Source Name	Provider	Material Type	Term Source REF	Characteristics[Organism]	Term Source REF	Characteristics[Sex]	Term Source REF	Characteristics[DiseaseState]	Term Source REF	Comment[OCG Cohort]	Sample Name	Material Type	Term Source REF	Characteristics[OrganismPart]	Term Source REF	Description	Protocol REF	Performer	Extract Name	Material Type	Term Source REF	Comment[SRA_SAMPLE]	Protocol REF	Performer	Extract Name	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_NAME]	Comment[SRA_EXPERIMENT]	Description	Protocol REF	Performer	Assay Name	Technology Type	Term Source REF	Comment[SPOT_LENGTH]	Protocol REF	Parameter Value[Software Versions]	Protocol REF	Parameter Value[Software Versions]	Derived Array Data File	Comment[SRA_RUN]	Comment[SRA_FILE_URI]	Comment[OCG Data Level]	Comment[ASSEMBLY_NAME]	Protocol REF	Derived Array Data File	Comment[OCG Data Level]	Protocol REF	Derived Array Data File	Comment[OCG Data Level]	Protocol REF	Derived Array Data File	Comment[OCG Data Level]
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAISNS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAISNS_NormalVsPrimary.png	4			
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAISNS_NormalVsPrimary.png	4			
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAISNS_NormalVsPrimary.png	4			
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAISNS_NormalVsPrimary.png	4			
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-01A-01D	DNA	EFO	SRS493330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D06	SRX367223		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-01A-01D GS01997-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L08.bam	SRR1015870	@dbgap@:reads/SRP012002/SRS493330/SRX367223/SRR1015870/SRR1015870.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAISNS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAISNS_NormalVsPrimary.png	4			
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAISNS_NormalVsPrimary.png	4			
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAISNS_NormalVsPrimary.png	4			
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAISNS_NormalVsPrimary.png	4			
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAISNS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAISNS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAISNS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISNS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISNS-10A-01D	DNA	EFO	SRS493329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E06	SRX367222		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAISNS-10A-01D GS01997-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L08.bam	SRR1015875	@dbgap@:reads/SRP012002/SRS493329/SRX367222/SRR1015875/SRR1015875.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAIVZR_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIVZR_NormalVsPrimary.png	4			
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIVZR_NormalVsPrimary.png	4			
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIVZR_NormalVsPrimary.png	4			
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIVZR_NormalVsPrimary.png	4			
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-01A-01D	DNA	EFO	SRS301173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B06	SRX226958		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-01A-01D GS01087-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52816-FS3_L01.bam	SRR679101	@dbgap@:reads/SRP012002/SRS301173/SRX226958/SRR679101/SRR679101.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAIVZR_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIVZR_NormalVsPrimary.png	4			
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIVZR_NormalVsPrimary.png	4			
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIVZR_NormalVsPrimary.png	4			
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIVZR_NormalVsPrimary.png	4			
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIVZR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIVZR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAIVZR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVZR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVZR-10A-01D	DNA	EFO	SRS301174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D09	SRX226957	"WARNING: UCV (unusual coverage variation) genome with the following QC observations: There is more variability in 100kb coverage windows than we generally see for normal genomes. The number of CNV segments, the total number of CNV bases, and the rates of novel CNVs are also high. Together these data suggest a reduction in the quality of CNV calls. Statistics measuring the quality of SV, MEI, and small variant calls look completely normal."	completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIVZR-10A-01D GS01087-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54397-FS3_L01.bam	SRR679109	@dbgap@:reads/SRP012002/SRS301174/SRX226957/SRR679109/SRR679109.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAIXFZ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIXFZ_NormalVsPrimary.png	4			
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIXFZ_NormalVsPrimary.png	4			
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIXFZ_NormalVsPrimary.png	4			
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIXFZ_NormalVsPrimary.png	4			
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-01A-01D	DNA	EFO	SRS489888	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D05	SRX363160		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-01A-01D GS01968-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62323-FS3_L01.bam	SRR1008433	@dbgap@:reads/SRP012002/SRS489888/SRX363160/SRR1008433/SRR1008433.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAIXFZ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIXFZ_NormalVsPrimary.png	4			
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIXFZ_NormalVsPrimary.png	4			
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIXFZ_NormalVsPrimary.png	4			
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAIXFZ_NormalVsPrimary.png	4			
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAIXFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAIXFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAIXFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXFZ-10A-01D	DNA	EFO	SRS489887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E05	SRX363159		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAIXFZ-10A-01D GS01968-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62292-FS3_L01.bam	SRR1008440	@dbgap@:reads/SRP012002/SRS489887/SRX363159/SRR1008440/SRR1008440.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAKZRH_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAKZRH_NormalVsPrimary.png	4			
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAKZRH_NormalVsPrimary.png	4			
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAKZRH_NormalVsPrimary.png	4			
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAKZRH_NormalVsPrimary.png	4			
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-01A-01D	DNA	EFO	SRS489892	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F05	SRX363164		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-01A-01D GS01968-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L03.bam	SRR1008461	@dbgap@:reads/SRP012002/SRS489892/SRX363164/SRR1008461/SRR1008461.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAKZRH_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAKZRH_NormalVsPrimary.png	4			
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAKZRH_NormalVsPrimary.png	4			
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAKZRH_NormalVsPrimary.png	4			
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAKZRH_NormalVsPrimary.png	4			
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAKZRH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAKZRH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAKZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRH-10A-01D	DNA	EFO	SRS489891	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G05	SRX363163		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAKZRH-10A-01D GS01968-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62322-FS3_L01.bam	SRR1008468	@dbgap@:reads/SRP012002/SRS489891/SRX363163/SRR1008468/SRR1008468.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PALKXJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALKXJ_NormalVsPrimary.png	4			
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALKXJ_NormalVsPrimary.png	4			
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALKXJ_NormalVsPrimary.png	4			
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALKXJ_NormalVsPrimary.png	4			
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-01A-01D	DNA	EFO	SRS489890	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H05	SRX363162		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-01A-01D GS01968-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62238-FS3_L01.bam	SRR1008447	@dbgap@:reads/SRP012002/SRS489890/SRX363162/SRR1008447/SRR1008447.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PALKXJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALKXJ_NormalVsPrimary.png	4			
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALKXJ_NormalVsPrimary.png	4			
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALKXJ_NormalVsPrimary.png	4			
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALKXJ_NormalVsPrimary.png	4			
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALKXJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALKXJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PALKXJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALKXJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALKXJ-10A-01D	DNA	EFO	SRS489889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A06	SRX363161		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALKXJ-10A-01D GS01968-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62239-FS3_L01.bam	SRR1008454	@dbgap@:reads/SRP012002/SRS489889/SRX363161/SRR1008454/SRR1008454.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PALNVP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALNVP_NormalVsPrimary.png	4			
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALNVP_NormalVsPrimary.png	4			
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALNVP_NormalVsPrimary.png	4			
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALNVP_NormalVsPrimary.png	4			
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-01A-01D	DNA	EFO	SRS489832	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F07	SRX363100		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-01A-01D GS01997-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61474-FS3_L01.bam	SRR1008023	@dbgap@:reads/SRP012002/SRS489832/SRX363100/SRR1008023/SRR1008023.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PALNVP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALNVP_NormalVsPrimary.png	4			
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALNVP_NormalVsPrimary.png	4			
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALNVP_NormalVsPrimary.png	4			
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALNVP_NormalVsPrimary.png	4			
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALNVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALNVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PALNVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNVP-10A-01D	DNA	EFO	SRS489831	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H07	SRX363099		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALNVP-10A-01D GS01997-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L03.bam	SRR1008030	@dbgap@:reads/SRP012002/SRS489831/SRX363099/SRR1008030/SRR1008030.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PALXTB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALXTB_NormalVsPrimary.png	4			
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALXTB_NormalVsPrimary.png	4			
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALXTB_NormalVsPrimary.png	4			
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALXTB_NormalVsPrimary.png	4			
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-01A-01D	DNA	EFO	SRS489844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A08	SRX363112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-01A-01D GS01997-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64876-FS3_L01.bam	SRR1008102	@dbgap@:reads/SRP012002/SRS489844/SRX363112/SRR1008102/SRR1008102.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PALXTB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALXTB_NormalVsPrimary.png	4			
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALXTB_NormalVsPrimary.png	4			
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALXTB_NormalVsPrimary.png	4			
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PALXTB_NormalVsPrimary.png	4			
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PALXTB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PALXTB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PALXTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXTB-10A-01D	DNA	EFO	SRS489843	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B08	SRX363111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PALXTB-10A-01D GS01997-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61473-FS3_L01.bam	SRR1008109	@dbgap@:reads/SRP012002/SRS489843/SRX363111/SRR1008109/SRR1008109.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAMNLH_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAMNLH_NormalVsPrimary.png	4			
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAMNLH_NormalVsPrimary.png	4			
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAMNLH_NormalVsPrimary.png	4			
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAMNLH_NormalVsPrimary.png	4			
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-01A-01D	DNA	EFO	SRS083421	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C08	SRX363122		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-01A-01D GS01997-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63541-FS3_L01.bam	SRR1008170	@dbgap@:reads/SRP012002/SRS083421/SRX363122/SRR1008170/SRR1008170.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAMNLH_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAMNLH_NormalVsPrimary.png	4			
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAMNLH_NormalVsPrimary.png	4			
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAMNLH_NormalVsPrimary.png	4			
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAMNLH_NormalVsPrimary.png	4			
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAMNLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAMNLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAMNLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNLH-10A-01D	DNA	EFO	SRS083420	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D08	SRX363121		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAMNLH-10A-01D GS01997-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63542-FS3_L01.bam	SRR1008176	@dbgap@:reads/SRP012002/SRS083420/SRX363121/SRR1008176/SRR1008176.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PANLET_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANLET_NormalVsPrimary.png	4			
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANLET_NormalVsPrimary.png	4			
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANLET_NormalVsPrimary.png	4			
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANLET_NormalVsPrimary.png	4			
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A12	SRX205037		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-01A-01D GS01104-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55505-FS3_L01.bam	SRR618119	@dbgap@:reads/SRP012002/SRS375959/SRX205037/SRR618119/SRR618119.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PANLET_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANLET_NormalVsPrimary.png	4			
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANLET_NormalVsPrimary.png	4			
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANLET_NormalVsPrimary.png	4			
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANLET_NormalVsPrimary.png	4			
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANLET_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANLET_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B12	SRX205036		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANLET-10A-01D GS01104-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54948-FS3_L01.bam	SRR618126	@dbgap@:reads/SRP012002/SRS375958/SRX205036/SRR618126/SRR618126.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PANNMS-01A-01D HS1794 library	PAIRED	GENOMIC	WGS	RANDOM	HS1794	SRX092685		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PANNMS-01A-01D HS1794 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS1794.bam	SRR498241	@dbgap@:reads/SRP012002/SRS118057/SRX092685/SRR498241/SRR498241.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1794_30_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PANNMS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANNMS_NormalVsPrimary.png	4			
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANNMS_NormalVsPrimary.png	4			
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANNMS_NormalVsPrimary.png	4			
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANNMS_NormalVsPrimary.png	4			
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-01A-01D	DNA	EFO	SRS118057	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E08	SRX368079		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-01A-01D GS01997-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L01.bam	SRR1016901	@dbgap@:reads/SRP012002/SRS118057/SRX368079/SRR1016901/SRR1016901.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PANNMS-10A-01D HS1884 library	PAIRED	GENOMIC	WGS	RANDOM	HS1884	SRX092915		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PANNMS-10A-01D HS1884 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.32.0;Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01	BWA 0.5.7	HS1884.bam	SRR619464	@dbgap@:reads/SRP012002/SRS118059/SRX092915/SRR619464/SRR619464.sra	2	GRCh37-lite	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1884_23_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PANNMS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANNMS_NormalVsPrimary.png	4			
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANNMS_NormalVsPrimary.png	4			
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANNMS_NormalVsPrimary.png	4			
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANNMS_NormalVsPrimary.png	4			
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANNMS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANNMS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PANNMS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANNMS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANNMS-10A-01D	DNA	EFO	SRS118059	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F08	SRX368078		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANNMS-10A-01D GS01997-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63540-FS3_L01.bam	SRR1016908	@dbgap@:reads/SRP012002/SRS118059/SRX368078/SRR1016908/SRR1016908.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PANRRW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRRW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRRW-01A-01D	DNA	EFO	SRS118061	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PANRRW-01A-01D HS1796 library	PAIRED	GENOMIC	WGS	RANDOM	HS1796	SRX092686		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PANRRW-01A-01D HS1796 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS1796.bam	SRR498242	@dbgap@:reads/SRP012002/SRS118061/SRX092686/SRR498242/SRR498242.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1796_30_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PANRRW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRRW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRRW-10A-01D	DNA	EFO	SRS118063	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PANRRW-10A-01D HS1885 library	PAIRED	GENOMIC	WGS	RANDOM	HS1885	SRX092916		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PANRRW-10A-01D HS1885 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.32.0;Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01	BWA 0.5.7	HS1885.bam	SRR619465	@dbgap@:reads/SRP012002/SRS118063/SRX092916/SRR619465/SRR619465.sra	2	GRCh37-lite	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1885_HS2646_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PANRVJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANRVJ_NormalVsPrimary.png	4			
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANRVJ_NormalVsPrimary.png	4			
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANRVJ_NormalVsPrimary.png	4			
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANRVJ_NormalVsPrimary.png	4			
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C12	SRX205047		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-01A-01D GS01104-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54591-FS3_L01.bam	SRR618189	@dbgap@:reads/SRP012002/SRS375969/SRX205047/SRR618189/SRR618189.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PANRVJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANRVJ_NormalVsPrimary.png	4			
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANRVJ_NormalVsPrimary.png	4			
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANRVJ_NormalVsPrimary.png	4			
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PANRVJ_NormalVsPrimary.png	4			
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PANRVJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PANRVJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D12	SRX205046		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PANRVJ-10A-01D GS01104-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54551-FS3_L01.bam	SRR618194	@dbgap@:reads/SRP012002/SRS375968/SRX205046/SRR618194/SRR618194.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PANYGR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYGR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYGR-01A-01D	DNA	EFO	SRS414526	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PANYGR-01A-01D HS1798 library	PAIRED	GENOMIC	WGS	RANDOM	HS1798	SRX092687		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PANYGR-01A-01D HS1798 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS1798.bam	SRR498243	@dbgap@:reads/SRP012002/SRS414526/SRX092687/SRR498243/SRR498243.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1798_HS2644_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PANYGR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYGR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYGR-01A-01D	DNA	EFO	SRS414526	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PANYGR-01A-01D HS2644 library	PAIRED	GENOMIC	WGS	RANDOM	HS2644	SRX092691		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PANYGR-01A-01D HS2644 run	sequencing assay	EFO	175	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS2644.bam	SRR498247	@dbgap@:reads/SRP012002/SRS414526/SRX092691/SRR498247/SRR498247.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1798_HS2644_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PANYGR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYGR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYGR-10A-01D	DNA	EFO	SRS414525	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PANYGR-10A-01D HS1886 library	PAIRED	GENOMIC	WGS	RANDOM	HS1886	SRX092917		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PANYGR-10A-01D HS1886 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1;Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01	BWA 0.5.7	HS1886-1.bam	SRR619463	@dbgap@:reads/SRP012002/SRS414525/SRX092917/SRR619463/SRR619463.sra	2	GRCh37-lite	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1886_22_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPCTS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPCTS_NormalVsPrimary.png	4			
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPCTS_NormalVsPrimary.png	4			
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPCTS_NormalVsPrimary.png	4			
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPCTS_NormalVsPrimary.png	4			
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E12	SRX204528		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-01A-01D GS01104-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54589-FS3_L01.bam	SRR616968	@dbgap@:reads/SRP012002/SRS375441/SRX204528/SRR616968/SRR616968.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPCTS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPCTS_NormalVsPrimary.png	4			
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPCTS_NormalVsPrimary.png	4			
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPCTS_NormalVsPrimary.png	4			
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPCTS_NormalVsPrimary.png	4			
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPCTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPCTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F12	SRX204527		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPCTS-10A-01D GS01104-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54590-FS3_L01.bam	SRR616975	@dbgap@:reads/SRP012002/SRS375440/SRX204527/SRR616975/SRR616975.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPEAV_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPEAV_NormalVsPrimary.png	4			
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPEAV_NormalVsPrimary.png	4			
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPEAV_NormalVsPrimary.png	4			
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPEAV_NormalVsPrimary.png	4			
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-01A-01D	DNA	EFO	SRS493952	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G08	SRX367902		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-01A-01D GS01997-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64900-FS3_L01.bam	SRR1016867	@dbgap@:reads/SRP012002/SRS493952/SRX367902/SRR1016867/SRR1016867.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPEAV_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPEAV_NormalVsPrimary.png	4			
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPEAV_NormalVsPrimary.png	4			
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPEAV_NormalVsPrimary.png	4			
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPEAV_NormalVsPrimary.png	4			
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPEAV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPEAV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPEAV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEAV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEAV-10A-01D	DNA	EFO	SRS493951	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H08	SRX367901		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPEAV-10A-01D GS01997-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63539-FS3_L03.bam	SRR1016874	@dbgap@:reads/SRP012002/SRS493951/SRX367901/SRR1016874/SRR1016874.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPICY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPICY_NormalVsPrimary.png	4			
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPICY_NormalVsPrimary.png	4			
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPICY_NormalVsPrimary.png	4			
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPICY_NormalVsPrimary.png	4			
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-01A-01D	DNA	EFO	SRS489898	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B06	SRX363170		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-01A-01D GS01968-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62382-FS3_L01.bam	SRR1008504	@dbgap@:reads/SRP012002/SRS489898/SRX363170/SRR1008504/SRR1008504.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPICY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPICY_NormalVsPrimary.png	4			
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPICY_NormalVsPrimary.png	4			
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPICY_NormalVsPrimary.png	4			
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPICY_NormalVsPrimary.png	4			
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPICY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPICY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPICY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPICY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPICY-10A-01D	DNA	EFO	SRS489897	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C06	SRX363169		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPICY-10A-01D GS01968-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62383-FS3_L01.bam	SRR1008511	@dbgap@:reads/SRP012002/SRS489897/SRX363169/SRR1008511/SRR1008511.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPKXS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPKXS_NormalVsPrimary.png	4			
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPKXS_NormalVsPrimary.png	4			
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPKXS_NormalVsPrimary.png	4			
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPKXS_NormalVsPrimary.png	4			
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G12	SRX204543		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-01A-01D GS01104-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L03.bam	SRR617022	@dbgap@:reads/SRP012002/SRS375460/SRX204543/SRR617022/SRR617022.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPKXS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPKXS_NormalVsPrimary.png	4			
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPKXS_NormalVsPrimary.png	4			
