ratio.norm.178_L2.txt	X534257A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534257A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPSPG	Weill Cornell Epigenomic Core	PAPSPG_D0	X534257A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPSPG-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPSPG-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPSPG-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPSPG-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534257-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534257A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.086256923999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X534257A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534257A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPSPG	Weill Cornell Epigenomic Core	PAPSPG_D0	X534257A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPSPG-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPSPG-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPSPG-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPSPG-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534257-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534257A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.086256923999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X534257A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534257A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPSPN	Weill Cornell Epigenomic Core	PAPSPN_relapse	X534334A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPSPN-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPSPN-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPSPN-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPSPN-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534334-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534334A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.13246143199999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X534334A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534334A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPSPN	Weill Cornell Epigenomic Core	PAPSPN_relapse	X534334A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPSPN-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPSPN-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPSPN-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPSPN-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534334-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534334A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.13246143199999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X534334A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534334A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPSPN	Weill Cornell Epigenomic Core	PAPSPN_D0	X534334A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPSPN-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPSPN-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPSPN-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPSPN-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534334-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534334A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.110473873	HELP_ALL_cent.ratio.norm.178_L2.txt	X534334A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534334A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPSPN	Weill Cornell Epigenomic Core	PAPSPN_D0	X534334A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPSPN-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPSPN-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPSPN-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPSPN-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534334-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534334A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.110473873	HELP_ALL_cent.ratio.norm.178_L2.txt	X534334A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534334A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPTGG	Weill Cornell Epigenomic Core	PAPTGG_D0	X473234A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPTGG-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPTGG-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPTGG-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPTGG-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473234-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473234A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059682949999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X473234A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473234A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPTGG	Weill Cornell Epigenomic Core	PAPTGG_D0	X473234A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPTGG-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPTGG-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPTGG-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPTGG-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473234-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473234A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.059682949999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X473234A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473234A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPTHJ	Weill Cornell Epigenomic Core	PAPTHJ_D0	X473231A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPTHJ-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPTHJ-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPTHJ-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPTHJ-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473231-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473231A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.066047770000000006	HELP_ALL_cent.ratio.norm.178_L2.txt	X473231A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473231A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPTHJ	Weill Cornell Epigenomic Core	PAPTHJ_D0	X473231A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPTHJ-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPTHJ-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPTHJ-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPTHJ-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473231-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473231A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.066047770000000006	HELP_ALL_cent.ratio.norm.178_L2.txt	X473231A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473231A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPTHJ	Weill Cornell Epigenomic Core	PAPTHJ_relapse	X500550A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPTHJ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPTHJ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPTHJ-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPTHJ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500550-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500550A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046357672000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X500550A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500550A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPTHJ	Weill Cornell Epigenomic Core	PAPTHJ_relapse	X500550A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPTHJ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPTHJ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPTHJ-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPTHJ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500550-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500550A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046357672000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X500550A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500550A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPTLM	Weill Cornell Epigenomic Core	PAPTLM_D0	X473283A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPTLM-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPTLM-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPTLM-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPTLM-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473283-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473283A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.063392926000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X473283A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473283A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPTLM	Weill Cornell Epigenomic Core	PAPTLM_D0	X473283A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPTLM-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPTLM-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPTLM-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPTLM-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473283-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473283A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.063392926000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X473283A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473283A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPUDR	Weill Cornell Epigenomic Core	PAPUDR_D0	X468786A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPUDR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPUDR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPUDR-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-11	TARGET-10-PAPUDR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	468786-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	468786A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.05351384	HELP_ALL_cent.ratio.norm.178_L2.txt	X468786A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X468786A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPUDR	Weill Cornell Epigenomic Core	PAPUDR_D0	X468786A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPUDR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPUDR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPUDR-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-11	TARGET-10-PAPUDR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	468786-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	468786A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.05351384	HELP_ALL_cent.ratio.norm.178_L2.txt	X468786A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X468786A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPVNW	Weill Cornell Epigenomic Core	PAPVNW_D0	X473392A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPVNW-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPVNW-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPVNW-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPVNW-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473392-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473392A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.047676585	HELP_ALL_cent.ratio.norm.178_L2.txt	X473392A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473392A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPVNW	Weill Cornell Epigenomic Core	PAPVNW_D0	X473392A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPVNW-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPVNW-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPVNW-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPVNW-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473392-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473392A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.047676585	HELP_ALL_cent.ratio.norm.178_L2.txt	X473392A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473392A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPVTA	Weill Cornell Epigenomic Core	PAPVTA_relapse	X500521A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPVTA-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPVTA-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPVTA-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPVTA-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500521-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500521A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046468291000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500521A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500521A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPVTA	Weill Cornell Epigenomic Core	PAPVTA_relapse	X500521A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPVTA-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPVTA-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPVTA-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPVTA-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500521-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500521A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046468291000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500521A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500521A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPVTA	Weill Cornell Epigenomic Core	PAPVTA_D0	X473215A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPVTA-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPVTA-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPVTA-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPVTA-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473215-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473215A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057581198	HELP_ALL_cent.ratio.norm.178_L2.txt	X473215A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473215A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPVTA	Weill Cornell Epigenomic Core	PAPVTA_D0	X473215A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPVTA-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPVTA-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPVTA-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPVTA-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473215-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473215A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057581198	HELP_ALL_cent.ratio.norm.178_L2.txt	X473215A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473215A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZGR	Weill Cornell Epigenomic Core	PAPZGR_relapse	X500517A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZGR-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZGR-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZGR-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPZGR-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500517-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500517A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.073357101999999993	HELP_ALL_cent.ratio.norm.178_L2.txt	X500517A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500517A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZGR	Weill Cornell Epigenomic Core	PAPZGR_relapse	X500517A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZGR-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZGR-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZGR-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPZGR-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500517-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500517A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.073357101999999993	HELP_ALL_cent.ratio.norm.178_L2.txt	X500517A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500517A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZGR	Weill Cornell Epigenomic Core	PAPZGR_D0	X473353A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZGR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZGR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZGR-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPZGR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473353-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473353A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.04753193	HELP_ALL_cent.ratio.norm.178_L2.txt	X473353A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473353A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZGR	Weill Cornell Epigenomic Core	PAPZGR_D0	X473353A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZGR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZGR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZGR-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PAPZGR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473353-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473353A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.04753193	HELP_ALL_cent.ratio.norm.178_L2.txt	X473353A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473353A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZNK	Weill Cornell Epigenomic Core	PAPZNK_relapse	X534334A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZNK-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZNK-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZNK-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPZNK-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534334-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534334A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.096978412	HELP_ALL_cent.ratio.norm.178_L2.txt	X534334A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534334A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZNK	Weill Cornell Epigenomic Core	PAPZNK_relapse	X534334A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZNK-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZNK-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZNK-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPZNK-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534334-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534334A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.096978412	HELP_ALL_cent.ratio.norm.178_L2.txt	X534334A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534334A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZNK	Weill Cornell Epigenomic Core	PAPZNK_D0	X534342A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZNK-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZNK-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZNK-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPZNK-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534342-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534342A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.096093464000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X534342A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534342A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZNK	Weill Cornell Epigenomic Core	PAPZNK_D0	X534342A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZNK-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZNK-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZNK-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PAPZNK-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534342-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534342A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.096093464000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X534342A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534342A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZST	Weill Cornell Epigenomic Core	PAPZST_relapse	X500550A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZST-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZST-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZST-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPZST-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500550-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500550A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065775477999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X500550A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500550A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZST	Weill Cornell Epigenomic Core	PAPZST_relapse	X500550A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZST-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZST-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZST-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PAPZST-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500550-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500550A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065775477999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X500550A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500550A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZST	Weill Cornell Epigenomic Core	PAPZST_D0	X473392A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZST-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZST-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZST-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPZST-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473392-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473392A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.055700683000000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X473392A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473392A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PAPZST	Weill Cornell Epigenomic Core	PAPZST_D0	X473392A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PAPZST-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PAPZST-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PAPZST-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PAPZST-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473392-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473392A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.055700683000000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X473392A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473392A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARACA	Weill Cornell Epigenomic Core	PARACA_relapse	X500667A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARACA-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARACA-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARACA-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARACA-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500667-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500667A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.051182341999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X500667A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500667A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARACA	Weill Cornell Epigenomic Core	PARACA_relapse	X500667A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARACA-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARACA-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARACA-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARACA-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500667-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500667A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.051182341999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X500667A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500667A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARACA	Weill Cornell Epigenomic Core	PARACA_D0	X473393A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARACA-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARACA-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARACA-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARACA-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473393-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473393A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.042579624000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X473393A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473393A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARACA	Weill Cornell Epigenomic Core	PARACA_D0	X473393A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARACA-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARACA-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARACA-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARACA-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473393-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473393A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.042579624000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X473393A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473393A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARAKF	Weill Cornell Epigenomic Core	PARAKF_D0	X534381A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARAKF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARAKF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARAKF-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-30	TARGET-10-PARAKF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534381-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534381A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.14845006399999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X534381A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534381A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARAKF	Weill Cornell Epigenomic Core	PARAKF_D0	X534381A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARAKF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARAKF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARAKF-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-30	TARGET-10-PARAKF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534381-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534381A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.14845006399999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X534381A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534381A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARARJ	Weill Cornell Epigenomic Core	PARARJ_D0	