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPKXS_NormalVsPrimary.png	4			
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPKXS_NormalVsPrimary.png	4			
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPKXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPKXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H12	SRX204542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPKXS-10A-01D GS01104-CLS_H12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54471-FS3_L01.bam	SRR617029	@dbgap@:reads/SRP012002/SRS375459/SRX204542/SRR617029/SRR617029.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPSEI_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSEI_NormalVsPrimary.png	4			
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSEI_NormalVsPrimary.png	4			
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSEI_NormalVsPrimary.png	4			
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSEI_NormalVsPrimary.png	4			
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-01A-01D	DNA	EFO	SRS301187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C04	SRX204954		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-01A-01D GS01087-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L01.bam	SRR617892	@dbgap@:reads/SRP012002/SRS301187/SRX204954/SRR617892/SRR617892.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPSEI_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSEI_NormalVsPrimary.png	4			
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSEI_NormalVsPrimary.png	4			
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSEI_NormalVsPrimary.png	4			
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSEI_NormalVsPrimary.png	4			
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSEI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSEI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPSEI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSEI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSEI-10A-01D	DNA	EFO	SRS301188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D07	SRX204953		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSEI-10A-01D GS01087-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52800-FS3_L01.bam	SRR617900	@dbgap@:reads/SRP012002/SRS301188/SRX204953/SRR617900/SRR617900.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPSKM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSKM_NormalVsPrimary.png	4			
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSKM_NormalVsPrimary.png	4			
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSKM_NormalVsPrimary.png	4			
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSKM_NormalVsPrimary.png	4			
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-01A-01D	DNA	EFO	SRS118069	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_G09	SRX129994		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-01A-01D GS00662-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18431-FS3_L01.bam	SRR445697	@dbgap@:reads/SRP012002/SRS118069/SRX129994/SRR445697/SRR445697.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPSKM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSKM_NormalVsPrimary.png	4			
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSKM_NormalVsPrimary.png	4			
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSKM_NormalVsPrimary.png	4			
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPSKM_NormalVsPrimary.png	4			
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPSKM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPSKM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPSKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSKM-10A-01D	DNA	EFO	SRS118070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A03	SRX129993		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPSKM-10A-01D GS00662-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19103-FS3_L01.bam	SRR445705	@dbgap@:reads/SRP012002/SRS118070/SRX129993/SRR445705/SRR445705.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTAN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTAN_NormalVsPrimary.png	4			
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTAN_NormalVsPrimary.png	4			
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTAN_NormalVsPrimary.png	4			
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTAN_NormalVsPrimary.png	4			
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B02	SRX204191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-01A-01D GS01104-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54704-FS3_L01.bam	SRR616174	@dbgap@:reads/SRP012002/SRS375091/SRX204191/SRR616174/SRR616174.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTAN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTAN_NormalVsPrimary.png	4			
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTAN_NormalVsPrimary.png	4			
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTAN_NormalVsPrimary.png	4			
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTAN_NormalVsPrimary.png	4			
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTAN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTAN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-10A-01D	DNA	EFO	SRS1706104	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C02	SRX204190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTAN-10A-01D GS01104-CLS_C02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54705-FS3_L01.bam	SRR616181	@dbgap@:reads/SRP012002/SRS1706104/SRX204190/SRR616181/SRR616181.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTDH_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTDH_NormalVsPrimary.png	4			
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTDH_NormalVsPrimary.png	4			
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTDH_NormalVsPrimary.png	4			
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTDH_NormalVsPrimary.png	4			
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-01A-01D	DNA	EFO	SRS489840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D06	SRX363108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-01A-01D GS01968-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L03.bam	SRR1008075	@dbgap@:reads/SRP012002/SRS489840/SRX363108/SRR1008075/SRR1008075.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTDH_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTDH_NormalVsPrimary.png	4			
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTDH_NormalVsPrimary.png	4			
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTDH_NormalVsPrimary.png	4			
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTDH_NormalVsPrimary.png	4			
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTDH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTDH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTDH-10A-01D	DNA	EFO	SRS489839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E06	SRX363107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTDH-10A-01D GS01968-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62291-FS3_L01.bam	SRR1008081	@dbgap@:reads/SRP012002/SRS489839/SRX363107/SRR1008081/SRR1008081.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTFZ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTFZ_NormalVsPrimary.png	4			
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTFZ_NormalVsPrimary.png	4			
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTFZ_NormalVsPrimary.png	4			
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTFZ_NormalVsPrimary.png	4			
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C11	SRX204979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-01A-01D GS01104-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54955-FS3_L01.bam	SRR617995	@dbgap@:reads/SRP012002/SRS375904/SRX204979/SRR617995/SRR617995.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTFZ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTFZ_NormalVsPrimary.png	4			
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTFZ_NormalVsPrimary.png	4			
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTFZ_NormalVsPrimary.png	4			
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTFZ_NormalVsPrimary.png	4			
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTFZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTFZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D11	SRX204978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTFZ-10A-01D GS01104-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54956-FS3_L01.bam	SRR618002	@dbgap@:reads/SRP012002/SRS375905/SRX204978/SRR618002/SRR618002.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTIP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTIP_NormalVsPrimary.png	4			
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTIP_NormalVsPrimary.png	4			
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTIP_NormalVsPrimary.png	4			
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTIP_NormalVsPrimary.png	4			
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-01A-01D	DNA	EFO	SRS301189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D04	SRX191978		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-01A-01D GS01087-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52829-FS3_L01.bam	SRR580413	@dbgap@:reads/SRP012002/SRS301189/SRX191978/SRR580413/SRR580413.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTIP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTIP_NormalVsPrimary.png	4			
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTIP_NormalVsPrimary.png	4			
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTIP_NormalVsPrimary.png	4			
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTIP_NormalVsPrimary.png	4			
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTIP-10A-01D	DNA	EFO	SRS301190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E07	SRX191977		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTIP-10A-01D GS01087-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52830-FS3_L03.bam	SRR580420	@dbgap@:reads/SRP012002/SRS301190/SRX191977/SRR580420/SRR580420.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTLD_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLD_NormalVsPrimary.png	4			
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLD_NormalVsPrimary.png	4			
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLD_NormalVsPrimary.png	4			
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLD_NormalVsPrimary.png	4			
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-01A-01D	DNA	EFO	SRS118071	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H09	SRX130066		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-01A-01D GS00662-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18773-FS3_L01.bam	SRR445821	@dbgap@:reads/SRP012002/SRS118071/SRX130066/SRR445821/SRR445821.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTLD_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLD_NormalVsPrimary.png	4			
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLD_NormalVsPrimary.png	4			
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLD_NormalVsPrimary.png	4			
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLD_NormalVsPrimary.png	4			
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLD-10A-01D	DNA	EFO	SRS118072	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C03	SRX130065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLD-10A-01D GS00662-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18433-FS3_L01.bam	SRR445829	@dbgap@:reads/SRP012002/SRS118072/SRX130065/SRR445829/SRR445829.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTLV_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLV_NormalVsPrimary.png	4			
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLV_NormalVsPrimary.png	4			
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLV_NormalVsPrimary.png	4			
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLV_NormalVsPrimary.png	4			
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E11	SRX205041		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-01A-01D GS01104-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54953-FS3_L01.bam	SRR618147	@dbgap@:reads/SRP012002/SRS375963/SRX205041/SRR618147/SRR618147.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTLV_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLV_NormalVsPrimary.png	4			
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLV_NormalVsPrimary.png	4			
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLV_NormalVsPrimary.png	4			
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLV_NormalVsPrimary.png	4			
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F11	SRX205040		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLV-10A-01D GS01104-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54954-FS3_L01.bam	SRR618154	@dbgap@:reads/SRP012002/SRS375962/SRX205040/SRR618154/SRR618154.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTLY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLY_NormalVsPrimary.png	4			
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLY_NormalVsPrimary.png	4			
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLY_NormalVsPrimary.png	4			
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLY_NormalVsPrimary.png	4			
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-01A-01D	DNA	EFO	SRS301191	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E04	SRX202951		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-01A-01D GS01087-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52354-FS3_L01.bam	SRR611449	@dbgap@:reads/SRP012002/SRS301191/SRX202951/SRR611449/SRR611449.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTLY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLY_NormalVsPrimary.png	4			
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLY_NormalVsPrimary.png	4			
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLY_NormalVsPrimary.png	4			
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTLY_NormalVsPrimary.png	4			
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTLY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTLY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLY-10A-01D	DNA	EFO	SRS301192	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F07	SRX202950		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTLY-10A-01D GS01087-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52827-FS3_L01.bam	SRR611456	@dbgap@:reads/SRP012002/SRS301192/SRX202950/SRR611456/SRR611456.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTMM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTMM_NormalVsPrimary.png	4			
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTMM_NormalVsPrimary.png	4			
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTMM_NormalVsPrimary.png	4			
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTMM_NormalVsPrimary.png	4			
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-01A-01D	DNA	EFO	SRS118073	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H05	SRX136600		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-01A-01D GS00662-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18952-FS3_L01.bam	SRR456263	@dbgap@:reads/SRP012002/SRS118073/SRX136600/SRR456263/SRR456263.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPTMM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTMM_NormalVsPrimary.png	4			
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTMM_NormalVsPrimary.png	4			
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTMM_NormalVsPrimary.png	4			
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPTMM_NormalVsPrimary.png	4			
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPTMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPTMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPTMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTMM-10A-01D	DNA	EFO	SRS118074	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D03	SRX136599		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPTMM-10A-01D GS00662-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18890-FS3_L01.bam	SRR456271	@dbgap@:reads/SRP012002/SRS118074/SRX136599/SRR456271/SRR456271.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPUAR_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUAR_NormalVsPrimary.png	4			
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUAR_NormalVsPrimary.png	4			
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUAR_NormalVsPrimary.png	4			
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUAR_NormalVsPrimary.png	4			
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-01A-01D	DNA	EFO	SRS301193	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F04	SRX191982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-01A-01D GS01087-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L03.bam	SRR580441	@dbgap@:reads/SRP012002/SRS301193/SRX191982/SRR580441/SRR580441.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPUAR_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUAR_NormalVsPrimary.png	4			
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUAR_NormalVsPrimary.png	4			
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUAR_NormalVsPrimary.png	4			
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUAR_NormalVsPrimary.png	4			
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUAR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUAR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPUAR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUAR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUAR-10A-01D	DNA	EFO	SRS301194	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H07	SRX191981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUAR-10A-01D GS01087-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52357-FS3_L01.bam	SRR580448	@dbgap@:reads/SRP012002/SRS301194/SRX191981/SRR580448/SRR580448.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPUNH_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUNH_NormalVsPrimary.png	4			
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUNH_NormalVsPrimary.png	4			
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUNH_NormalVsPrimary.png	4			
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUNH_NormalVsPrimary.png	4			
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-01A-01D	DNA	EFO	SRS301195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G04	SRX191980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-01A-01D GS01087-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52355-FS3_L01.bam	SRR580426	@dbgap@:reads/SRP012002/SRS301195/SRX191980/SRR580426/SRR580426.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPUNH_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUNH_NormalVsPrimary.png	4			
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUNH_NormalVsPrimary.png	4			
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUNH_NormalVsPrimary.png	4			
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUNH_NormalVsPrimary.png	4			
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUNH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUNH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPUNH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUNH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUNH-10A-01D	DNA	EFO	SRS301196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A08	SRX191979		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUNH-10A-01D GS01087-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52651-FS3_L01.bam	SRR580434	@dbgap@:reads/SRP012002/SRS301196/SRX191979/SRR580434/SRR580434.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPUTN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUTN_NormalVsPrimary.png	4			
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUTN_NormalVsPrimary.png	4			
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUTN_NormalVsPrimary.png	4			
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUTN_NormalVsPrimary.png	4			
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-01A-01D	DNA	EFO	SRS301197	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H04	SRX192086		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-01A-01D GS01087-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L01.bam	SRR580486	@dbgap@:reads/SRP012002/SRS301197/SRX192086/SRR580486/SRR580486.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPUTN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUTN_NormalVsPrimary.png	4			
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUTN_NormalVsPrimary.png	4			
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUTN_NormalVsPrimary.png	4			
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUTN_NormalVsPrimary.png	4			
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUTN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUTN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPUTN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUTN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUTN-10A-01D	DNA	EFO	SRS301198	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B08	SRX192085		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUTN-10A-01D GS01087-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53291-FS3_L01.bam	SRR580491	@dbgap@:reads/SRP012002/SRS301198/SRX192085/SRR580491/SRR580491.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPUWY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUWY_NormalVsPrimary.png	4			
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUWY_NormalVsPrimary.png	4			
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUWY_NormalVsPrimary.png	4			
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUWY_NormalVsPrimary.png	4			
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D02	SRX204521		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-01A-01D GS01104-CLS_D02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54702-FS3_L01.bam	SRR616921	@dbgap@:reads/SRP012002/SRS375433/SRX204521/SRR616921/SRR616921.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPUWY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUWY_NormalVsPrimary.png	4			
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUWY_NormalVsPrimary.png	4			
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUWY_NormalVsPrimary.png	4			
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPUWY_NormalVsPrimary.png	4			
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPUWY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPUWY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E02	SRX204520		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPUWY-10A-01D GS01104-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54703-FS3_L01.bam	SRR616928	@dbgap@:reads/SRP012002/SRS375432/SRX204520/SRR616928/SRR616928.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPVEB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsPrimary.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsPrimary.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsPrimary.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsPrimary.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-01A-01D	DNA	EFO	SRS492499	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H11	SRX366320		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-01A-01D GS01968-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62512-FS3_L01.bam	SRR1014677	@dbgap@:reads/SRP012002/SRS492499/SRX366320/SRR1014677/SRR1014677.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPVEB_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsRecurrent.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsRecurrent.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsRecurrent.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsRecurrent.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-04A	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-04A-01D	DNA	EFO	SRS492500	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A12	SRX366321		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-04A-01D GS01968-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L01.bam	SRR1014670	@dbgap@:reads/SRP012002/SRS492500/SRX366321/SRR1014670/SRR1014670.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPVEB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsPrimary.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPVEB_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsRecurrent.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsPrimary.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsRecurrent.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsPrimary.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsRecurrent.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsPrimary.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVEB_NormalVsRecurrent.png	4			
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVEB_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVEB_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPVEB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVEB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVEB-10A-01D	DNA	EFO	SRS492498	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B12	SRX366319		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVEB-10A-01D GS01968-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62513-FS3_L01.bam	SRR1014684	@dbgap@:reads/SRP012002/SRS492498/SRX366319/SRR1014684/SRR1014684.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPVFD_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVFD_NormalVsPrimary.png	4			
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVFD_NormalVsPrimary.png	4			
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVFD_NormalVsPrimary.png	4			
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVFD_NormalVsPrimary.png	4			
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F02	SRX226409		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-01A-01D GS01104-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54822-FS3_L01.bam	SRR677354	@dbgap@:reads/SRP012002/SRS379632/SRX226409/SRR677354/SRR677354.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPVFD_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVFD_NormalVsPrimary.png	4			
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVFD_NormalVsPrimary.png	4			
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVFD_NormalVsPrimary.png	4			
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVFD_NormalVsPrimary.png	4			
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVFD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVFD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_E02	SRX226408		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVFD-10A-01D GS01129-CLS_E02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57917-FS3_L01.bam	SRR677361	@dbgap@:reads/SRP012002/SRS380031/SRX226408/SRR677361/SRR677361.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPVRN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVRN_NormalVsPrimary.png	4			
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVRN_NormalVsPrimary.png	4			
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVRN_NormalVsPrimary.png	4			
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVRN_NormalVsPrimary.png	4			
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G11	SRX205039		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-01A-01D GS01104-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55002-FS3_L01.bam	SRR618133	@dbgap@:reads/SRP012002/SRS375961/SRX205039/SRR618133/SRR618133.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPVRN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVRN_NormalVsPrimary.png	4			
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVRN_NormalVsPrimary.png	4			
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVRN_NormalVsPrimary.png	4			
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVRN_NormalVsPrimary.png	4			
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H11	SRX205038		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVRN-10A-01D GS01104-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55003-FS3_L01.bam	SRR618140	@dbgap@:reads/SRP012002/SRS375960/SRX205038/SRR618140/SRR618140.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPVXS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVXS_NormalVsPrimary.png	4			
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVXS_NormalVsPrimary.png	4			
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVXS_NormalVsPrimary.png	4			
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVXS_NormalVsPrimary.png	4			
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H02	SRX204189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-01A-01D GS01104-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54499-FS3_L01.bam	SRR616158	@dbgap@:reads/SRP012002/SRS375089/SRX204189/SRR616158/SRR616158.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPVXS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVXS_NormalVsPrimary.png	4			
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVXS_NormalVsPrimary.png	4			
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVXS_NormalVsPrimary.png	4			
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPVXS_NormalVsPrimary.png	4			
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPVXS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPVXS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A03	SRX204188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPVXS-10A-01D GS01104-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54500-FS3_L03.bam	SRR616167	@dbgap@:reads/SRP012002/SRS375088/SRX204188/SRR616167/SRR616167.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPWUC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPWUC_NormalVsPrimary.png	4			
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPWUC_NormalVsPrimary.png	4			