X473214A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARARJ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARARJ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARARJ-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARARJ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473214-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473214A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.051344015	HELP_ALL_cent.ratio.norm.178_L2.txt	X473214A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473214A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARARJ	Weill Cornell Epigenomic Core	PARARJ_D0	X473214A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARARJ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARARJ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARARJ-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARARJ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473214-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473214A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.051344015	HELP_ALL_cent.ratio.norm.178_L2.txt	X473214A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473214A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARBVI	Weill Cornell Epigenomic Core	PARBVI_relapse	X500493A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARBVI-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARBVI-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARBVI-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARBVI-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500493-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500493A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.089575479999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X500493A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500493A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARBVI	Weill Cornell Epigenomic Core	PARBVI_relapse	X500493A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARBVI-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARBVI-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARBVI-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARBVI-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500493-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500493A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.089575479999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X500493A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500493A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARBVI	Weill Cornell Epigenomic Core	PARBVI_D0	X473212A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARBVI-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARBVI-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARBVI-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARBVI-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473212-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473212A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.052875656	HELP_ALL_cent.ratio.norm.178_L2.txt	X473212A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473212A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARBVI	Weill Cornell Epigenomic Core	PARBVI_D0	X473212A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARBVI-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARBVI-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARBVI-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARBVI-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473212-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473212A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.052875656	HELP_ALL_cent.ratio.norm.178_L2.txt	X473212A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473212A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARCBK	Weill Cornell Epigenomic Core	PARCBK_relapse	X500525A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARCBK-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARCBK-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARCBK-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARCBK-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500525-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500525A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065290458999999995	HELP_ALL_cent.ratio.norm.178_L2.txt	X500525A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500525A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARCBK	Weill Cornell Epigenomic Core	PARCBK_relapse	X500525A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARCBK-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARCBK-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARCBK-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARCBK-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500525-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500525A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065290458999999995	HELP_ALL_cent.ratio.norm.178_L2.txt	X500525A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500525A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARCBK	Weill Cornell Epigenomic Core	PARCBK_D0	X473353A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARCBK-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARCBK-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARCBK-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARCBK-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473353-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473353A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.039737579000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X473353A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473353A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARCBK	Weill Cornell Epigenomic Core	PARCBK_D0	X473353A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARCBK-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARCBK-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARCBK-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARCBK-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473353-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473353A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.039737579000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X473353A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473353A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARCHB	Weill Cornell Epigenomic Core	PARCHB_D0	X473212A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARCHB-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARCHB-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARCHB-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARCHB-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473212-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473212A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.047157528999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X473212A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473212A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARCHB	Weill Cornell Epigenomic Core	PARCHB_D0	X473212A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARCHB-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARCHB-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARCHB-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARCHB-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473212-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473212A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.047157528999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X473212A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473212A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARDLR	Weill Cornell Epigenomic Core	PARDLR_D0	X473234A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARDLR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARDLR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARDLR-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARDLR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473234-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473234A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.049352882000000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X473234A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473234A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARDLR	Weill Cornell Epigenomic Core	PARDLR_D0	X473234A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARDLR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARDLR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARDLR-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARDLR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473234-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473234A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.049352882000000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X473234A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473234A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARDNF	Weill Cornell Epigenomic Core	PARDNF_D0	X473218A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARDNF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARDNF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARDNF-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARDNF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473218-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473218A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.066958245999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X473218A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473218A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARDNF	Weill Cornell Epigenomic Core	PARDNF_D0	X473218A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARDNF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARDNF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARDNF-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARDNF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473218-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473218A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.066958245999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X473218A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473218A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARFLV	Weill Cornell Epigenomic Core	PARFLV_relapse	X500401A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARFLV-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARFLV-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARFLV-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARFLV-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500401-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500401A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.11578356200000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500401A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500401A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARFLV	Weill Cornell Epigenomic Core	PARFLV_relapse	X500401A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARFLV-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARFLV-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARFLV-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARFLV-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500401-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500401A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.11578356200000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500401A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500401A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARFLV	Weill Cornell Epigenomic Core	PARFLV_D0	X473391A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARFLV-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARFLV-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARFLV-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARFLV-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473391-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473391A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.038563320999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473391A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473391A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARFLV	Weill Cornell Epigenomic Core	PARFLV_D0	X473391A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARFLV-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARFLV-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARFLV-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARFLV-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473391-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473391A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.038563320999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473391A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473391A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGFV	Weill Cornell Epigenomic Core	PARGFV_D0	