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPWUC_NormalVsPrimary.png	4			
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPWUC_NormalVsPrimary.png	4			
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-01A-01D	DNA	EFO	SRS301199	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B12	SRX363001		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-01A-01D GS01969-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62157-FS3_L01.bam	SRR1007325	@dbgap@:reads/SRP012002/SRS301199/SRX363001/SRR1007325/SRR1007325.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPWUC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPWUC_NormalVsPrimary.png	4			
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPWUC_NormalVsPrimary.png	4			
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPWUC_NormalVsPrimary.png	4			
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPWUC_NormalVsPrimary.png	4			
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPWUC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPWUC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPWUC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWUC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWUC-10A-01D	DNA	EFO	SRS301200	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A03	SRX363000		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPWUC-10A-01D GS01968-CLS_A03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62156-FS3_L01.bam	SRR1007332	@dbgap@:reads/SRP012002/SRS301200/SRX363000/SRR1007332/SRR1007332.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPZYP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYP_NormalVsPrimary.png	4			
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYP_NormalVsPrimary.png	4			
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYP_NormalVsPrimary.png	4			
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYP_NormalVsPrimary.png	4			
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-01A-01D	DNA	EFO	SRS301201	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A05	SRX191109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-01A-01D GS01087-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52960-FS3_L01.bam	SRR579459	@dbgap@:reads/SRP012002/SRS301201/SRX191109/SRR579459/SRR579459.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPZYP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYP_NormalVsPrimary.png	4			
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYP_NormalVsPrimary.png	4			
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYP_NormalVsPrimary.png	4			
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYP_NormalVsPrimary.png	4			
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPZYP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYP-10A-01D	DNA	EFO	SRS301202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C08	SRX191108		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYP-10A-01D GS01087-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52959-FS3_L01.bam	SRR579467	@dbgap@:reads/SRP012002/SRS301202/SRX191108/SRR579467/SRR579467.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPZYZ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYZ_NormalVsPrimary.png	4			
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYZ_NormalVsPrimary.png	4			
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYZ_NormalVsPrimary.png	4			
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYZ_NormalVsPrimary.png	4			
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B03	SRX204248		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-01A-01D GS01104-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55508-FS3_L01.bam	SRR616287	@dbgap@:reads/SRP012002/SRS375174/SRX204248/SRR616287/SRR616287.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAPZYZ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYZ_NormalVsPrimary.png	4			
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYZ_NormalVsPrimary.png	4			
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYZ_NormalVsPrimary.png	4			
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAPZYZ_NormalVsPrimary.png	4			
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAPZYZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAPZYZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D03	SRX204247		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAPZYZ-10A-01D GS01104-CLS_D03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55423-FS3_L01.bam	SRR616295	@dbgap@:reads/SRP012002/SRS375173/SRX204247/SRR616295/SRR616295.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARABN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARABN_NormalVsPrimary.png	4			
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARABN_NormalVsPrimary.png	4			
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARABN_NormalVsPrimary.png	4			
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARABN_NormalVsPrimary.png	4			
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-01A-01D	DNA	EFO	SRS301203	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C12	SRX363003		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-01A-01D GS01969-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62319-FS3_L01.bam	SRR1007339	@dbgap@:reads/SRP012002/SRS301203/SRX363003/SRR1007339/SRR1007339.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARABN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARABN_NormalVsPrimary.png	4			
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARABN_NormalVsPrimary.png	4			
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARABN_NormalVsPrimary.png	4			
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARABN_NormalVsPrimary.png	4			
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARABN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARABN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARABN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABN-10A-01D	DNA	EFO	SRS301204	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B03	SRX363002		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARABN-10A-01D GS01968-CLS_B03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63696-FS3_L01.bam	SRR1007347	@dbgap@:reads/SRP012002/SRS301204/SRX363002/SRR1007347/SRR1007347.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARACM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACM_NormalVsPrimary.png	4			
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACM_NormalVsPrimary.png	4			
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACM_NormalVsPrimary.png	4			
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACM_NormalVsPrimary.png	4			
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-01A-01D	DNA	EFO	SRS301205	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D12	SRX363005		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-01A-01D GS01969-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62485-FS3_L01.bam	SRR1007354	@dbgap@:reads/SRP012002/SRS301205/SRX363005/SRR1007354/SRR1007354.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARACM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACM_NormalVsPrimary.png	4			
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACM_NormalVsPrimary.png	4			
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACM_NormalVsPrimary.png	4			
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACM_NormalVsPrimary.png	4			
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARACM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACM-10A-01D	DNA	EFO	SRS301206	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C03	SRX363004		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACM-10A-01D GS01968-CLS_C03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62486-FS3_L01.bam	SRR1007361	@dbgap@:reads/SRP012002/SRS301206/SRX363004/SRR1007361/SRR1007361.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARACS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACS_NormalVsPrimary.png	4			
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACS_NormalVsPrimary.png	4			
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACS_NormalVsPrimary.png	4			
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACS_NormalVsPrimary.png	4			
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E03	SRX204430		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-01A-01D GS01104-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55529-FS3_L01.bam	SRR616797	@dbgap@:reads/SRP012002/SRS375332/SRX204430/SRR616797/SRR616797.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARACS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACS_NormalVsPrimary.png	4			
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACS_NormalVsPrimary.png	4			
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACS_NormalVsPrimary.png	4			
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARACS_NormalVsPrimary.png	4			
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARACS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARACS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F03	SRX204429		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARACS-10A-01D GS01104-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55418-FS3_L01.bam	SRR616805	@dbgap@:reads/SRP012002/SRS375331/SRX204429/SRR616805/SRR616805.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARAHE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAHE_NormalVsPrimary.png	4			
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAHE_NormalVsPrimary.png	4			
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAHE_NormalVsPrimary.png	4			
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAHE_NormalVsPrimary.png	4			
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-01A-01D	DNA	EFO	SRS301207	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B05	SRX202701		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-01A-01D GS01087-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52739-FS3_L01.bam	SRR610964	@dbgap@:reads/SRP012002/SRS301207/SRX202701/SRR610964/SRR610964.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARAHE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAHE_NormalVsPrimary.png	4			
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAHE_NormalVsPrimary.png	4			
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAHE_NormalVsPrimary.png	4			
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAHE_NormalVsPrimary.png	4			
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARAHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAHE-10A-01D	DNA	EFO	SRS301208	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D08	SRX202700		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAHE-10A-01D GS01087-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53289-FS3_L03.bam	SRR610971	@dbgap@:reads/SRP012002/SRS301208/SRX202700/SRR610971/SRR610971.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARAMT_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAMT_NormalVsPrimary.png	4			
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAMT_NormalVsPrimary.png	4			
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAMT_NormalVsPrimary.png	4			
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAMT_NormalVsPrimary.png	4			
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G03	SRX204422		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-01A-01D GS01104-CLS_G03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55705-FS3_L01.bam	SRR616733	@dbgap@:reads/SRP012002/SRS375324/SRX204422/SRR616733/SRR616733.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARAMT_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAMT_NormalVsPrimary.png	4			
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAMT_NormalVsPrimary.png	4			
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAMT_NormalVsPrimary.png	4			
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARAMT_NormalVsPrimary.png	4			
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARAMT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARAMT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H03	SRX204421		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARAMT-10A-01D GS01104-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55805-FS3_L01.bam	SRR616741	@dbgap@:reads/SRP012002/SRS375323/SRX204421/SRR616741/SRR616741.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARBAJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsPrimary.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsPrimary.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsPrimary.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsPrimary.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-01A-01D	DNA	EFO	SRS489749	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C12	SRX363013		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-01A-01D GS01968-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62476-FS3_L01.bam	SRR1007420	@dbgap@:reads/SRP012002/SRS489749/SRX363013/SRR1007420/SRR1007420.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARBAJ_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsRecurrent.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsRecurrent.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsRecurrent.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsRecurrent.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-02A-01D	DNA	EFO	SRS489750	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D12	SRX363014		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-02A-01D GS01968-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62475-FS3_L01.bam	SRR1007413	@dbgap@:reads/SRP012002/SRS489750/SRX363014/SRR1007413/SRR1007413.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARBAJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsPrimary.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARBAJ_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsRecurrent.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsPrimary.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsRecurrent.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsPrimary.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsRecurrent.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsPrimary.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBAJ_NormalVsRecurrent.png	4			
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBAJ_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBAJ_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARBAJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBAJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBAJ-10A-01D	DNA	EFO	SRS489748	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E12	SRX363012		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBAJ-10A-01D GS01968-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62477-FS3_L03.bam	SRR1007427	@dbgap@:reads/SRP012002/SRS489748/SRX363012/SRR1007427/SRR1007427.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARBGP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBGP_NormalVsPrimary.png	4			
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBGP_NormalVsPrimary.png	4			
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBGP_NormalVsPrimary.png	4			
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBGP_NormalVsPrimary.png	4			
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A04	SRX204256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-01A-01D GS01104-CLS_A04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55761-FS3_L01.bam	SRR616345	@dbgap@:reads/SRP012002/SRS375182/SRX204256/SRR616345/SRR616345.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARBGP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBGP_NormalVsPrimary.png	4			
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBGP_NormalVsPrimary.png	4			
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBGP_NormalVsPrimary.png	4			
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBGP_NormalVsPrimary.png	4			
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBGP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBGP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B04	SRX204255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBGP-10A-01D GS01104-CLS_B04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55685-FS3_L01.bam	SRR616353	@dbgap@:reads/SRP012002/SRS375181/SRX204255/SRR616353/SRR616353.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARBLH_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBLH_NormalVsPrimary.png	4			
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBLH_NormalVsPrimary.png	4			
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBLH_NormalVsPrimary.png	4			
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBLH_NormalVsPrimary.png	4			
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_H08	SRX363269		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-01A-01D GS02022-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS68010-FS3_L01.bam	SRR1009137	@dbgap@:reads/SRP012002/SRS379847/SRX363269/SRR1009137/SRR1009137.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARBLH_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBLH_NormalVsPrimary.png	4			
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBLH_NormalVsPrimary.png	4			
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBLH_NormalVsPrimary.png	4			
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARBLH_NormalVsPrimary.png	4			
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARBLH_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARBLH_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_B09	SRX363268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARBLH-10A-01D GS02022-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67752-FS3_L01.bam	SRR1009142	@dbgap@:reads/SRP012002/SRS379568/SRX363268/SRR1009142/SRR1009142.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARCWT_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARCWT_NormalVsPrimary.png	4			
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARCWT_NormalVsPrimary.png	4			
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARCWT_NormalVsPrimary.png	4			
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARCWT_NormalVsPrimary.png	4			
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-01A-01D	DNA	EFO	SRS301209	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C05	SRX191105		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-01A-01D GS01087-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52837-FS3_L01.bam	SRR579428	@dbgap@:reads/SRP012002/SRS301209/SRX191105/SRR579428/SRR579428.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARCWT_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARCWT_NormalVsPrimary.png	4			
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARCWT_NormalVsPrimary.png	4			
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARCWT_NormalVsPrimary.png	4			
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARCWT_NormalVsPrimary.png	4			
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARCWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARCWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARCWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCWT-10A-01D	DNA	EFO	SRS301210	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E08	SRX191104		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARCWT-10A-01D GS01087-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52738-FS3_L01.bam	SRR579435	@dbgap@:reads/SRP012002/SRS301210/SRX191104/SRR579435/SRR579435.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARDCK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDCK_NormalVsPrimary.png	4			
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDCK_NormalVsPrimary.png	4			
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDCK_NormalVsPrimary.png	4			
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDCK_NormalVsPrimary.png	4			
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G04	SRX204428		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-01A-01D GS01104-CLS_G04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55363-FS3_L01.bam	SRR616781	@dbgap@:reads/SRP012002/SRS375330/SRX204428/SRR616781/SRR616781.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARDCK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDCK_NormalVsPrimary.png	4			
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDCK_NormalVsPrimary.png	4			
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDCK_NormalVsPrimary.png	4			
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDCK_NormalVsPrimary.png	4			
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDCK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDCK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H04	SRX204427		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDCK-10A-01D GS01104-CLS_H04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55358-FS3_L01.bam	SRR616789	@dbgap@:reads/SRP012002/SRS375329/SRX204427/SRR616789/SRR616789.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARDIW_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDIW_NormalVsPrimary.png	4			
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDIW_NormalVsPrimary.png	4			
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDIW_NormalVsPrimary.png	4			
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDIW_NormalVsPrimary.png	4			
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C04	SRX204426		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-01A-01D GS01104-CLS_C04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54498-FS3_L01.bam	SRR616765	@dbgap@:reads/SRP012002/SRS375328/SRX204426/SRR616765/SRR616765.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARDIW_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDIW_NormalVsPrimary.png	4			
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDIW_NormalVsPrimary.png	4			
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDIW_NormalVsPrimary.png	4			
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDIW_NormalVsPrimary.png	4			
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDIW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDIW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D04	SRX204425		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDIW-10A-01D GS01104-CLS_D04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55680-FS3_L01.bam	SRR616773	@dbgap@:reads/SRP012002/SRS375327/SRX204425/SRR616773/SRR616773.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARDUJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDUJ_NormalVsPrimary.png	4			
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDUJ_NormalVsPrimary.png	4			
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDUJ_NormalVsPrimary.png	4			
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDUJ_NormalVsPrimary.png	4			
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-01A-01D	DNA	EFO	SRS118075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A06	SRX130208		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-01A-01D GS00662-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19100-FS3_L01.bam	SRR446231	@dbgap@:reads/SRP012002/SRS118075/SRX130208/SRR446231/SRR446231.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARDUJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDUJ_NormalVsPrimary.png	4			
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDUJ_NormalVsPrimary.png	4			
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDUJ_NormalVsPrimary.png	4			
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDUJ_NormalVsPrimary.png	4			
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDUJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDUJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARDUJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDUJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDUJ-10A-01D	DNA	EFO	SRS118076	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E03	SRX130207		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDUJ-10A-01D GS00662-CLS_E03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19066-FS3_L01.bam	SRR446239	@dbgap@:reads/SRP012002/SRS118076/SRX130207/SRR446239/SRR446239.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARDYU_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDYU_NormalVsPrimary.png	4			
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDYU_NormalVsPrimary.png	4			
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDYU_NormalVsPrimary.png	4			
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDYU_NormalVsPrimary.png	4			
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_A12	SRX363265		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-01A-01D GS02006-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66261-FS3_L01.bam	SRR1009113	@dbgap@:reads/SRP012002/SRS380070/SRX363265/SRR1009113/SRR1009113.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARDYU_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDYU_NormalVsPrimary.png	4			
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDYU_NormalVsPrimary.png	4			
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDYU_NormalVsPrimary.png	4			
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARDYU_NormalVsPrimary.png	4			
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARDYU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARDYU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_B12	SRX363264		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARDYU-10A-01D GS02006-CLS_B12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66770-FS3_L03.bam	SRR1009120	@dbgap@:reads/SRP012002/SRS380049/SRX363264/SRR1009120/SRR1009120.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAREGK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAREGK_NormalVsPrimary.png	4			
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAREGK_NormalVsPrimary.png	4			
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAREGK_NormalVsPrimary.png	4			
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAREGK_NormalVsPrimary.png	4			
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-01A-01D	DNA	EFO	SRS118077	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B06	SRX130196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-01A-01D GS00662-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19079-FS3_L01.bam	SRR446167	@dbgap@:reads/SRP012002/SRS118077/SRX130196/SRR446167/SRR446167.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAREGK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAREGK_NormalVsPrimary.png	4			
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAREGK_NormalVsPrimary.png	4			
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAREGK_NormalVsPrimary.png	4			
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAREGK_NormalVsPrimary.png	4			
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAREGK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAREGK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAREGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREGK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREGK-10A-01D	DNA	EFO	SRS118078	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F03	SRX130195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAREGK-10A-01D GS00662-CLS_F03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18939-FS3_L01.bam	SRR446175	@dbgap@:reads/SRP012002/SRS118078/SRX130195/SRR446175/SRR446175.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARETE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARETE_NormalVsPrimary.png	4			
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARETE_NormalVsPrimary.png	4			
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARETE_NormalVsPrimary.png	4			
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARETE_NormalVsPrimary.png	4			
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_C12	SRX363271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-01A-01D GS02006-CLS_C12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66374-FS3_L01.bam	SRR1009146	@dbgap@:reads/SRP012002/SRS380082/SRX363271/SRR1009146/SRR1009146.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARETE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARETE_NormalVsPrimary.png	4			
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARETE_NormalVsPrimary.png	4			
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARETE_NormalVsPrimary.png	4			
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARETE_NormalVsPrimary.png	4			
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARETE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARETE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_D12	SRX363270		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARETE-10A-01D GS02006-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66375-FS3_L01.bam	SRR1009153	@dbgap@:reads/SRP012002/SRS380075/SRX363270/SRR1009153/SRR1009153.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARFRE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFRE_NormalVsPrimary.png	4			
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFRE_NormalVsPrimary.png	4			
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFRE_NormalVsPrimary.png	4			
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFRE_NormalVsPrimary.png	4			
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-01A-01D	DNA	EFO	SRS489842	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F06	SRX363110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-01A-01D GS01968-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62493-FS3_L01.bam	SRR1008088	@dbgap@:reads/SRP012002/SRS489842/SRX363110/SRR1008088/SRR1008088.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARFRE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFRE_NormalVsPrimary.png	4			
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFRE_NormalVsPrimary.png	4			
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFRE_NormalVsPrimary.png	4			
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFRE_NormalVsPrimary.png	4			
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFRE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFRE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARFRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFRE-10A-01D	DNA	EFO	SRS489841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G06	SRX363109		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFRE-10A-01D GS01968-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62059-FS3_L01.bam	SRR1008095	@dbgap@:reads/SRP012002/SRS489841/SRX363109/SRR1008095/SRR1008095.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARFWB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFWB_NormalVsPrimary.png	4			
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFWB_NormalVsPrimary.png	4			
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFWB_NormalVsPrimary.png	4			
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFWB_NormalVsPrimary.png	4			
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E04	SRX204424		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-01A-01D GS01104-CLS_E04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55288-FS3_L01.bam	SRR616749	@dbgap@:reads/SRP012002/SRS375326/SRX204424/SRR616749/SRR616749.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARFWB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFWB_NormalVsPrimary.png	4			
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFWB_NormalVsPrimary.png	4			
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFWB_NormalVsPrimary.png	4			
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARFWB_NormalVsPrimary.png	4			
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARFWB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARFWB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F04	SRX204423		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARFWB-10A-01D GS01104-CLS_F04 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54497-FS3_L01.bam	SRR616757	@dbgap@:reads/SRP012002/SRS375325/SRX204423/SRR616757/SRR616757.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARGDJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGDJ_NormalVsPrimary.png	4			
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGDJ_NormalVsPrimary.png	4			
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGDJ_NormalVsPrimary.png	4			
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGDJ_NormalVsPrimary.png	4			
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-01A-01D	DNA	EFO	SRS301211	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G02	SRX363007		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-01A-01D GS01968-CLS_G02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63697-FS3_L01.bam	SRR1007368	@dbgap@:reads/SRP012002/SRS301211/SRX363007/SRR1007368/SRR1007368.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARGDJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGDJ_NormalVsPrimary.png	4			
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGDJ_NormalVsPrimary.png	4			
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGDJ_NormalVsPrimary.png	4			
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGDJ_NormalVsPrimary.png	4			
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGDJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGDJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARGDJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGDJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGDJ-10A-01D	DNA	EFO	SRS301212	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E12	SRX363006		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGDJ-10A-01D GS01969-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62487-FS3_L01.bam	SRR1007376	@dbgap@:reads/SRP012002/SRS301212/SRX363006/SRR1007376/SRR1007376.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARGUX_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGUX_NormalVsPrimary.png	4			
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGUX_NormalVsPrimary.png	4			
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGUX_NormalVsPrimary.png	4			
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGUX_NormalVsPrimary.png	4			
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-01A-01D	DNA	EFO	SRS118079	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C06	SRX130189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-01A-01D GS00662-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19078-FS3_L01.bam	SRR446119	@dbgap@:reads/SRP012002/SRS118079/SRX130189/SRR446119/SRR446119.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARGUX_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGUX_NormalVsPrimary.png	4			
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGUX_NormalVsPrimary.png	4			
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGUX_NormalVsPrimary.png	4			
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARGUX_NormalVsPrimary.png	4			
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARGUX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARGUX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARGUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGUX-10A-01D	DNA	EFO	SRS118080	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00668-CLS_F10	SRX130188		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARGUX-10A-01D GS00668-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS20696-FS3_L01.bam	SRR446127	@dbgap@:reads/SRP012002/SRS118080/SRX130188/SRR446127/SRR446127.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARHAM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsPrimary.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsPrimary.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsPrimary.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsPrimary.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-01A-01D	DNA	EFO	SRS489752	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C09	SRX363016		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-01A-01D GS01969-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62472-FS3_L01.bam	SRR1007442	@dbgap@:reads/SRP012002/SRS489752/SRX363016/SRR1007442/SRR1007442.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARHAM_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsRecurrent.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsRecurrent.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsRecurrent.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsRecurrent.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-02A-01D	DNA	EFO	SRS489753	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D09	SRX363017		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-02A-01D GS01969-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62471-FS3_L01.bam	SRR1007434	@dbgap@:reads/SRP012002/SRS489753/SRX363017/SRR1007434/SRR1007434.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARHAM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsPrimary.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARHAM_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsRecurrent.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsPrimary.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsRecurrent.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsPrimary.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsRecurrent.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsPrimary.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHAM_NormalVsRecurrent.png	4			
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHAM_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHAM_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARHAM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHAM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHAM-10A-01D	DNA	EFO	SRS489751	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E09	SRX363015		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHAM-10A-01D GS01969-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62474-FS3_L01.bam	SRR1007449	@dbgap@:reads/SRP012002/SRS489751/SRX363015/SRR1007449/SRR1007449.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARHYL_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHYL_NormalVsPrimary.png	4			
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHYL_NormalVsPrimary.png	4			
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHYL_NormalVsPrimary.png	4			
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHYL_NormalVsPrimary.png	4			
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-01A-01D	DNA	EFO	SRS301213	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H02	SRX363009		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-01A-01D GS01968-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62288-FS3_L01.bam	SRR1007384	@dbgap@:reads/SRP012002/SRS301213/SRX363009/SRR1007384/SRR1007384.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARHYL_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHYL_NormalVsPrimary.png	4			
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHYL_NormalVsPrimary.png	4			
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHYL_NormalVsPrimary.png	4			
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARHYL_NormalVsPrimary.png	4			
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARHYL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARHYL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARHYL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHYL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHYL-10A-01D	DNA	EFO	SRS301214	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F12	SRX363008		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARHYL-10A-01D GS01969-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62287-FS3_L01.bam	SRR1007391	@dbgap@:reads/SRP012002/SRS301214/SRX363008/SRR1007391/SRR1007391.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARIKF_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIKF_NormalVsPrimary.png	4			
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIKF_NormalVsPrimary.png	4			
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIKF_NormalVsPrimary.png	4			
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIKF_NormalVsPrimary.png	4			
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-01A-01D	DNA	EFO	SRS301215	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D05	SRX202695		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-01A-01D GS01087-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52363-FS3_L01.bam	SRR610921	@dbgap@:reads/SRP012002/SRS301215/SRX202695/SRR610921/SRR610921.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARIKF_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIKF_NormalVsPrimary.png	4			
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIKF_NormalVsPrimary.png	4			
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIKF_NormalVsPrimary.png	4			
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIKF_NormalVsPrimary.png	4			
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIKF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIKF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARIKF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIKF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIKF-10A-01D	DNA	EFO	SRS301216	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F08	SRX202694		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIKF-10A-01D GS01087-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54562-FS3_L01.bam	SRR610928	@dbgap@:reads/SRP012002/SRS301216/SRX202694/SRR610928/SRR610928.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARIRD_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIRD_NormalVsPrimary.png	4			
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIRD_NormalVsPrimary.png	4			
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIRD_NormalVsPrimary.png	4			
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIRD_NormalVsPrimary.png	4			
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-01A-01D	DNA	EFO	SRS118081	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_D06	SRX138873		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-01A-01D GS00662-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18662-FS3_L01.bam	SRR462052	@dbgap@:reads/SRP012002/SRS118081/SRX138873/SRR462052/SRR462052.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARIRD_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIRD_NormalVsPrimary.png	4			
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIRD_NormalVsPrimary.png	4			
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIRD_NormalVsPrimary.png	4			
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARIRD_NormalVsPrimary.png	4			
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARIRD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARIRD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARIRD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARIRD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARIRD-10A-01D	DNA	EFO	SRS118082	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H03	SRX138872		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARIRD-10A-01D GS00662-CLS_H03 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18848-FS3_L01.bam	SRR462060	@dbgap@:reads/SRP012002/SRS118082/SRX138872/SRR462060/SRR462060.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARJVP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARJVP_NormalVsPrimary.png	4			
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARJVP_NormalVsPrimary.png	4			
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARJVP_NormalVsPrimary.png	4			
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARJVP_NormalVsPrimary.png	4			
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-01A-01D	DNA	EFO	SRS489904	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H06	SRX363176		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-01A-01D GS01968-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62299-FS3_L01.bam	SRR1009254	@dbgap@:reads/SRP012002/SRS489904/SRX363176/SRR1009254/SRR1009254.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARJVP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARJVP_NormalVsPrimary.png	4			
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARJVP_NormalVsPrimary.png	4			
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARJVP_NormalVsPrimary.png	4			
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARJVP_NormalVsPrimary.png	4			
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARJVP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARJVP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARJVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJVP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJVP-10A-01D	DNA	EFO	SRS489903	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A07	SRX363175		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARJVP-10A-01D GS01968-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62494-FS3_L01.bam	SRR1008546	@dbgap@:reads/SRP012002/SRS489903/SRX363175/SRR1008546/SRR1008546.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARKGJ_Normal01DVsPrimary01D.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal01DVsPrimary01D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal01DVsPrimary01D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal01DVsPrimary01D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal01DVsPrimary01D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A05	SRX204981		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-01D GS01104-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55440-FS3_L01.bam	SRR618009	@dbgap@:reads/SRP012002/SRS375907/SRX204981/SRR618009/SRR618009.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARKGJ_Normal02DVsPrimary02D.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal02DVsPrimary02D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal02DVsPrimary02D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal02DVsPrimary02D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal02DVsPrimary02D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-02D	DNA	EFO	SRS493535	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D05	SRX367447		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-01A-02D GS01997-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65879-FS3_L01.bam	SRR1016248	@dbgap@:reads/SRP012002/SRS493535/SRX367447/SRR1016248/SRR1016248.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARKGJ_Normal01DVsPrimary01D.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal01DVsPrimary01D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal01DVsPrimary01D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal01DVsPrimary01D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal01DVsPrimary01D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal01DVsPrimary01D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B05	SRX204980		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-01D GS01104-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55690-FS3_L01.bam	SRR618017	@dbgap@:reads/SRP012002/SRS375906/SRX204980/SRR618017/SRR618017.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARKGJ_Normal02DVsPrimary02D.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal02DVsPrimary02D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal02DVsPrimary02D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal02DVsPrimary02D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARKGJ_Normal02DVsPrimary02D.png	4			
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARKGJ_Normal02DVsPrimary02D.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-02D	DNA	EFO	SRS493534	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E05	SRX367446		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARKGJ-10A-02D GS01997-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65942-FS3_L01.bam	SRR1016252	@dbgap@:reads/SRP012002/SRS493534/SRX367446/SRR1016252/SRR1016252.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARMFA_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMFA_NormalVsPrimary.png	4			
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMFA_NormalVsPrimary.png	4			
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMFA_NormalVsPrimary.png	4			
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMFA_NormalVsPrimary.png	4			
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-01A-01D	DNA	EFO	SRS301217	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E05	SRX202705		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-01A-01D GS01087-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52362-FS3_L01.bam	SRR610990	@dbgap@:reads/SRP012002/SRS301217/SRX202705/SRR610990/SRR610990.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARMFA_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMFA_NormalVsPrimary.png	4			
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMFA_NormalVsPrimary.png	4			
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMFA_NormalVsPrimary.png	4			
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMFA_NormalVsPrimary.png	4			
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARMFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMFA-10A-01D	DNA	EFO	SRS301218	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G08	SRX202704		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMFA-10A-01D GS01087-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52961-FS3_L01.bam	SRR610997	@dbgap@:reads/SRP012002/SRS301218/SRX202704/SRR610997/SRR610997.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARMTT_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMTT_NormalVsPrimary.png	4			
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMTT_NormalVsPrimary.png	4			
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMTT_NormalVsPrimary.png	4			
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMTT_NormalVsPrimary.png	4			
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-01A-01D	DNA	EFO	SRS301219	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F05	SRX202707		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-01A-01D GS01087-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53294-FS3_L01.bam	SRR611005	@dbgap@:reads/SRP012002/SRS301219/SRX202707/SRR611005/SRR611005.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARMTT_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMTT_NormalVsPrimary.png	4			
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMTT_NormalVsPrimary.png	4			
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMTT_NormalVsPrimary.png	4			
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARMTT_NormalVsPrimary.png	4			
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARMTT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARMTT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARMTT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMTT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMTT-10A-01D	DNA	EFO	SRS301220	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H08	SRX202706		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARMTT-10A-01D GS01087-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52361-FS3_L01.bam	SRR611013	@dbgap@:reads/SRP012002/SRS301220/SRX202706/SRR611013/SRR611013.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARNCW_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNCW_NormalVsPrimary.png	4			
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNCW_NormalVsPrimary.png	4			
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNCW_NormalVsPrimary.png	4			
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNCW_NormalVsPrimary.png	4			
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-01A-01D	DNA	EFO	SRS301221	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G05	SRX191242		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-01A-01D GS01087-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53292-FS3_L01.bam	SRR579637	@dbgap@:reads/SRP012002/SRS301221/SRX191242/SRR579637/SRR579637.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARNCW_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNCW_NormalVsPrimary.png	4			
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNCW_NormalVsPrimary.png	4			
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNCW_NormalVsPrimary.png	4			
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNCW_NormalVsPrimary.png	4			
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNCW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNCW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARNCW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNCW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNCW-10A-01D	DNA	EFO	SRS301222	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A09	SRX191241		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNCW-10A-01D GS01087-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53293-FS3_L01.bam	SRR579644	@dbgap@:reads/SRP012002/SRS301222/SRX191241/SRR579644/SRR579644.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARNEE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNEE_NormalVsPrimary.png	4			
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNEE_NormalVsPrimary.png	4			
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNEE_NormalVsPrimary.png	4			
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNEE_NormalVsPrimary.png	4			
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-01A-01D	DNA	EFO	SRS301223	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H05	SRX202703		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-01A-01D GS01087-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53194-FS3_L01.bam	SRR610976	@dbgap@:reads/SRP012002/SRS301223/SRX202703/SRR610976/SRR610976.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARNEE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNEE_NormalVsPrimary.png	4			
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNEE_NormalVsPrimary.png	4			
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNEE_NormalVsPrimary.png	4			
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNEE_NormalVsPrimary.png	4			
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNEE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNEE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARNEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNEE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNEE-10A-01D	DNA	EFO	SRS301224	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B09	SRX202702		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNEE-10A-01D GS01087-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52652-FS3_L02.bam	SRR610984	@dbgap@:reads/SRP012002/SRS301224/SRX202702/SRR610984/SRR610984.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARNNC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNNC_NormalVsPrimary.png	4			
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNNC_NormalVsPrimary.png	4			
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNNC_NormalVsPrimary.png	4			
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNNC_NormalVsPrimary.png	4			
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-01A-01D	DNA	EFO	SRS489896	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B07	SRX363168		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-01A-01D GS01968-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62297-FS3_L01.bam	SRR1008490	@dbgap@:reads/SRP012002/SRS489896/SRX363168/SRR1008490/SRR1008490.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARNNC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNNC_NormalVsPrimary.png	4			
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNNC_NormalVsPrimary.png	4			
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNNC_NormalVsPrimary.png	4			
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNNC_NormalVsPrimary.png	4			
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNNC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNNC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARNNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNC-10A-01D	DNA	EFO	SRS489895	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C07	SRX363167		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNNC-10A-01D GS01968-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62298-FS3_L01.bam	SRR1008497	@dbgap@:reads/SRP012002/SRS489895/SRX363167/SRR1008497/SRR1008497.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARNTS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNTS_NormalVsPrimary.png	4			
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNTS_NormalVsPrimary.png	4			
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNTS_NormalVsPrimary.png	4			
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNTS_NormalVsPrimary.png	4			
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_C09	SRX363267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-01A-01D GS02022-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67754-FS3_L01.bam	SRR1009127	@dbgap@:reads/SRP012002/SRS380202/SRX363267/SRR1009127/SRR1009127.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARNTS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNTS_NormalVsPrimary.png	4			
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNTS_NormalVsPrimary.png	4			
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNTS_NormalVsPrimary.png	4			
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARNTS_NormalVsPrimary.png	4			
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARNTS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARNTS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS02022-CLS_A09	SRX363266		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARNTS-10A-01D GS02022-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS67243-FS3_L01.bam	SRR1009131	@dbgap@:reads/SRP012002/SRS380046/SRX363266/SRR1009131/SRR1009131.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARRBU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARRBU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARRBU-01A-01D	DNA	EFO	SRS118083	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PARRBU-01A-01D HS1800 library	PAIRED	GENOMIC	WGS	RANDOM	HS1800	SRX092688		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PARRBU-01A-01D HS1800 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS1800.bam	SRR498244	@dbgap@:reads/SRP012002/SRS118083/SRX092688/SRR498244/SRR498244.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1800_28_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PARRBU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARRBU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARRBU-10A-01D	DNA	EFO	SRS118085	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PARRBU-10A-01D HS1887 library	PAIRED	GENOMIC	WGS	RANDOM	HS1887	SRX092918		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PARRBU-10A-01D HS1887 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1;Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01	BWA 0.5.7	HS1887.bam	SRR619466	@dbgap@:reads/SRP012002/SRS118085/SRX092918/SRR619466/SRR619466.sra	2	GRCh37-lite	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1887_24_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARSEA_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSEA_NormalVsPrimary.png	4			
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSEA_NormalVsPrimary.png	4			
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSEA_NormalVsPrimary.png	4			
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSEA_NormalVsPrimary.png	4			