X473393A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGFV-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGFV-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGFV-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARGFV-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473393-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473393A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.034989490999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473393A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473393A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGFV	Weill Cornell Epigenomic Core	PARGFV_D0	X473393A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGFV-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGFV-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGFV-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARGFV-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473393-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473393A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.034989490999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473393A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473393A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGFV	Weill Cornell Epigenomic Core	PARGFV_relapse	X500493A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGFV-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGFV-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGFV-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARGFV-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500493-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500493A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.087286528000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500493A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500493A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGFV	Weill Cornell Epigenomic Core	PARGFV_relapse	X500493A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGFV-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGFV-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGFV-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARGFV-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500493-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500493A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.087286528000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500493A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500493A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGHW	Weill Cornell Epigenomic Core	PARGHW_D0	X534381A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGHW-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGHW-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGHW-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-30	TARGET-10-PARGHW-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534381-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534381A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.13329532599999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X534381A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534381A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGHW	Weill Cornell Epigenomic Core	PARGHW_D0	X534381A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGHW-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGHW-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGHW-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-30	TARGET-10-PARGHW-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534381-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534381A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.13329532599999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X534381A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534381A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGML	Weill Cornell Epigenomic Core	PARGML_D0	X473231A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGML-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGML-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGML-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARGML-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473231-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473231A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.067928285000000005	HELP_ALL_cent.ratio.norm.178_L2.txt	X473231A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473231A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGML	Weill Cornell Epigenomic Core	PARGML_D0	X473231A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGML-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGML-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGML-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARGML-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473231-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473231A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.067928285000000005	HELP_ALL_cent.ratio.norm.178_L2.txt	X473231A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473231A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGML	Weill Cornell Epigenomic Core	PARGML_relapse	X500493A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGML-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGML-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGML-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARGML-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500493-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500493A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.088775622999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X500493A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500493A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGML	Weill Cornell Epigenomic Core	PARGML_relapse	X500493A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGML-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGML-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGML-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARGML-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500493-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500493A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.088775622999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X500493A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500493A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGVZ	Weill Cornell Epigenomic Core	PARGVZ_D0	X468786A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGVZ-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGVZ-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGVZ-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-10	TARGET-10-PARGVZ-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	468786-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	468786A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.051658851999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X468786A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X468786A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGVZ	Weill Cornell Epigenomic Core	PARGVZ_D0	X468786A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGVZ-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGVZ-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGVZ-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-10	TARGET-10-PARGVZ-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	468786-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	468786A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.051658851999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X468786A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X468786A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGVZ	Weill Cornell Epigenomic Core	PARGVZ_relapse	X500536A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGVZ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGVZ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGVZ-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARGVZ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500536-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500536A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.075960892000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500536A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500536A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARGVZ	Weill Cornell Epigenomic Core	PARGVZ_relapse	X500536A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARGVZ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARGVZ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARGVZ-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARGVZ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500536-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500536A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.075960892000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500536A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500536A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARIAD	Weill Cornell Epigenomic Core	PARIAD_D0	X534382A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARIAD-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARIAD-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARIAD-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-30	TARGET-10-PARIAD-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534382-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534382A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.11910211800000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X534382A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534382A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARIAD	Weill Cornell Epigenomic Core	PARIAD_D0	X534382A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARIAD-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARIAD-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARIAD-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-30	TARGET-10-PARIAD-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534382-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534382A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.11910211800000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X534382A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534382A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARJSR	Weill Cornell Epigenomic Core	PARJSR_relapse	X500463A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARJSR-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARJSR-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARJSR-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARJSR-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500463-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500463A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.13991541900000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500463A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500463A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARJSR	Weill Cornell Epigenomic Core	PARJSR_relapse	X500463A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARJSR-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARJSR-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARJSR-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARJSR-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500463-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500463A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.13991541900000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500463A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500463A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARJSR	Weill Cornell Epigenomic Core	PARJSR_D0	X473283A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARJSR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARJSR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARJSR-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARJSR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473283-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473283A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050288884999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473283A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473283A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARJSR	Weill Cornell Epigenomic Core	PARJSR_D0	X473283A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARJSR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARJSR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARJSR-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARJSR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473283-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473283A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.050288884999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473283A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473283A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARKNJ	Weill Cornell Epigenomic Core	PARKNJ_D0	