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-01A-01D	DNA	EFO	SRS301225	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A06	SRX191244		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-01A-01D GS01087-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53196-FS3_L01.bam	SRR579652	@dbgap@:reads/SRP012002/SRS301225/SRX191244/SRR579652/SRR579652.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARSEA_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSEA_NormalVsPrimary.png	4			
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSEA_NormalVsPrimary.png	4			
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSEA_NormalVsPrimary.png	4			
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSEA_NormalVsPrimary.png	4			
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSEA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSEA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARSEA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSEA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSEA-10A-01D	DNA	EFO	SRS301226	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C09	SRX191243		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSEA-10A-01D GS01087-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53195-FS3_L01.bam	SRR579660	@dbgap@:reads/SRP012002/SRS301226/SRX191243/SRR579660/SRR579660.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARSHT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSHT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSHT-01A-01D	DNA	EFO	SRS118087	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PARSHT-01A-01D HS1802 library	PAIRED	GENOMIC	WGS	RANDOM	HS1802	SRX092689		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PARSHT-01A-01D HS1802 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS1802.bam	SRR498245	@dbgap@:reads/SRP012002/SRS118087/SRX092689/SRR498245/SRR498245.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1802_33_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PARSHT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSHT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSHT-10A-01D	DNA	EFO	SRS118089	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PARSHT-10A-01D HS1888 library	PAIRED	GENOMIC	WGS	RANDOM	HS1888	SRX092919		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PARSHT-10A-01D HS1888 run	sequencing assay	EFO	154	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1;Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01	BWA 0.5.7	HS1888.bam	SRR619467	@dbgap@:reads/SRP012002/SRS118089/SRX092919/SRR619467/SRR619467.sra	2	GRCh37-lite	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1888_23_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARSRJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSRJ_NormalVsPrimary.png	4			
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSRJ_NormalVsPrimary.png	4			
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSRJ_NormalVsPrimary.png	4			
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSRJ_NormalVsPrimary.png	4			
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_E12	SRX363094		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-01A-01D GS02006-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66376-FS3_L01.bam	SRR1007979	@dbgap@:reads/SRP012002/SRS380043/SRX363094/SRR1007979/SRR1007979.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARSRJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSRJ_NormalVsPrimary.png	4			
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSRJ_NormalVsPrimary.png	4			
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSRJ_NormalVsPrimary.png	4			
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARSRJ_NormalVsPrimary.png	4			
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARSRJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARSRJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 library	PAIRED	GENOMIC	WGS	RANDOM	GS02006-CLS_F12	SRX363093		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARSRJ-10A-01D GS02006-CLS_F12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS66377-FS3_L01.bam	SRR1007987	@dbgap@:reads/SRP012002/SRS380017/SRX363093/SRR1007987/SRR1007987.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARUXY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARUXY_NormalVsPrimary.png	4			
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARUXY_NormalVsPrimary.png	4			
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARUXY_NormalVsPrimary.png	4			
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARUXY_NormalVsPrimary.png	4			
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-01A-01D	DNA	EFO	SRS301227	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C06	SRX392865		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-01A-01D GS01087-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53188-FS3-L01.bam	SRR1050995	@dbgap@:reads/SRP012002/SRS301227/SRX392865/SRR1050995/SRR1050995.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARUXY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARUXY_NormalVsPrimary.png	4			
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARUXY_NormalVsPrimary.png	4			
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARUXY_NormalVsPrimary.png	4			
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARUXY_NormalVsPrimary.png	4			
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARUXY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARUXY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARUXY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUXY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUXY-10A-01D	DNA	EFO	SRS301228	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G12	SRX393542		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARUXY-10A-01D GS01969-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62281-FS3-L01.bam	SRR1051824	@dbgap@:reads/SRP012002/SRS301228/SRX393542/SRR1051824/SRR1051824.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARVME_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARVME_NormalVsPrimary.png	4			
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARVME_NormalVsPrimary.png	4			
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARVME_NormalVsPrimary.png	4			
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARVME_NormalVsPrimary.png	4			
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-01A-01D	DNA	EFO	SRS301229	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_D06	SRX191107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-01A-01D GS01087-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52953-FS3_L01.bam	SRR579443	@dbgap@:reads/SRP012002/SRS301229/SRX191107/SRR579443/SRR579443.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARVME_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARVME_NormalVsPrimary.png	4			
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARVME_NormalVsPrimary.png	4			
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARVME_NormalVsPrimary.png	4			
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARVME_NormalVsPrimary.png	4			
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARVME_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARVME_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARVME	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVME-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVME-10A-01D	DNA	EFO	SRS301230	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F09	SRX191106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARVME-10A-01D GS01087-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52952-FS3_L01.bam	SRR579451	@dbgap@:reads/SRP012002/SRS301230/SRX191106/SRR579451/SRR579451.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARXLM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARXLM_NormalVsPrimary.png	4			
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARXLM_NormalVsPrimary.png	4			
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARXLM_NormalVsPrimary.png	4			
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARXLM_NormalVsPrimary.png	4			
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-01A-01D	DNA	EFO	SRS301231	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E06	SRX192082		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-01A-01D GS01087-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52809-FS3_L01.bam	SRR580455	@dbgap@:reads/SRP012002/SRS301231/SRX192082/SRR580455/SRR580455.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARXLM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARXLM_NormalVsPrimary.png	4			
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARXLM_NormalVsPrimary.png	4			
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARXLM_NormalVsPrimary.png	4			
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARXLM_NormalVsPrimary.png	4			
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARXLM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARXLM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARXLM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARXLM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARXLM-10A-01D	DNA	EFO	SRS301232	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G09	SRX192081		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARXLM-10A-01D GS01087-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52808-FS3_L01.bam	SRR580463	@dbgap@:reads/SRP012002/SRS301232/SRX192081/SRR580463/SRR580463.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARYNK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARYNK_NormalVsPrimary.png	4			
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARYNK_NormalVsPrimary.png	4			
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARYNK_NormalVsPrimary.png	4			
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARYNK_NormalVsPrimary.png	4			
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C05	SRX204287		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-01A-01D GS01104-CLS_C05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L01.bam	SRR616571	@dbgap@:reads/SRP012002/SRS375196/SRX204287/SRR616571/SRR616571.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARYNK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARYNK_NormalVsPrimary.png	4			
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARYNK_NormalVsPrimary.png	4			
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARYNK_NormalVsPrimary.png	4			
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARYNK_NormalVsPrimary.png	4			
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARYNK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARYNK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D05	SRX204286		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARYNK-10A-01D GS01104-CLS_D05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55660-FS3_L01.bam	SRR616578	@dbgap@:reads/SRP012002/SRS375195/SRX204286/SRR616578/SRR616578.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARZCJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZCJ_NormalVsPrimary.png	4			
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZCJ_NormalVsPrimary.png	4			
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZCJ_NormalVsPrimary.png	4			
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZCJ_NormalVsPrimary.png	4			
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-01A-01D	DNA	EFO	SRS489755	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F09	SRX363019		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-01A-01D GS01969-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61653-FS3_L01.bam	SRR1007463	@dbgap@:reads/SRP012002/SRS489755/SRX363019/SRR1007463/SRR1007463.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARZCJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZCJ_NormalVsPrimary.png	4			
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZCJ_NormalVsPrimary.png	4			
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZCJ_NormalVsPrimary.png	4			
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZCJ_NormalVsPrimary.png	4			
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZCJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZCJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARZCJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZCJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZCJ-10A-01D	DNA	EFO	SRS489754	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A10	SRX363018		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZCJ-10A-01D GS01969-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62470-FS3_L01.bam	SRR1007470	@dbgap@:reads/SRP012002/SRS489754/SRX363018/SRR1007470/SRR1007470.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARZHA_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZHA_NormalVsPrimary.png	4			
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZHA_NormalVsPrimary.png	4			
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZHA_NormalVsPrimary.png	4			
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZHA_NormalVsPrimary.png	4			
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-01A-01D	DNA	EFO	SRS489900	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D07	SRX363172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-01A-01D GS01968-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L03.bam	SRR1008518	@dbgap@:reads/SRP012002/SRS489900/SRX363172/SRR1008518/SRR1008518.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARZHA_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZHA_NormalVsPrimary.png	4			
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZHA_NormalVsPrimary.png	4			
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZHA_NormalVsPrimary.png	4			
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZHA_NormalVsPrimary.png	4			
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZHA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZHA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARZHA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZHA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZHA-10A-01D	DNA	EFO	SRS489899	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E07	SRX363171		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZHA-10A-01D GS01968-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62325-FS3_L01.bam	SRR1008525	@dbgap@:reads/SRP012002/SRS489899/SRX363171/SRR1008525/SRR1008525.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARZIP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZIP_NormalVsPrimary.png	4			
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZIP_NormalVsPrimary.png	4			
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZIP_NormalVsPrimary.png	4			
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZIP_NormalVsPrimary.png	4			
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E05	SRX204609		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-01A-01D GS01104-CLS_E05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55645-FS3_L03.bam	SRR617156	@dbgap@:reads/SRP012002/SRS375561/SRX204609/SRR617156/SRR617156.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PARZIP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZIP_NormalVsPrimary.png	4			
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZIP_NormalVsPrimary.png	4			
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZIP_NormalVsPrimary.png	4			
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PARZIP_NormalVsPrimary.png	4			
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PARZIP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PARZIP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F05	SRX204608		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PARZIP-10A-01D GS01104-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54360-FS3_L01.bam	SRR617163	@dbgap@:reads/SRP012002/SRS375560/SRX204608/SRR617163/SRR617163.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASATK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASATK_NormalVsPrimary.png	4			
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASATK_NormalVsPrimary.png	4			
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASATK_NormalVsPrimary.png	4			
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASATK_NormalVsPrimary.png	4			
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-01A-01D	DNA	EFO	SRS301233	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F06	SRX191111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-01A-01D GS01087-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52070-FS3_L01.bam	SRR579475	@dbgap@:reads/SRP012002/SRS301233/SRX191111/SRR579475/SRR579475.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASATK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASATK_NormalVsPrimary.png	4			
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASATK_NormalVsPrimary.png	4			
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASATK_NormalVsPrimary.png	4			
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASATK_NormalVsPrimary.png	4			
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASATK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASATK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASATK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASATK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASATK-10A-01D	DNA	EFO	SRS301234	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_H09	SRX191110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASATK-10A-01D GS01087-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52806-FS3_L01.bam	SRR579483	@dbgap@:reads/SRP012002/SRS301234/SRX191110/SRR579483/SRR579483.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASAZJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASAZJ_NormalVsPrimary.png	4			
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASAZJ_NormalVsPrimary.png	4			
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASAZJ_NormalVsPrimary.png	4			
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASAZJ_NormalVsPrimary.png	4			
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-01A-01D	DNA	EFO	SRS118091	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_E06	SRX130263		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-01A-01D GS00662-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18921-FS3_L01.bam	SRR446432	@dbgap@:reads/SRP012002/SRS118091/SRX130263/SRR446432/SRR446432.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASAZJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASAZJ_NormalVsPrimary.png	4			
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASAZJ_NormalVsPrimary.png	4			
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASAZJ_NormalVsPrimary.png	4			
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASAZJ_NormalVsPrimary.png	4			
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASAZJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASAZJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASAZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAZJ-10A-01D	DNA	EFO	SRS118092	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_A10	SRX130262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASAZJ-10A-01D GS00662-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19114-FS3_L01.bam	SRR446440	@dbgap@:reads/SRP012002/SRS118092/SRX130262/SRR446440/SRR446440.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASBEN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASBEN_NormalVsPrimary.png	4			
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASBEN_NormalVsPrimary.png	4			
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASBEN_NormalVsPrimary.png	4			
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASBEN_NormalVsPrimary.png	4			
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-01A-01D	DNA	EFO	SRS301235	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_G06	SRX204268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-01A-01D GS01087-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52812-FS3_L01.bam	SRR616433	@dbgap@:reads/SRP012002/SRS301235/SRX204268/SRR616433/SRR616433.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASBEN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASBEN_NormalVsPrimary.png	4			
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASBEN_NormalVsPrimary.png	4			
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASBEN_NormalVsPrimary.png	4			
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASBEN_NormalVsPrimary.png	4			
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASBEN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASBEN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASBEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBEN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBEN-10A-01D	DNA	EFO	SRS301236	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A10	SRX204267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASBEN-10A-01D GS01087-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52788-FS3_L01.bam	SRR616441	@dbgap@:reads/SRP012002/SRS301236/SRX204267/SRR616441/SRR616441.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASCFC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCFC_NormalVsPrimary.png	4			
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCFC_NormalVsPrimary.png	4			
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCFC_NormalVsPrimary.png	4			
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCFC_NormalVsPrimary.png	4			
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-01A-01D	DNA	EFO	SRS489894	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F07	SRX363166		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-01A-01D GS01968-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62296-FS3_L01.bam	SRR1008475	@dbgap@:reads/SRP012002/SRS489894/SRX363166/SRR1008475/SRR1008475.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASCFC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCFC_NormalVsPrimary.png	4			
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCFC_NormalVsPrimary.png	4			
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCFC_NormalVsPrimary.png	4			
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCFC_NormalVsPrimary.png	4			
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCFC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCFC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASCFC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCFC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCFC-10A-01D	DNA	EFO	SRS489893	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H07	SRX363165		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCFC-10A-01D GS01968-CLS_H07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62324-FS3_L01.bam	SRR1008482	@dbgap@:reads/SRP012002/SRS489893/SRX363165/SRR1008482/SRR1008482.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASCKI_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCKI_NormalVsPrimary.png	4			
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCKI_NormalVsPrimary.png	4			
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCKI_NormalVsPrimary.png	4			
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCKI_NormalVsPrimary.png	4			
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-01A-01D	DNA	EFO	SRS118093	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_F06	SRX129642		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-01A-01D GS00662-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18893-FS3_L01.bam	SRR445124	@dbgap@:reads/SRP012002/SRS118093/SRX129642/SRR445124/SRR445124.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASCKI_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCKI_NormalVsPrimary.png	4			
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCKI_NormalVsPrimary.png	4			
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCKI_NormalVsPrimary.png	4			
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCKI_NormalVsPrimary.png	4			
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCKI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCKI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASCKI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCKI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCKI-10A-01D	DNA	EFO	SRS118094	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_B10	SRX129641		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCKI-10A-01D GS00662-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18891-FS3_L01.bam	SRR445132	@dbgap@:reads/SRP012002/SRS118094/SRX129641/SRR445132/SRR445132.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASCLP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCLP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCLP-01A-01D	DNA	EFO	SRS118095	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASCLP-01A-01D HS1784 library	PAIRED	GENOMIC	WGS	RANDOM	HS1784	SRX092684		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASCLP-01A-01D HS1784 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS1784.bam	SRR498240	@dbgap@:reads/SRP012002/SRS118095/SRX092684/SRR498240/SRR498240.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1784_HS2718_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASCLP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCLP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCLP-01A-01D	DNA	EFO	SRS118095	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASCLP-01A-01D HS2718 library	PAIRED	GENOMIC	WGS	RANDOM	HS2718	SRX092692		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASCLP-01A-01D HS2718 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS2718.bam	SRR498248	@dbgap@:reads/SRP012002/SRS118095/SRX092692/SRR498248/SRR498248.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1784_HS2718_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASCLP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCLP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCLP-10A-01D	DNA	EFO	SRS118097	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASCLP-10A-01D HS1603 library	PAIRED	GENOMIC	WGS	RANDOM	HS1603	SRX092914		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASCLP-10A-01D HS1603 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01	BWA 0.5.7	HS1603.bam	SRR619712	@dbgap@:reads/SRP012002/SRS118097/SRX092914/SRR619712/SRR619712.sra	2	GRCh37-lite	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1603_HS2645_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASCTR_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCTR_NormalVsPrimary.png	4			
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCTR_NormalVsPrimary.png	4			
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCTR_NormalVsPrimary.png	4			
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCTR_NormalVsPrimary.png	4			
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-01A-01D	DNA	EFO	SRS489902	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A08	SRX363174		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-01A-01D GS01968-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62384-FS3_L01.bam	SRR1008532	@dbgap@:reads/SRP012002/SRS489902/SRX363174/SRR1008532/SRR1008532.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASCTR_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCTR_NormalVsPrimary.png	4			
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCTR_NormalVsPrimary.png	4			
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCTR_NormalVsPrimary.png	4			
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCTR_NormalVsPrimary.png	4			
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCTR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCTR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASCTR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCTR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCTR-10A-01D	DNA	EFO	SRS489901	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B08	SRX363173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCTR-10A-01D GS01968-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62385-FS3_L01.bam	SRR1008539	@dbgap@:reads/SRP012002/SRS489901/SRX363173/SRR1008539/SRR1008539.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASCUF_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCUF_NormalVsPrimary.png	4			
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCUF_NormalVsPrimary.png	4			
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCUF_NormalVsPrimary.png	4			
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCUF_NormalVsPrimary.png	4			
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-01A-01D	DNA	EFO	SRS301239	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_A07	SRX192090		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-01A-01D GS01087-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L07.bam	SRR580518	@dbgap@:reads/SRP012002/SRS301239/SRX192090/SRR580518/SRR580518.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASCUF_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCUF_NormalVsPrimary.png	4			
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCUF_NormalVsPrimary.png	4			
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCUF_NormalVsPrimary.png	4			
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASCUF_NormalVsPrimary.png	4			
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASCUF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASCUF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASCUF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCUF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCUF-10A-01D	DNA	EFO	SRS301240	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C10	SRX192089		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASCUF-10A-01D GS01087-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53191-FS3_L01.bam	SRR580521	@dbgap@:reads/SRP012002/SRS301240/SRX192089/SRR580521/SRR580521.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASDZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASDZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASDZJ-01A-01D	DNA	EFO	SRS118099	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASDZJ-01A-01D HS1780 library	PAIRED	GENOMIC	WGS	RANDOM	HS1780	SRX092680		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASDZJ-01A-01D HS1780 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.32.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS1780.bam	SRR498236	@dbgap@:reads/SRP012002/SRS118099/SRX092680/SRR498236/SRR498236.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1780_HS2642_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASDZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASDZJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASDZJ-01A-01D	DNA	EFO	SRS118099	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASDZJ-01A-01D HS2642 library	PAIRED	GENOMIC	WGS	RANDOM	HS2642	SRX092690		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASDZJ-01A-01D HS2642 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.32.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS2642.bam	SRR498246	@dbgap@:reads/SRP012002/SRS118099/SRX092690/SRR498246/SRR498246.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1780_HS2642_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASDZJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASDZJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASDZJ-10A-01D	DNA	EFO	SRS118101	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASDZJ-10A-01D HS1599 library	PAIRED	GENOMIC	WGS	RANDOM	HS1599	SRX092910		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASDZJ-10A-01D HS1599 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1;Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01	BWA 0.5.7	HS1599.bam	SRR619715	@dbgap@:reads/SRP012002/SRS118101/SRX092910/SRR619715/SRR619715.sra	2	GRCh37-lite	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1599_29_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASEGA_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASEGA_NormalVsPrimary.png	4			
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASEGA_NormalVsPrimary.png	4			
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASEGA_NormalVsPrimary.png	4			
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASEGA_NormalVsPrimary.png	4			
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G05	SRX205057		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-01A-01D GS01104-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55775-FS3_L01.bam	SRR618201	@dbgap@:reads/SRP012002/SRS375981/SRX205057/SRR618201/SRR618201.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASEGA_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASEGA_NormalVsPrimary.png	4			
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASEGA_NormalVsPrimary.png	4			
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASEGA_NormalVsPrimary.png	4			
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASEGA_NormalVsPrimary.png	4			
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASEGA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASEGA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H05	SRX205056		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASEGA-10A-01D GS01104-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55578-FS3_L01.bam	SRR618209	@dbgap@:reads/SRP012002/SRS375980/SRX205056/SRR618209/SRR618209.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASFGG_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFGG_NormalVsPrimary.png	4			
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFGG_NormalVsPrimary.png	4			
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFGG_NormalVsPrimary.png	4			
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFGG_NormalVsPrimary.png	4			
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A06	SRX204272		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-01A-01D GS01104-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55140-FS3_L01.bam	SRR616463	@dbgap@:reads/SRP012002/SRS375188/SRX204272/SRR616463/SRR616463.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASFGG_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFGG_NormalVsPrimary.png	4			
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFGG_NormalVsPrimary.png	4			
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFGG_NormalVsPrimary.png	4			
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFGG_NormalVsPrimary.png	4			
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFGG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFGG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B06	SRX204271		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFGG-10A-01D GS01104-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55397-FS3_L01.bam	SRR616470	@dbgap@:reads/SRP012002/SRS375187/SRX204271/SRR616470/SRR616470.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASFIC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFIC_NormalVsPrimary.png	4			
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFIC_NormalVsPrimary.png	4			
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFIC_NormalVsPrimary.png	4			
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFIC_NormalVsPrimary.png	4			
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-01A-01D	DNA	EFO	SRS489906	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C08	SRX363178		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-01A-01D GS01968-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62320-FS3_L01.bam	SRR1008553	@dbgap@:reads/SRP012002/SRS489906/SRX363178/SRR1008553/SRR1008553.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASFIC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFIC_NormalVsPrimary.png	4			
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFIC_NormalVsPrimary.png	4			
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFIC_NormalVsPrimary.png	4			
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASFIC_NormalVsPrimary.png	4			
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASFIC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASFIC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASFIC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFIC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFIC-10A-01D	DNA	EFO	SRS489905	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D08	SRX363177		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASFIC-10A-01D GS01968-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62295-FS3_L01.bam	SRR1008561	@dbgap@:reads/SRP012002/SRS489905/SRX363177/SRR1008561/SRR1008561.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASFRV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFRV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFRV-01A-01D	DNA	EFO	SRS118103	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASFRV-01A-01D HS1781 library	PAIRED	GENOMIC	WGS	RANDOM	HS1781	SRX092681		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASFRV-01A-01D HS1781 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.32.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS1781.bam	SRR498237	@dbgap@:reads/SRP012002/SRS118103/SRX092681/SRR498237/SRR498237.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1781_30_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASFRV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFRV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFRV-10A-01D	DNA	EFO	SRS118105	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASFRV-10A-01D HS1600 library	PAIRED	GENOMIC	WGS	RANDOM	HS1600	SRX092911		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASFRV-10A-01D HS1600 run	sequencing assay	EFO	147	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01	BWA 0.5.7	HS1600.bam	SRR619468	@dbgap@:reads/SRP012002/SRS118105/SRX092911/SRR619468/SRR619468.sra	2	GRCh37-lite	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1600_29_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASGAP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsPrimary.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsPrimary.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsPrimary.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsPrimary.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B11	SRX362888		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-01A-01D GS01968-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L03.bam	SRR1006472	@dbgap@:reads/SRP012002/SRS379872/SRX362888/SRR1006472/SRR1006472.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASGAP_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsRecurrent.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsRecurrent.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsRecurrent.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsRecurrent.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-02A-01D	DNA	EFO	SRS489645	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C11	SRX362887		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-02A-01D GS01968-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62517-FS3_L01.bam	SRR1006479	@dbgap@:reads/SRP012002/SRS489645/SRX362887/SRR1006479/SRR1006479.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASGAP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsPrimary.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASGAP_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsRecurrent.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsPrimary.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsRecurrent.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsPrimary.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsRecurrent.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsPrimary.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGAP_NormalVsRecurrent.png	4			
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGAP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGAP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D11	SRX362886		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGAP-10A-01D GS01968-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62265-FS3_L01.bam	SRR1006486	@dbgap@:reads/SRP012002/SRS379876/SRX362886/SRR1006486/SRR1006486.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PASGPY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGPY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGPY-01A-01D	DNA	EFO	SRS118107	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASGPY-01A-01D HS1782 library	PAIRED	GENOMIC	WGS	RANDOM	HS1782	SRX092682		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASGPY-01A-01D HS1782 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS1782.bam	SRR498238	@dbgap@:reads/SRP012002/SRS118107/SRX092682/SRR498238/SRR498238.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1782_31_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASGPY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGPY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGPY-10A-01D	DNA	EFO	SRS118109	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASGPY-10A-01D HS1601 library	PAIRED	GENOMIC	WGS	RANDOM	HS1601	SRX092912		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASGPY-10A-01D HS1601 run	sequencing assay	EFO	150	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.32.0;Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01	BWA 0.5.7	HS1601.1.bam	SRR620232	@dbgap@:reads/SRP012002/SRS118109/SRX092912/SRR620232/SRR620232.sra	2	GRCh37-lite	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1601_25_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASGUT_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGUT_NormalVsPrimary.png	4			
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGUT_NormalVsPrimary.png	4			
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGUT_NormalVsPrimary.png	4			
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGUT_NormalVsPrimary.png	4			
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C06	SRX204260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-01A-01D GS01104-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54618-FS3_L01.bam	SRR616375	@dbgap@:reads/SRP012002/SRS375184/SRX204260/SRR616375/SRR616375.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASGUT_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGUT_NormalVsPrimary.png	4			
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGUT_NormalVsPrimary.png	4			
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGUT_NormalVsPrimary.png	4			
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASGUT_NormalVsPrimary.png	4			
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASGUT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASGUT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D06	SRX204259		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASGUT-10A-01D GS01104-CLS_D06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54619-FS3_L01.bam	SRR616383	@dbgap@:reads/SRP012002/SRS375183/SRX204259/SRR616383/SRR616383.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASHFA_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsPrimary.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsPrimary.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsPrimary.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsPrimary.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-01A-01D	DNA	EFO	SRS489643	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E11	SRX362884		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-01A-01D GS01968-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62515-FS3_L01.bam	SRR1006457	@dbgap@:reads/SRP012002/SRS489643/SRX362884/SRR1006457/SRR1006457.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASHFA_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsRecurrent.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsRecurrent.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsRecurrent.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsRecurrent.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-02A-01D	DNA	EFO	SRS489644	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F11	SRX362885		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-02A-01D GS01968-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62514-FS3_L01.bam	SRR1006450	@dbgap@:reads/SRP012002/SRS489644/SRX362885/SRR1006450/SRR1006450.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASHFA_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsPrimary.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASHFA_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsRecurrent.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsPrimary.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsRecurrent.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsPrimary.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsRecurrent.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsPrimary.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASHFA_NormalVsRecurrent.png	4			
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASHFA_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASHFA_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASHFA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASHFA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASHFA-10A-01D	DNA	EFO	SRS489642	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G11	SRX362883		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASHFA-10A-01D GS01968-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62516-FS3_L01.bam	SRR1006464	@dbgap@:reads/SRP012002/SRS489642/SRX362883/SRR1006464/SRR1006464.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASJYB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJYB_NormalVsPrimary.png	4			
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJYB_NormalVsPrimary.png	4			
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJYB_NormalVsPrimary.png	4			
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJYB_NormalVsPrimary.png	4			
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-01A-01D	DNA	EFO	SRS301241	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_B07	SRX192084		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-01A-01D GS01087-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53193-FS3_L01.bam	SRR580471	@dbgap@:reads/SRP012002/SRS301241/SRX192084/SRR580471/SRR580471.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASJYB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJYB_NormalVsPrimary.png	4			
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJYB_NormalVsPrimary.png	4			
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJYB_NormalVsPrimary.png	4			
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJYB_NormalVsPrimary.png	4			
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJYB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJYB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASJYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJYB-10A-01D	DNA	EFO	SRS301242	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_E10	SRX192083		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJYB-10A-01D GS01087-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS53124-FS3_L01.bam	SRR580478	@dbgap@:reads/SRP012002/SRS301242/SRX192083/SRR580478/SRR580478.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASJZC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJZC_NormalVsPrimary.png	4			
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJZC_NormalVsPrimary.png	4			
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJZC_NormalVsPrimary.png	4			
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJZC_NormalVsPrimary.png	4			
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-01A-01D	DNA	EFO	SRS489908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E08	SRX363180		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-01A-01D GS01968-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62310-FS3_L01.bam	SRR1008569	@dbgap@:reads/SRP012002/SRS489908/SRX363180/SRR1008569/SRR1008569.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASJZC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJZC_NormalVsPrimary.png	4			
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJZC_NormalVsPrimary.png	4			
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJZC_NormalVsPrimary.png	4			
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASJZC_NormalVsPrimary.png	4			
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASJZC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASJZC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASJZC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASJZC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASJZC-10A-01D	DNA	EFO	SRS489907	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F08	SRX363179		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASJZC-10A-01D GS01968-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62313-FS3_L01.bam	SRR1008576	@dbgap@:reads/SRP012002/SRS489907/SRX363179/SRR1008576/SRR1008576.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASKJX_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASKJX_NormalVsPrimary.png	4			
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASKJX_NormalVsPrimary.png	4			
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASKJX_NormalVsPrimary.png	4			
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASKJX_NormalVsPrimary.png	4			
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-01A-01D	DNA	EFO	SRS301243	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_C07	SRX192088		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-01A-01D GS01087-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52957-FS3_L01.bam	SRR580498	@dbgap@:reads/SRP012002/SRS301243/SRX192088/SRR580498/SRR580498.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASKJX_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASKJX_NormalVsPrimary.png	4			
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASKJX_NormalVsPrimary.png	4			
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASKJX_NormalVsPrimary.png	4			
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASKJX_NormalVsPrimary.png	4			
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASKJX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASKJX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASKJX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKJX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKJX-10A-01D	DNA	EFO	SRS301244	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01087-CLS_F10	SRX192087		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASKJX-10A-01D GS01087-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS52956-FS3_L01.bam	SRR580505	@dbgap@:reads/SRP012002/SRS301244/SRX192087/SRR580505/SRR580505.sra	2	GRCh37	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASLGS-01A-01D HS1783 library	PAIRED	GENOMIC	WGS	RANDOM	HS1783	SRX092683		bcgsc.ca:Protocol:WGS-Sequence-Illumina-HiSeq2000:01	BCCA	TARGET-30-PASLGS-01A-01D HS1783 run	sequencing assay	EFO	162	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.10.36.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01		HS1783.bam	SRR498239	@dbgap@:reads/SRP012002/SRS118111/SRX092683/SRR498239/SRR498239.sra	2	GRCh37	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1783_36_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASLGS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASLGS_NormalVsPrimary.png	4			
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASLGS_NormalVsPrimary.png	4			
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASLGS_NormalVsPrimary.png	4			
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASLGS_NormalVsPrimary.png	4			
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-01A-01D	DNA	EFO	SRS118111	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_H06	SRX128374		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-01A-01D GS00662-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS19076-FS3_L01.bam	SRR442767	@dbgap@:reads/SRP012002/SRS118111/SRX128374/SRR442767/SRR442767.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	bcgsc.ca:Protocol:WGS-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-30-PASLGS-10A-01D HS1602 library	PAIRED	GENOMIC	WGS	RANDOM	HS1602	SRX092913		bcgsc.ca:Protocol:WGS-Sequence-Illumina-GAIIx:01	BCCA	TARGET-30-PASLGS-10A-01D HS1602 run	sequencing assay	EFO	162	bcgsc.ca:Protocol:WGS-BaseCall-Illumina:01	Illumina RTA 1.6.47.1;Illumina RTA 1.5.35.0	bcgsc.ca:Protocol:WGS-ReadAlign-BWA-Picard:01	BWA 0.5.7	HS1602.1.bam	SRR620231	@dbgap@:reads/SRP012002/SRS118113/SRX092913/SRR620231/SRR620231.sra	2	GRCh37-lite	bcgsc.ca:Protocol:WGS-VariantCall:01	HS1602_32_lanes_dupsFlagged.varFilter.anno.maf.txt	3						
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASLGS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASLGS_NormalVsPrimary.png	4			
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASLGS_NormalVsPrimary.png	4			
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASLGS_NormalVsPrimary.png	4			
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASLGS_NormalVsPrimary.png	4			
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASLGS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASLGS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASLGS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASLGS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASLGS-10A-01D	DNA	EFO	SRS118113	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS00662-CLS_C10	SRX128373		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASLGS-10A-01D GS00662-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS18920-FS3_L01.bam	SRR442775	@dbgap@:reads/SRP012002/SRS118113/SRX128373/SRR442775/SRR442775.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASMDM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASMDM_NormalVsPrimary.png	4			
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASMDM_NormalVsPrimary.png	4			
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASMDM_NormalVsPrimary.png	4			
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASMDM_NormalVsPrimary.png	4			
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-01A-01D	DNA	EFO	SRS528138	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02073-CLS_B02	SRX424466		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-01A-01D GS02073-CLS_B02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS71447-FS3_L01.bam	SRR1105709	@dbgap@:reads/SRP012002/SRS528138/SRX424466/SRR1105709/SRR1105709.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASMDM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASMDM_NormalVsPrimary.png	4			
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASMDM_NormalVsPrimary.png	4			
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASMDM_NormalVsPrimary.png	4			
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASMDM_NormalVsPrimary.png	4			
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASMDM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASMDM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASMDM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMDM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMDM-10A-01D	DNA	EFO	SRS528137	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 library	PAIRED	GENOMIC	WGS	RANDOM	GS02064-CLS_H02	SRX424465		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASMDM-10A-01D GS02064-CLS_H02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS72302-FS3_L03.bam	SRR1105716	@dbgap@:reads/SRP012002/SRS528137/SRX424465/SRR1105716/SRR1105716.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASNEF_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNEF_NormalVsPrimary.png	4			
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNEF_NormalVsPrimary.png	4			
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNEF_NormalVsPrimary.png	4			
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNEF_NormalVsPrimary.png	4			
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H10	SRX366315		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-01A-01D GS01969-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L03.bam	SRR1014649	@dbgap@:reads/SRP012002/SRS380875/SRX366315/SRR1014649/SRR1014649.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASNEF_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNEF_NormalVsPrimary.png	4			
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNEF_NormalVsPrimary.png	4			
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNEF_NormalVsPrimary.png	4			
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNEF_NormalVsPrimary.png	4			
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNEF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNEF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A11	SRX366314		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNEF-10A-01D GS01969-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62509-FS3_L01.bam	SRR1014656	@dbgap@:reads/SRP012002/SRS380855/SRX366314/SRR1014656/SRR1014656.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASNML_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNML_NormalVsPrimary.png	4			
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNML_NormalVsPrimary.png	4			
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNML_NormalVsPrimary.png	4			
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNML_NormalVsPrimary.png	4			
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-01A-01D	DNA	EFO	SRS489910	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G08	SRX363182		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-01A-01D GS01968-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L03.bam	SRR1008583	@dbgap@:reads/SRP012002/SRS489910/SRX363182/SRR1008583/SRR1008583.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASNML_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNML_NormalVsPrimary.png	4			
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNML_NormalVsPrimary.png	4			
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNML_NormalVsPrimary.png	4			
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNML_NormalVsPrimary.png	4			
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASNML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNML-10A-01D	DNA	EFO	SRS489909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H08	SRX363181		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNML-10A-01D GS01968-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62317-FS3_L01.bam	SRR1008590	@dbgap@:reads/SRP012002/SRS489909/SRX363181/SRR1008590/SRR1008590.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASNPG_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsPrimary.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsPrimary.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsPrimary.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsPrimary.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-01A-01D	DNA	EFO	SRS489758	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B10	SRX363022		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-01A-01D GS01969-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62264-FS3_L01.bam	SRR1007484	@dbgap@:reads/SRP012002/SRS489758/SRX363022/SRR1007484/SRR1007484.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASNPG_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsRecurrent.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsRecurrent.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsRecurrent.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsRecurrent.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-02A-01D	DNA	EFO	SRS489759	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C10	SRX363023		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-02A-01D GS01969-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62263-FS3_L01.bam	SRR1007477	@dbgap@:reads/SRP012002/SRS489759/SRX363023/SRR1007477/SRR1007477.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASNPG_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsPrimary.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASNPG_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsRecurrent.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsPrimary.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsRecurrent.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsPrimary.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsRecurrent.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsPrimary.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNPG_NormalVsRecurrent.png	4			