X473391A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARKNJ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARKNJ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARKNJ-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARKNJ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473391-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473391A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.042758315999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473391A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473391A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARKNJ	Weill Cornell Epigenomic Core	PARKNJ_D0	X473391A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARKNJ-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARKNJ-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARKNJ-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARKNJ-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473391-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473391A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.042758315999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473391A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473391A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARLAF	Weill Cornell Epigenomic Core	PARLAF_relapse	X500495A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARLAF-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARLAF-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARLAF-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARLAF-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500495-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500495A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065196857999999996	HELP_ALL_cent.ratio.norm.178_L2.txt	X500495A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500495A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARLAF	Weill Cornell Epigenomic Core	PARLAF_relapse	X500495A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARLAF-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARLAF-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARLAF-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARLAF-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500495-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500495A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065196857999999996	HELP_ALL_cent.ratio.norm.178_L2.txt	X500495A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500495A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARLAF	Weill Cornell Epigenomic Core	PARLAF_D0	X473231A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARLAF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARLAF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARLAF-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARLAF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473231-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473231A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065486167999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X473231A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473231A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARLAF	Weill Cornell Epigenomic Core	PARLAF_D0	X473231A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARLAF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARLAF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARLAF-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARLAF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473231-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473231A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.065486167999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X473231A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473231A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARLEK	Weill Cornell Epigenomic Core	PARLEK_D0	X473392A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARLEK-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARLEK-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARLEK-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARLEK-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473392-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473392A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.048969971000000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X473392A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473392A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARLEK	Weill Cornell Epigenomic Core	PARLEK_D0	X473392A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARLEK-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARLEK-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARLEK-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARLEK-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473392-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473392A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.048969971000000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X473392A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473392A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMNG	Weill Cornell Epigenomic Core	PARMNG_relapse	X500456A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMNG-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMNG-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMNG-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARMNG-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500456-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500456A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.093387565000000006	HELP_ALL_cent.ratio.norm.178_L2.txt	X500456A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500456A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMNG	Weill Cornell Epigenomic Core	PARMNG_relapse	X500456A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMNG-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMNG-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMNG-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARMNG-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500456-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500456A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.093387565000000006	HELP_ALL_cent.ratio.norm.178_L2.txt	X500456A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500456A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMNG	Weill Cornell Epigenomic Core	PARMNG_D0	X473372A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMNG-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMNG-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMNG-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARMNG-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473372-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473372A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061214590999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X473372A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473372A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMNG	Weill Cornell Epigenomic Core	PARMNG_D0	X473372A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMNG-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMNG-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMNG-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARMNG-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473372-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473372A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061214590999999999	HELP_ALL_cent.ratio.norm.178_L2.txt	X473372A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473372A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMSP	Weill Cornell Epigenomic Core	PARMSP_relapse	X500667A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMSP-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMSP-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMSP-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARMSP-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500667-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500667A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.068209086000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500667A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500667A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMSP	Weill Cornell Epigenomic Core	PARMSP_relapse	X500667A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMSP-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMSP-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMSP-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARMSP-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500667-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500667A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.068209086000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500667A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500667A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMSP	Weill Cornell Epigenomic Core	PARMSP_D0	X473393A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMSP-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMSP-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMSP-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARMSP-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473393-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473393A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.052152380999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473393A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473393A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMSP	Weill Cornell Epigenomic Core	PARMSP_D0	X473393A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMSP-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMSP-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMSP-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARMSP-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473393-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473393A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.052152380999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473393A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473393A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMXF	Weill Cornell Epigenomic Core	PARMXF_D0	X473233A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMXF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMXF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMXF-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARMXF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473233-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473233A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.054577479999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473233A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473233A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMXF	Weill Cornell Epigenomic Core	PARMXF_D0	X473233A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMXF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMXF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMXF-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARMXF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473233-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473233A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.054577479999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473233A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473233A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMXF	Weill Cornell Epigenomic Core	PARMXF_relapse	X500463A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMXF-40A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMXF-40A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMXF-40A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARMXF-40A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500463-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500463A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.096238118999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X500463A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500463A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARMXF	Weill Cornell Epigenomic Core	PARMXF_relapse	X500463A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARMXF-40A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARMXF-40A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARMXF-40A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARMXF-40A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500463-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500463A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.096238118999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X500463A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500463A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARNDR	Weill Cornell Epigenomic Core	PARNDR_D0	