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNPG_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNPG_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASNPG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNPG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNPG-10A-01D	DNA	EFO	SRS489757	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D10	SRX363021		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNPG-10A-01D GS01969-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62468-FS3_L01.bam	SRR1007491	@dbgap@:reads/SRP012002/SRS489757/SRX363021/SRR1007491/SRR1007491.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASNZU_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNZU_NormalVsPrimary.png	4			
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNZU_NormalVsPrimary.png	4			
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNZU_NormalVsPrimary.png	4			
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNZU_NormalVsPrimary.png	4			
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E06	SRX204111		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-01A-01D GS01104-CLS_E06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L03.bam	SRR616011	@dbgap@:reads/SRP012002/SRS375011/SRX204111/SRR616011/SRR616011.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASNZU_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNZU_NormalVsPrimary.png	4			
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNZU_NormalVsPrimary.png	4			
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNZU_NormalVsPrimary.png	4			
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASNZU_NormalVsPrimary.png	4			
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASNZU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASNZU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F06	SRX204110		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASNZU-10A-01D GS01104-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54617-FS3_L01.bam	SRR616018	@dbgap@:reads/SRP012002/SRS375010/SRX204110/SRR616018/SRR616018.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASPBZ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPBZ_NormalVsPrimary.png	4			
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPBZ_NormalVsPrimary.png	4			
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPBZ_NormalVsPrimary.png	4			
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPBZ_NormalVsPrimary.png	4			
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-01A-01D	DNA	EFO	SRS489918	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A09	SRX363190		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-01A-01D GS01968-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62812-FS3_L01.bam	SRR1008641	@dbgap@:reads/SRP012002/SRS489918/SRX363190/SRR1008641/SRR1008641.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASPBZ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPBZ_NormalVsPrimary.png	4			
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPBZ_NormalVsPrimary.png	4			
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPBZ_NormalVsPrimary.png	4			
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPBZ_NormalVsPrimary.png	4			
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPBZ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPBZ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASPBZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPBZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPBZ-10A-01D	DNA	EFO	SRS489917	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B09	SRX363189		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPBZ-10A-01D GS01968-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62315-FS3_L01.bam	SRR1008648	@dbgap@:reads/SRP012002/SRS489917/SRX363189/SRR1008648/SRR1008648.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASPER_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPER_NormalVsPrimary.png	4			
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPER_NormalVsPrimary.png	4			
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPER_NormalVsPrimary.png	4			
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPER_NormalVsPrimary.png	4			
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H06	SRX204254		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-01A-01D GS01104-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54596-FS3_L01.bam	SRR616331	@dbgap@:reads/SRP012002/SRS375180/SRX204254/SRR616331/SRR616331.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASPER_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPER_NormalVsPrimary.png	4			
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPER_NormalVsPrimary.png	4			
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPER_NormalVsPrimary.png	4			
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASPER_NormalVsPrimary.png	4			
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASPER_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASPER_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A07	SRX204253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASPER-10A-01D GS01104-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55141-FS3_L01.bam	SRR616338	@dbgap@:reads/SRP012002/SRS375179/SRX204253/SRR616338/SRR616338.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASREY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASREY_NormalVsPrimary.png	4			
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASREY_NormalVsPrimary.png	4			
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASREY_NormalVsPrimary.png	4			
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASREY_NormalVsPrimary.png	4			
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-01A-01D	DNA	EFO	SRS489920	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_C09	SRX363192		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-01A-01D GS01968-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62178-FS3_L01.bam	SRR1008655	@dbgap@:reads/SRP012002/SRS489920/SRX363192/SRR1008655/SRR1008655.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASREY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASREY_NormalVsPrimary.png	4			
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASREY_NormalVsPrimary.png	4			
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASREY_NormalVsPrimary.png	4			
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASREY_NormalVsPrimary.png	4			
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASREY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASREY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASREY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASREY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASREY-10A-01D	DNA	EFO	SRS489919	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_D09	SRX363191		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASREY-10A-01D GS01968-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61939-FS3_L01.bam	SRR1008663	@dbgap@:reads/SRP012002/SRS489919/SRX363191/SRR1008663/SRR1008663.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASRFS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASRFS_NormalVsPrimary.png	4			
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASRFS_NormalVsPrimary.png	4			
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASRFS_NormalVsPrimary.png	4			
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASRFS_NormalVsPrimary.png	4			
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B07	SRX204252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-01A-01D GS01104-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55409-FS3_L01.bam	SRR616317	@dbgap@:reads/SRP012002/SRS375178/SRX204252/SRR616317/SRR616317.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASRFS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASRFS_NormalVsPrimary.png	4			
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASRFS_NormalVsPrimary.png	4			
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASRFS_NormalVsPrimary.png	4			
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASRFS_NormalVsPrimary.png	4			
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASRFS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASRFS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C07	SRX204251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASRFS-10A-01D GS01104-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55383-FS3_L01.bam	SRR616324	@dbgap@:reads/SRP012002/SRS375177/SRX204251/SRR616324/SRR616324.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASSRN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRN_NormalVsPrimary.png	4			
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRN_NormalVsPrimary.png	4			
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRN_NormalVsPrimary.png	4			
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRN_NormalVsPrimary.png	4			
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_B11	SRX366290		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-01A-01D GS01969-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62261-FS3_L01.bam	SRR1014604	@dbgap@:reads/SRP012002/SRS380837/SRX366290/SRR1014604/SRR1014604.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASSRN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRN_NormalVsPrimary.png	4			
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRN_NormalVsPrimary.png	4			
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRN_NormalVsPrimary.png	4			
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRN_NormalVsPrimary.png	4			
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_C11	SRX366289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRN-10A-01D GS01969-CLS_C11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62508-FS3_L01.bam	SRR1014611	@dbgap@:reads/SRP012002/SRS380844/SRX366289/SRR1014611/SRR1014611.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASSRS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRS_NormalVsPrimary.png	4			
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRS_NormalVsPrimary.png	4			
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRS_NormalVsPrimary.png	4			
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRS_NormalVsPrimary.png	4			
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D07	SRX204250		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-01A-01D GS01104-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55448-FS3_L01.bam	SRR616303	@dbgap@:reads/SRP012002/SRS375175/SRX204250/SRR616303/SRR616303.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASSRS_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRS_NormalVsPrimary.png	4			
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRS_NormalVsPrimary.png	4			
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRS_NormalVsPrimary.png	4			
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSRS_NormalVsPrimary.png	4			
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSRS_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSRS_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E07	SRX204249		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSRS-10A-01D GS01104-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55413-FS3_L01.bam	SRR616310	@dbgap@:reads/SRP012002/SRS375176/SRX204249/SRR616310/SRR616310.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASSWW_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSWW_NormalVsPrimary.png	4			
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSWW_NormalVsPrimary.png	4			
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSWW_NormalVsPrimary.png	4			
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSWW_NormalVsPrimary.png	4			
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-01A-01D	DNA	EFO	SRS489922	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E09	SRX363194		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-01A-01D GS01968-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62176-FS3_L01.bam	SRR1008670	@dbgap@:reads/SRP012002/SRS489922/SRX363194/SRR1008670/SRR1008670.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASSWW_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSWW_NormalVsPrimary.png	4			
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSWW_NormalVsPrimary.png	4			
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSWW_NormalVsPrimary.png	4			
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASSWW_NormalVsPrimary.png	4			
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASSWW_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASSWW_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASSWW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWW-10A-01D	DNA	EFO	SRS489921	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F09	SRX363193		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASSWW-10A-01D GS01968-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62177-FS3_L01.bam	SRR1008677	@dbgap@:reads/SRP012002/SRS489921/SRX363193/SRR1008677/SRR1008677.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASTCN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTCN_NormalVsPrimary.png	4			
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTCN_NormalVsPrimary.png	4			
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTCN_NormalVsPrimary.png	4			
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTCN_NormalVsPrimary.png	4			
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F07	SRX204262		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-01A-01D GS01104-CLS_F07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L03.bam	SRR616391	@dbgap@:reads/SRP012002/SRS375186/SRX204262/SRR616391/SRR616391.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASTCN_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTCN_NormalVsPrimary.png	4			
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTCN_NormalVsPrimary.png	4			
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTCN_NormalVsPrimary.png	4			
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTCN_NormalVsPrimary.png	4			
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTCN_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTCN_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G07	SRX204261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTCN-10A-01D GS01104-CLS_G07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55368-FS3_L01.bam	SRR616398	@dbgap@:reads/SRP012002/SRS375185/SRX204261/SRR616398/SRR616398.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASTKC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTKC_NormalVsPrimary.png	4			
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTKC_NormalVsPrimary.png	4			
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTKC_NormalVsPrimary.png	4			
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTKC_NormalVsPrimary.png	4			
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 library	PAIRED	GENOMIC	WGS	RANDOM	GS01129-CLS_F02	SRX226173		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-01A-01D GS01129-CLS_F02 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS57916-FS3_L02.bam	SRR676198	@dbgap@:reads/SRP012002/SRS380879/SRX226173/SRR676198/SRR676198.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASTKC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTKC_NormalVsPrimary.png	4			
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTKC_NormalVsPrimary.png	4			
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTKC_NormalVsPrimary.png	4			
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASTKC_NormalVsPrimary.png	4			
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASTKC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASTKC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A08	SRX226172		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASTKC-10A-01D GS01104-CLS_A08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55398-FS3_L01.bam	SRR676204	@dbgap@:reads/SRP012002/SRS380856/SRX226172/SRR676204/SRR676204.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASUCB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUCB_NormalVsPrimary.png	4			
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUCB_NormalVsPrimary.png	4			
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUCB_NormalVsPrimary.png	4			
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUCB_NormalVsPrimary.png	4			
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B08	SRX204523		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-01A-01D GS01104-CLS_B08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54358-FS3_L01.bam	SRR616935	@dbgap@:reads/SRP012002/SRS375435/SRX204523/SRR616935/SRR616935.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASUCB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUCB_NormalVsPrimary.png	4			
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUCB_NormalVsPrimary.png	4			
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUCB_NormalVsPrimary.png	4			
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUCB_NormalVsPrimary.png	4			
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUCB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUCB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C08	SRX204522		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUCB-10A-01D GS01104-CLS_C08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54357-FS3_L01.bam	SRR616942	@dbgap@:reads/SRP012002/SRS375434/SRX204522/SRR616942/SRR616942.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASUML_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUML_NormalVsPrimary.png	4			
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUML_NormalVsPrimary.png	4			
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUML_NormalVsPrimary.png	4			
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUML_NormalVsPrimary.png	4			
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-01A-01D	DNA	EFO	SRS489924	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G09	SRX363196		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-01A-01D GS01968-CLS_G09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62175-FS3_L03.bam	SRR1008745	@dbgap@:reads/SRP012002/SRS489924/SRX363196/SRR1008745/SRR1008745.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASUML_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUML_NormalVsPrimary.png	4			
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUML_NormalVsPrimary.png	4			
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUML_NormalVsPrimary.png	4			
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUML_NormalVsPrimary.png	4			
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUML_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUML_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASUML	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUML-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUML-10A-01D	DNA	EFO	SRS489923	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H09	SRX363195		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUML-10A-01D GS01968-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS63563-FS3_L01.bam	SRR1008753	@dbgap@:reads/SRP012002/SRS489923/SRX363195/SRR1008753/SRR1008753.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASUYG_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUYG_NormalVsPrimary.png	4			
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUYG_NormalVsPrimary.png	4			
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUYG_NormalVsPrimary.png	4			
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUYG_NormalVsPrimary.png	4			
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D08	SRX204113		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-01A-01D GS01104-CLS_D08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L01.bam	SRR616025	@dbgap@:reads/SRP012002/SRS375013/SRX204113/SRR616025/SRR616025.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASUYG_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUYG_NormalVsPrimary.png	4			
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUYG_NormalVsPrimary.png	4			
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUYG_NormalVsPrimary.png	4			
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASUYG_NormalVsPrimary.png	4			
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASUYG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASUYG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E08	SRX204112		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASUYG-10A-01D GS01104-CLS_E08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54431-FS3_L01.bam	SRR616032	@dbgap@:reads/SRP012002/SRS375012/SRX204112/SRR616032/SRR616032.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASVRU_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASVRU_NormalVsPrimary.png	4			
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASVRU_NormalVsPrimary.png	4			
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASVRU_NormalVsPrimary.png	4			
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASVRU_NormalVsPrimary.png	4			
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F08	SRX204525		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-01A-01D GS01104-CLS_F08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54429-FS3_L01.bam	SRR616949	@dbgap@:reads/SRP012002/SRS375437/SRX204525/SRR616949/SRR616949.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASVRU_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASVRU_NormalVsPrimary.png	4			
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASVRU_NormalVsPrimary.png	4			
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASVRU_NormalVsPrimary.png	4			
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASVRU_NormalVsPrimary.png	4			
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASVRU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASVRU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G08	SRX204524		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASVRU-10A-01D GS01104-CLS_G08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54430-FS3_L03.bam	SRR616956	@dbgap@:reads/SRP012002/SRS375436/SRX204524/SRR616956/SRR616956.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASWIJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWIJ_NormalVsPrimary.png	4			
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWIJ_NormalVsPrimary.png	4			
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWIJ_NormalVsPrimary.png	4			
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWIJ_NormalVsPrimary.png	4			
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_D11	SRX366268		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-01A-01D GS01969-CLS_D11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62260-FS3_L03.bam	SRR1014267	@dbgap@:reads/SRP012002/SRS380887/SRX366268/SRR1014267/SRR1014267.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASWIJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWIJ_NormalVsPrimary.png	4			
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWIJ_NormalVsPrimary.png	4			
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWIJ_NormalVsPrimary.png	4			
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWIJ_NormalVsPrimary.png	4			
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWIJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWIJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E11	SRX366267		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWIJ-10A-01D GS01969-CLS_E11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62364-FS3_L01.bam	SRR1014275	@dbgap@:reads/SRP012002/SRS380851/SRX366267/SRR1014275/SRR1014275.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASWVY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWVY_NormalVsPrimary.png	4			
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWVY_NormalVsPrimary.png	4			
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWVY_NormalVsPrimary.png	4			
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWVY_NormalVsPrimary.png	4			
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H08	SRX204519		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-01A-01D GS01104-CLS_H08 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55265-FS3_L01.bam	SRR616907	@dbgap@:reads/SRP012002/SRS375431/SRX204519/SRR616907/SRR616907.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASWVY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWVY_NormalVsPrimary.png	4			
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWVY_NormalVsPrimary.png	4			
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWVY_NormalVsPrimary.png	4			
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWVY_NormalVsPrimary.png	4			
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWVY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWVY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A09	SRX204518		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWVY-10A-01D GS01104-CLS_A09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55159-FS3_L01.bam	SRR616914	@dbgap@:reads/SRP012002/SRS375430/SRX204518/SRR616914/SRR616914.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASWYR_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWYR_NormalVsPrimary.png	4			
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWYR_NormalVsPrimary.png	4			
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWYR_NormalVsPrimary.png	4			
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWYR_NormalVsPrimary.png	4			
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F11	SRX366365		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-01A-01D GS01969-CLS_F11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62366-FS3_L01.bam	SRR1014736	@dbgap@:reads/SRP012002/SRS380841/SRX366365/SRR1014736/SRR1014736.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASWYR_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWYR_NormalVsPrimary.png	4			
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWYR_NormalVsPrimary.png	4			
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWYR_NormalVsPrimary.png	4			
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASWYR_NormalVsPrimary.png	4			
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASWYR_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASWYR_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G11	SRX366364		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASWYR-10A-01D GS01969-CLS_G11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62365-FS3_L01.bam	SRR1014743	@dbgap@:reads/SRP012002/SRS380853/SRX366364/SRR1014743/SRR1014743.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASXHE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXHE_NormalVsPrimary.png	4			
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXHE_NormalVsPrimary.png	4			
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXHE_NormalVsPrimary.png	4			
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXHE_NormalVsPrimary.png	4			
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B09	SRX204274		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-01A-01D GS01104-CLS_B09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55263-FS3_L01.bam	SRR616477	@dbgap@:reads/SRP012002/SRS375190/SRX204274/SRR616477/SRR616477.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASXHE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXHE_NormalVsPrimary.png	4			
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXHE_NormalVsPrimary.png	4			
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXHE_NormalVsPrimary.png	4			
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXHE_NormalVsPrimary.png	4			
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXHE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXHE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C09	SRX204273		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXHE-10A-01D GS01104-CLS_C09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55264-FS3_L01.bam	SRR616484	@dbgap@:reads/SRP012002/SRS375189/SRX204273/SRR616484/SRR616484.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASXIE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXIE_NormalVsPrimary.png	4			
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXIE_NormalVsPrimary.png	4			
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXIE_NormalVsPrimary.png	4			
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXIE_NormalVsPrimary.png	4			
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_D12	SRX363120		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-01A-01D GS01996-CLS_D12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64526-FS3_L01.bam	SRR1008156	@dbgap@:reads/SRP012002/SRS380877/SRX363120/SRR1008156/SRR1008156.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASXIE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXIE_NormalVsPrimary.png	4			
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXIE_NormalVsPrimary.png	4			