X500475A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARNDR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARNDR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARNDR-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARNDR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500475-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500475A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.094442694999999993	HELP_ALL_cent.ratio.norm.178_L2.txt	X500475A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500475A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARNDR	Weill Cornell Epigenomic Core	PARNDR_D0	X500475A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARNDR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARNDR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARNDR-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARNDR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500475-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500475A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.094442694999999993	HELP_ALL_cent.ratio.norm.178_L2.txt	X500475A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500475A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPCA	Weill Cornell Epigenomic Core	PARPCA_D0	X473391A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPCA-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPCA-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPCA-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARPCA-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473391-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473391A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046587417999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473391A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473391A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPCA	Weill Cornell Epigenomic Core	PARPCA_D0	X473391A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPCA-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPCA-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPCA-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-30	TARGET-10-PARPCA-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473391-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473391A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046587417999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X473391A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473391A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPRD	Weill Cornell Epigenomic Core	PARPRD_relapse	X500475A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPRD-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPRD-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPRD-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARPRD-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500475-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500475A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.074403724000000004	HELP_ALL_cent.ratio.norm.178_L2.txt	X500475A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500475A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPRD	Weill Cornell Epigenomic Core	PARPRD_relapse	X500475A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPRD-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPRD-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPRD-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARPRD-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500475-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500475A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.074403724000000004	HELP_ALL_cent.ratio.norm.178_L2.txt	X500475A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500475A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPRD	Weill Cornell Epigenomic Core	PARPRD_D0	X468786A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPRD-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPRD-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPRD-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-10	TARGET-10-PARPRD-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	468786-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	468786A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057334433999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X468786A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X468786A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPRD	Weill Cornell Epigenomic Core	PARPRD_D0	X468786A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPRD-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPRD-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPRD-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-10	TARGET-10-PARPRD-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	468786-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	468786A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057334433999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X468786A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X468786A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPRW	Weill Cornell Epigenomic Core	PARPRW_relapse	X534342A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPRW-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPRW-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPRW-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PARPRW-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534342-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534342A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.091022030000000004	HELP_ALL_cent.ratio.norm.178_L2.txt	X534342A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534342A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPRW	Weill Cornell Epigenomic Core	PARPRW_relapse	X534342A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPRW-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPRW-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPRW-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PARPRW-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534342-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534342A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.091022030000000004	HELP_ALL_cent.ratio.norm.178_L2.txt	X534342A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534342A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPRW	Weill Cornell Epigenomic Core	PARPRW_D0	X534342A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPRW-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPRW-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPRW-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PARPRW-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534342-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534342A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.100339514	HELP_ALL_cent.ratio.norm.178_L2.txt	X534342A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534342A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPRW	Weill Cornell Epigenomic Core	PARPRW_D0	X534342A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPRW-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPRW-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPRW-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PARPRW-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534342-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534342A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.100339514	HELP_ALL_cent.ratio.norm.178_L2.txt	X534342A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534342A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPUR	Weill Cornell Epigenomic Core	PARPUR_D0	X473375A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPUR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPUR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPUR-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARPUR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473375-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473375A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046136435000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X473375A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473375A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPUR	Weill Cornell Epigenomic Core	PARPUR_D0	X473375A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPUR-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPUR-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPUR-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARPUR-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473375-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473375A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.046136435000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X473375A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473375A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPVU	Weill Cornell Epigenomic Core	PARPVU_relapse	X500397A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPVU-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPVU-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPVU-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARPVU-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500397-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500397A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.124641553	HELP_ALL_cent.ratio.norm.178_L2.txt	X500397A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500397A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPVU	Weill Cornell Epigenomic Core	PARPVU_relapse	X500397A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPVU-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPVU-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPVU-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARPVU-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500397-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500397A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.124641553	HELP_ALL_cent.ratio.norm.178_L2.txt	X500397A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500397A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPVU	Weill Cornell Epigenomic Core	PARPVU_D0	X473347A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPVU-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPVU-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPVU-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARPVU-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473347-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473347A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.043804937000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X473347A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473347A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPVU	Weill Cornell Epigenomic Core	PARPVU_D0	X473347A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPVU-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPVU-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPVU-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-03-31	TARGET-10-PARPVU-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	473347-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	473347A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.043804937000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X473347A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X473347A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPYS	Weill Cornell Epigenomic Core	PARPYS_D0	X500519A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPYS-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPYS-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPYS-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARPYS-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500519-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500519A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057861998999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X500519A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500519A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPYS	Weill Cornell Epigenomic Core	PARPYS_D0	X500519A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPYS-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPYS-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPYS-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARPYS-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500519-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500519A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057861998999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X500519A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500519A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPZJ	Weill Cornell Epigenomic Core	PARPZJ_D0	X500475A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPZJ-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPZJ-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPZJ-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARPZJ-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500475-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500475A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.083670152999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X500475A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500475A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPZJ	Weill Cornell Epigenomic Core	PARPZJ_D0	X500475A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPZJ-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPZJ-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPZJ-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARPZJ-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500475-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500475A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.083670152999999997	HELP_ALL_cent.ratio.norm.178_L2.txt	X500475A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500475A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPZJ	Weill Cornell Epigenomic Core	PARPZJ_relapse	X500517A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPZJ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPZJ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPZJ-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARPZJ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500517-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500517A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061325209999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X500517A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500517A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARPZJ	Weill Cornell Epigenomic Core	PARPZJ_relapse	X500517A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARPZJ-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARPZJ-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARPZJ-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARPZJ-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500517-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500517A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061325209999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X500517A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500517A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARRKW	Weill Cornell Epigenomic Core	PARRKW_relapse	X500669A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARRKW-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARRKW-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARRKW-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARRKW-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500669-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500669A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.054424316	HELP_ALL_cent.ratio.norm.178_L2.txt	X500669A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500669A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARRKW	Weill Cornell Epigenomic Core	PARRKW_relapse	X500669A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARRKW-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARRKW-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARRKW-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARRKW-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500669-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500669A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.054424316	HELP_ALL_cent.ratio.norm.178_L2.txt	X500669A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500669A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARSRH	Weill Cornell Epigenomic Core	PARSRH_relapse	X500524A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARSRH-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARSRH-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARSRH-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARSRH-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500524-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500524A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.081347163	HELP_ALL_cent.ratio.norm.178_L2.txt	X500524A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500524A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARSRH	Weill Cornell Epigenomic Core	PARSRH_relapse	X500524A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARSRH-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARSRH-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARSRH-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARSRH-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500524-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500524A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.081347163	HELP_ALL_cent.ratio.norm.178_L2.txt	X500524A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500524A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARSRH	Weill Cornell Epigenomic Core	PARSRH_D0	X500531A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARSRH-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARSRH-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARSRH-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARSRH-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500531-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500531A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.084470009999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X500531A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500531A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARSRH	Weill Cornell Epigenomic Core	PARSRH_D0	X500531A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARSRH-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARSRH-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARSRH-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARSRH-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500531-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500531A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.084470009999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X500531A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500531A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARTJL	Weill Cornell Epigenomic Core	PARTJL_D0	X500669A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARTJL-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARTJL-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARTJL-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARTJL-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500669-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500669A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.064048127999999996	HELP_ALL_cent.ratio.norm.178_L2.txt	X500669A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500669A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARTJL	Weill Cornell Epigenomic Core	PARTJL_D0	X500669A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARTJL-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARTJL-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARTJL-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARTJL-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500669-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500669A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.064048127999999996	HELP_ALL_cent.ratio.norm.178_L2.txt	X500669A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500669A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARTRW	Weill Cornell Epigenomic Core	PARTRW_D0	X500495A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARTRW-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARTRW-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARTRW-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARTRW-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500495-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500495A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.073603867000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X500495A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500495A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARTRW	Weill Cornell Epigenomic Core	PARTRW_D0	X500495A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARTRW-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARTRW-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARTRW-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARTRW-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500495-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500495A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.073603867000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X500495A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500495A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARTXF	Weill Cornell Epigenomic Core	PARTXF_D0	X500524A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARTXF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARTXF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARTXF-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARTXF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500524-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500524A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.075212089999999995	HELP_ALL_cent.ratio.norm.178_L2.txt	X500524A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500524A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARTXF	Weill Cornell Epigenomic Core	PARTXF_D0	X500524A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARTXF-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARTXF-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARTXF-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARTXF-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500524-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500524A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.075212089999999995	HELP_ALL_cent.ratio.norm.178_L2.txt	X500524A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500524A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARTYT	Weill Cornell Epigenomic Core	PARTYT_D0	X500519A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARTYT-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARTYT-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARTYT-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARTYT-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500519-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500519A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.084061572000000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500519A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500519A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARTYT	Weill Cornell Epigenomic Core	PARTYT_D0	X500519A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARTYT-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARTYT-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARTYT-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARTYT-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500519-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500519A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.084061572000000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500519A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500519A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARTYT	Weill Cornell Epigenomic Core	PARTYT_relapse	X500531A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARTYT-40A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARTYT-40A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARTYT-40A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARTYT-40A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500531-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500531A03_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057283379000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500531A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500531A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARTYT	Weill Cornell Epigenomic Core	PARTYT_relapse	X500531A03_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARTYT-40A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARTYT-40A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARTYT-40A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARTYT-40A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500531-A3	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500531A03_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.057283379000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500531A03_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500531A03_HG19HX3_L3.txt	3	hg19
TARGET-10-PARUBK	Weill Cornell Epigenomic Core	PARUBK_D0	X500462A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARUBK-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARUBK-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARUBK-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARUBK-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500462-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500462A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.14268088300000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500462A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500462A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARUBK	Weill Cornell Epigenomic Core	PARUBK_D0	X500462A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARUBK-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARUBK-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARUBK-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARUBK-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500462-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500462A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.14268088300000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500462A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500462A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARUGP	Weill Cornell Epigenomic Core	PARUGP_D0	X500513A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARUGP-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARUGP-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARUGP-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARUGP-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500513-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500513A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.080896179999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X500513A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500513A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARUGP	Weill Cornell Epigenomic Core	PARUGP_D0	X500513A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARUGP-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARUGP-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARUGP-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARUGP-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500513-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500513A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.080896179999999998	HELP_ALL_cent.ratio.norm.178_L2.txt	X500513A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500513A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PARVMC	Weill Cornell Epigenomic Core	PARVMC_D0	X500669A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARVMC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARVMC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARVMC-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARVMC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500669-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500669A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061495392000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X500669A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500669A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARVMC	Weill Cornell Epigenomic Core	PARVMC_D0	X500669A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARVMC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARVMC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARVMC-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARVMC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500669-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500669A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.061495392000000003	HELP_ALL_cent.ratio.norm.178_L2.txt	X500669A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500669A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARVWD	Weill Cornell Epigenomic Core	PARVWD_D0	X500513A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARVWD-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARVWD-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARVWD-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARVWD-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500513-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500513A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.073152883000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500513A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500513A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARVWD	Weill Cornell Epigenomic Core	PARVWD_D0	X500513A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARVWD-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARVWD-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARVWD-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARVWD-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500513-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500513A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.073152883000000002	HELP_ALL_cent.ratio.norm.178_L2.txt	X500513A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500513A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARXMC	Weill Cornell Epigenomic Core	PARXMC_relapse	X500524A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARXMC-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARXMC-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARXMC-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARXMC-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500524-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500524A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.080947235000000006	HELP_ALL_cent.ratio.norm.178_L2.txt	X500524A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500524A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARXMC	Weill Cornell Epigenomic Core	PARXMC_relapse	X500524A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARXMC-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARXMC-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARXMC-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PARXMC-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500524-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500524A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.080947235000000006	HELP_ALL_cent.ratio.norm.178_L2.txt	X500524A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500524A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARXMC	Weill Cornell Epigenomic Core	PARXMC_D0	X500519A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARXMC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARXMC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARXMC-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARXMC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500519-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500519A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.068940870000000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500519A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500519A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PARXMC	Weill Cornell Epigenomic Core	PARXMC_D0	X500519A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PARXMC-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PARXMC-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PARXMC-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PARXMC-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500519-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500519A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.068940870000000001	HELP_ALL_cent.ratio.norm.178_L2.txt	X500519A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500519A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PASDYK	Weill Cornell Epigenomic Core	PASDYK_D0	X500531A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PASDYK-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PASDYK-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PASDYK-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PASDYK-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500531-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500531A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.072531717999999995	HELP_ALL_cent.ratio.norm.178_L2.txt	X500531A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500531A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PASDYK	Weill Cornell Epigenomic Core	PASDYK_D0	X500531A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PASDYK-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PASDYK-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PASDYK-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-06-03	TARGET-10-PASDYK-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500531-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500531A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.072531717999999995	HELP_ALL_cent.ratio.norm.178_L2.txt	X500531A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500531A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PASFPU	Weill Cornell Epigenomic Core	PASFPU_D0	X500401A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PASFPU-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PASFPU-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PASFPU-09A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PASFPU-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500401-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500401A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.10780201	HELP_ALL_cent.ratio.norm.178_L2.txt	X500401A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500401A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PASFPU	Weill Cornell Epigenomic Core	PASFPU_D0	X500401A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PASFPU-09A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PASFPU-09A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PASFPU-09A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2011-05-25	TARGET-10-PASFPU-09A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	500401-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	500401A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.10780201	HELP_ALL_cent.ratio.norm.178_L2.txt	X500401A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X500401A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PASLZM	Weill Cornell Epigenomic Core	PASLZM_D0	X534375A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PASLZM-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PASLZM-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PASLZM-03A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PASLZM-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534375-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534375A02_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.083372333000000007	HELP_ALL_cent.ratio.norm.178_L2.txt	X534375A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534375A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PASLZM	Weill Cornell Epigenomic Core	PASLZM_D0	X534375A02_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PASLZM-03A	organism part	EFO	Peripheral Blood	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PASLZM-03A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PASLZM-03A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PASLZM-03A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534375-A2	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534375A02_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.083372333000000007	HELP_ALL_cent.ratio.norm.178_L2.txt	X534375A02_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534375A02_HG19HX3_L3.txt	3	hg19
TARGET-10-PASLZM	Weill Cornell Epigenomic Core	PASLZM_relapse	X534375A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PASLZM-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PASLZM-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PASLZM-04A-03D labeled extract	synthetic DNA	EFO	Cy3	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PASLZM-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534375-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534375A01_HG19HX3_532.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.103870798	HELP_ALL_cent.ratio.norm.178_L2.txt	X534375A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534375A01_HG19HX3_L3.txt	3	hg19
TARGET-10-PASLZM	Weill Cornell Epigenomic Core	PASLZM_relapse	X534375A01_HG19HX3	whole organism	EFO	Homo sapiens	NCBITaxon	Recurrent Childhood B Acute Lymphoblastic Leukemia	EFO	Discovery	TARGET-10-PASLZM-04A	organism part	EFO	Bone Marrow	NCIt	ucsf.edu:Protocol:DNA-Extraction-Nimblegen:01	TARGET-10-PASLZM-04A-03D	genomic DNA	EFO	ucsf.edu:Protocol:MethylationArray-Labeling-Nimblegen:01	TARGET-10-PASLZM-04A-03D labeled extract	synthetic DNA	EFO	Cy5	EFO	ucsf.edu:Protocol:MethylationArray-Hybridization-Nimblegen:01	Weill Cornell Epigenomic Core, Yushan Li	2012-01-25	TARGET-10-PASLZM-04A-03D hybridization	microarray	EFO	Nimblegen.com:HG19HX3	534375-A1	GPL16419	ucsf.edu:Protocol:MethylationArray-Scanning-Nimblegen:01	NimbleGen MS 200 Microarray Scanner	534375A01_HG19HX3_635.pair	1	ucsf.edu:Protocol:MethylationArray-DataNormalization-Nimblegen:01	0.103870798	HELP_ALL_cent.ratio.norm.178_L2.txt	X534375A01_HG19HX3	2	nci.nih.gov:CBIIT.OCGDCC.Protocol:MethylationArray-GeneAnnotation:01	X534375A01_HG19HX3_L3.txt	3	hg19