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXIE_NormalVsPrimary.png	4			
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXIE_NormalVsPrimary.png	4			
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXIE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXIE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_A05	SRX363119		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXIE-10A-01D GS01996-CLS_A05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64525-FS3_L01.bam	SRR1008163	@dbgap@:reads/SRP012002/SRS380889/SRX363119/SRR1008163/SRR1008163.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASXRG_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXRG_NormalVsPrimary.png	4			
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXRG_NormalVsPrimary.png	4			
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXRG_NormalVsPrimary.png	4			
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXRG_NormalVsPrimary.png	4			
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_E12	SRX363098		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-01A-01D GS01996-CLS_E12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64527-FS3_L01.bam	SRR1008009	@dbgap@:reads/SRP012002/SRS380839/SRX363098/SRR1008009/SRR1008009.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASXRG_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXRG_NormalVsPrimary.png	4			
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXRG_NormalVsPrimary.png	4			
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXRG_NormalVsPrimary.png	4			
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASXRG_NormalVsPrimary.png	4			
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASXRG_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASXRG_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_B05	SRX363097		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASXRG-10A-01D GS01996-CLS_B05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64422-FS3_L01.bam	SRR1008016	@dbgap@:reads/SRP012002/SRS380850/SRX363097/SRR1008016/SRR1008016.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASYLD_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYLD_NormalVsPrimary.png	4			
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYLD_NormalVsPrimary.png	4			
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYLD_NormalVsPrimary.png	4			
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYLD_NormalVsPrimary.png	4			
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F05	SRX367343		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-01A-01D GS01997-CLS_F05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L01.bam	SRR1016028	@dbgap@:reads/SRP012002/SRS380876/SRX367343/SRR1016028/SRR1016028.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASYLD_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYLD_NormalVsPrimary.png	4			
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYLD_NormalVsPrimary.png	4			
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYLD_NormalVsPrimary.png	4			
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYLD_NormalVsPrimary.png	4			
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYLD_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYLD_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G05	SRX367342		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYLD-10A-01D GS01997-CLS_G05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65822-FS3_L08.bam	SRR1016033	@dbgap@:reads/SRP012002/SRS380854/SRX367342/SRR1016033/SRR1016033.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASYPX_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYPX_NormalVsPrimary.png	4			
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYPX_NormalVsPrimary.png	4			
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYPX_NormalVsPrimary.png	4			
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYPX_NormalVsPrimary.png	4			
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_F06	SRX367220		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-01A-01D GS01997-CLS_F06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65944-FS3_L08.bam	SRR1015860	@dbgap@:reads/SRP012002/SRS380865/SRX367220/SRR1015860/SRR1015860.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASYPX_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYPX_NormalVsPrimary.png	4			
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYPX_NormalVsPrimary.png	4			
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYPX_NormalVsPrimary.png	4			
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASYPX_NormalVsPrimary.png	4			
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASYPX_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASYPX_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_G06	SRX367219		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASYPX-10A-01D GS01997-CLS_G06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65824-FS3_L01.bam	SRR1015864	@dbgap@:reads/SRP012002/SRS380874/SRX367219/SRR1015864/SRR1015864.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASZKE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASZKE_NormalVsPrimary.png	4			
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASZKE_NormalVsPrimary.png	4			
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASZKE_NormalVsPrimary.png	4			
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASZKE_NormalVsPrimary.png	4			
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-01A-01D	DNA	EFO	SRS489925	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A10	SRX363198		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-01A-01D GS01968-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62173-FS3_L01.bam	SRR1008776	@dbgap@:reads/SRP012002/SRS489925/SRX363198/SRR1008776/SRR1008776.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PASZKE_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASZKE_NormalVsPrimary.png	4			
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASZKE_NormalVsPrimary.png	4			
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASZKE_NormalVsPrimary.png	4			
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PASZKE_NormalVsPrimary.png	4			
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PASZKE_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PASZKE_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PASZKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZKE-10A-01D	DNA	EFO	SRS489926	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_B10	SRX363197		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PASZKE-10A-01D GS01968-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62174-FS3_L01.bam	SRR1008784	@dbgap@:reads/SRP012002/SRS489926/SRX363197/SRR1008784/SRR1008784.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATAYJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATAYJ_NormalVsPrimary.png	4			
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATAYJ_NormalVsPrimary.png	4			
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATAYJ_NormalVsPrimary.png	4			
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATAYJ_NormalVsPrimary.png	4			
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-01A-01D	DNA	EFO	SRS489830	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01996-CLS_G12	SRX363096		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-01A-01D GS01996-CLS_G12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64524-FS3_L01.bam	SRR1007994	@dbgap@:reads/SRP012002/SRS489830/SRX363096/SRR1007994/SRR1007994.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATAYJ_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATAYJ_NormalVsPrimary.png	4			
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATAYJ_NormalVsPrimary.png	4			
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATAYJ_NormalVsPrimary.png	4			
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATAYJ_NormalVsPrimary.png	4			
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATAYJ_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATAYJ_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATAYJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATAYJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATAYJ-10A-01D	DNA	EFO	SRS489829	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_E10	SRX363095		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATAYJ-10A-01D GS01968-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64954-FS3_L01.bam	SRR1008002	@dbgap@:reads/SRP012002/SRS489829/SRX363095/SRR1008002/SRR1008002.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATBMM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATBMM_NormalVsPrimary.png	4			
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATBMM_NormalVsPrimary.png	4			
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATBMM_NormalVsPrimary.png	4			
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATBMM_NormalVsPrimary.png	4			
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D09	SRX205107		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-01A-01D GS01104-CLS_D09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L01.bam	SRR618311	@dbgap@:reads/SRP012002/SRS376030/SRX205107/SRR618311/SRR618311.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATBMM_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATBMM_NormalVsPrimary.png	4			
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATBMM_NormalVsPrimary.png	4			
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATBMM_NormalVsPrimary.png	4			
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATBMM_NormalVsPrimary.png	4			
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATBMM_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATBMM_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E09	SRX205106		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATBMM-10A-01D GS01104-CLS_E09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55262-FS3_L01.bam	SRR618318	@dbgap@:reads/SRP012002/SRS376029/SRX205106/SRR618318/SRR618318.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATCFL_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATCFL_NormalVsPrimary.png	4			
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATCFL_NormalVsPrimary.png	4			
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATCFL_NormalVsPrimary.png	4			
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATCFL_NormalVsPrimary.png	4			
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_H11	SRX367212		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-01A-01D GS01969-CLS_H11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L03.bam	SRR1015822	@dbgap@:reads/SRP012002/SRS380866/SRX367212/SRR1015822/SRR1015822.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATCFL_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATCFL_NormalVsPrimary.png	4			
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATCFL_NormalVsPrimary.png	4			
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATCFL_NormalVsPrimary.png	4			
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATCFL_NormalVsPrimary.png	4			
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATCFL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATCFL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_A12	SRX367211		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATCFL-10A-01D GS01969-CLS_A12 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62367-FS3_L01.bam	SRR1015829	@dbgap@:reads/SRP012002/SRS380858/SRX367211/SRR1015829/SRR1015829.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATDXC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATDXC_NormalVsPrimary.png	4			
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATDXC_NormalVsPrimary.png	4			
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATDXC_NormalVsPrimary.png	4			
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATDXC_NormalVsPrimary.png	4			
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H05	SRX367289		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-01A-01D GS01997-CLS_H05 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64629-FS3_L01.bam	SRR1015960	@dbgap@:reads/SRP012002/SRS380840/SRX367289/SRR1015960/SRR1015960.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATDXC_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATDXC_NormalVsPrimary.png	4			
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATDXC_NormalVsPrimary.png	4			
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATDXC_NormalVsPrimary.png	4			
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATDXC_NormalVsPrimary.png	4			
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATDXC_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATDXC_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A06	SRX367288		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATDXC-10A-01D GS01997-CLS_A06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65937-FS3_L01.bam	SRR1015965	@dbgap@:reads/SRP012002/SRS380836/SRX367288/SRR1015965/SRR1015965.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATEPF_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATEPF_NormalVsPrimary.png	4			
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATEPF_NormalVsPrimary.png	4			
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATEPF_NormalVsPrimary.png	4			
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATEPF_NormalVsPrimary.png	4			
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F09	SRX205065		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-01A-01D GS01104-CLS_F09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54548-FS3_L01.bam	SRR618259	@dbgap@:reads/SRP012002/SRS375987/SRX205065/SRR618259/SRR618259.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATEPF_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATEPF_NormalVsPrimary.png	4			
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATEPF_NormalVsPrimary.png	4			
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATEPF_NormalVsPrimary.png	4			
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATEPF_NormalVsPrimary.png	4			
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATEPF_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATEPF_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H09	SRX205064		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATEPF-10A-01D GS01104-CLS_H09 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54550-FS3_L03.bam	SRR618266	@dbgap@:reads/SRP012002/SRS375986/SRX205064/SRR618266/SRR618266.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATESI_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATESI_NormalVsPrimary.png	4			
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATESI_NormalVsPrimary.png	4			
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATESI_NormalVsPrimary.png	4			
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATESI_NormalVsPrimary.png	4			
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A10	SRX204983		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-01A-01D GS01104-CLS_A10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55160-FS3_L01.bam	SRR618024	@dbgap@:reads/SRP012002/SRS375909/SRX204983/SRR618024/SRR618024.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATESI_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATESI_NormalVsPrimary.png	4			
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATESI_NormalVsPrimary.png	4			
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATESI_NormalVsPrimary.png	4			
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATESI_NormalVsPrimary.png	4			
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATESI_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATESI_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B10	SRX204982		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATESI-10A-01D GS01104-CLS_B10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54588-FS3_L01.bam	SRR618031	@dbgap@:reads/SRP012002/SRS375908/SRX204982/SRR618031/SRR618031.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATFCY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFCY_NormalVsPrimary.png	4			
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFCY_NormalVsPrimary.png	4			
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFCY_NormalVsPrimary.png	4			
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFCY_NormalVsPrimary.png	4			
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_C10	SRX205061		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-01A-01D GS01104-CLS_C10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54584-FS3_L01.bam	SRR618230	@dbgap@:reads/SRP012002/SRS375985/SRX205061/SRR618230/SRR618230.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATFCY_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFCY_NormalVsPrimary.png	4			
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFCY_NormalVsPrimary.png	4			
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFCY_NormalVsPrimary.png	4			
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFCY_NormalVsPrimary.png	4			
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFCY_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFCY_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_D10	SRX205060		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFCY-10A-01D GS01104-CLS_D10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54586-FS3_L01.bam	SRR618237	@dbgap@:reads/SRP012002/SRS375984/SRX205060/SRR618237/SRR618237.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATFXV_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFXV_NormalVsPrimary.png	4			
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFXV_NormalVsPrimary.png	4			
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFXV_NormalVsPrimary.png	4			
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFXV_NormalVsPrimary.png	4			
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_E10	SRX205059		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-01A-01D GS01104-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L01.bam	SRR618217	@dbgap@:reads/SRP012002/SRS375983/SRX205059/SRR618217/SRR618217.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATFXV_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFXV_NormalVsPrimary.png	4			
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFXV_NormalVsPrimary.png	4			
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFXV_NormalVsPrimary.png	4			
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATFXV_NormalVsPrimary.png	4			
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATFXV_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATFXV_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_F10	SRX205058		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATFXV-10A-01D GS01104-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54927-FS3_L01.bam	SRR618223	@dbgap@:reads/SRP012002/SRS375982/SRX205058/SRR618223/SRR618223.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATGJU_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGJU_NormalVsPrimary.png	4			
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGJU_NormalVsPrimary.png	4			
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGJU_NormalVsPrimary.png	4			
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGJU_NormalVsPrimary.png	4			
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-01A-01D	DNA	EFO	SRS489928	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_F10	SRX363200		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-01A-01D GS01968-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62171-FS3_L01.bam	SRR1008808	@dbgap@:reads/SRP012002/SRS489928/SRX363200/SRR1008808/SRR1008808.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATGJU_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGJU_NormalVsPrimary.png	4			
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGJU_NormalVsPrimary.png	4			
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGJU_NormalVsPrimary.png	4			
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGJU_NormalVsPrimary.png	4			
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGJU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGJU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATGJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGJU-10A-01D	DNA	EFO	SRS489927	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_G10	SRX363199		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGJU-10A-01D GS01968-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62172-FS3_L01.bam	SRR1008816	@dbgap@:reads/SRP012002/SRS489927/SRX363199/SRR1008816/SRR1008816.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATGLU_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGLU_NormalVsPrimary.png	4			
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGLU_NormalVsPrimary.png	4			
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGLU_NormalVsPrimary.png	4			
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGLU_NormalVsPrimary.png	4			
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_G10	SRX205043		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-01A-01D GS01104-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54925-FS3_L01.bam	SRR618161	@dbgap@:reads/SRP012002/SRS375965/SRX205043/SRR618161/SRR618161.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATGLU_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGLU_NormalVsPrimary.png	4			
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGLU_NormalVsPrimary.png	4			
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGLU_NormalVsPrimary.png	4			
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGLU_NormalVsPrimary.png	4			
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGLU_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGLU_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_H10	SRX205042		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGLU-10A-01D GS01104-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54926-FS3_L03.bam	SRR618168	@dbgap@:reads/SRP012002/SRS375964/SRX205042/SRR618168/SRR618168.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATGWT_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGWT_NormalVsPrimary.png	4			
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGWT_NormalVsPrimary.png	4			
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGWT_NormalVsPrimary.png	4			
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGWT_NormalVsPrimary.png	4			
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B06	SRX367261		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-01A-01D GS01997-CLS_B06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L01.bam	SRR1015907	@dbgap@:reads/SRP012002/SRS380862/SRX367261/SRR1015907/SRR1015907.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATGWT_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGWT_NormalVsPrimary.png	4			
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGWT_NormalVsPrimary.png	4			
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGWT_NormalVsPrimary.png	4			
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATGWT_NormalVsPrimary.png	4			
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATGWT_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATGWT_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C06	SRX367260		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATGWT-10A-01D GS01997-CLS_C06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L01.bam	SRR1015911	@dbgap@:reads/SRP012002/SRS380869/SRX367260/SRR1015911/SRR1015911.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATHKB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHKB_NormalVsPrimary.png	4			
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHKB_NormalVsPrimary.png	4			
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHKB_NormalVsPrimary.png	4			
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHKB_NormalVsPrimary.png	4			
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-01A-01D	DNA	EFO	SRS489647	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_H10	SRX362890		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-01A-01D GS01968-CLS_H10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62266-FS3_L01.bam	SRR1006493	@dbgap@:reads/SRP012002/SRS489647/SRX362890/SRR1006493/SRR1006493.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATHKB_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHKB_NormalVsPrimary.png	4			
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHKB_NormalVsPrimary.png	4			
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHKB_NormalVsPrimary.png	4			
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHKB_NormalVsPrimary.png	4			
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHKB_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHKB_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATHKB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHKB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHKB-10A-01D	DNA	EFO	SRS489646	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01968-CLS_A11	SRX362889		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHKB-10A-01D GS01968-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62170-FS3_L01.bam	SRR1006500	@dbgap@:reads/SRP012002/SRS489646/SRX362889/SRR1006500/SRR1006500.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATHVK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHVK_NormalVsPrimary.png	4			
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHVK_NormalVsPrimary.png	4			
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHVK_NormalVsPrimary.png	4			
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHVK_NormalVsPrimary.png	4			
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_A11	SRX205045		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-01A-01D GS01104-CLS_A11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS55504-FS3_L01.bam	SRR618175	@dbgap@:reads/SRP012002/SRS375967/SRX205045/SRR618175/SRR618175.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATHVK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHVK_NormalVsPrimary.png	4			
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHVK_NormalVsPrimary.png	4			
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHVK_NormalVsPrimary.png	4			
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATHVK_NormalVsPrimary.png	4			
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATHVK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATHVK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 library	PAIRED	GENOMIC	WGS	RANDOM	GS01104-CLS_B11	SRX205044		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATHVK-10A-01D GS01104-CLS_B11 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS54924-FS3_L01.bam	SRR618182	@dbgap@:reads/SRP012002/SRS375966/SRX205044/SRR618182/SRR618182.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATNKP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsPrimary.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsPrimary.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsPrimary.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsPrimary.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-01A-01D	DNA	EFO	SRS494297	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_H06	SRX368256		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-01A-01D GS01997-CLS_H06 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64878-FS3_L08.bam	SRR1017482	@dbgap@:reads/SRP012002/SRS494297/SRX368256/SRR1017482/SRR1017482.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATNKP_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsRecurrent.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsRecurrent.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsRecurrent.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsRecurrent.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-02A-01D	DNA	EFO	SRS494298	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_A07	SRX368257		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-02A-01D GS01997-CLS_A07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS64877-FS3_L01.bam	SRR1017477	@dbgap@:reads/SRP012002/SRS494298/SRX368257/SRR1017477/SRR1017477.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATNKP_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsPrimary.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATNKP_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsRecurrent.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsPrimary.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsRecurrent.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsPrimary.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsRecurrent.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsPrimary.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATNKP_NormalVsRecurrent.png	4			
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATNKP_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATNKP_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATNKP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATNKP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATNKP-10A-01D	DNA	EFO	SRS494296	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_B07	SRX368255		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATNKP-10A-01D GS01997-CLS_B07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65939-FS3_L08.bam	SRR1017486	@dbgap@:reads/SRP012002/SRS494296/SRX368255/SRR1017486/SRR1017486.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATYIL_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsPrimary.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsPrimary.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsPrimary.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsPrimary.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-01A-01D	DNA	EFO	SRS489762	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_E10	SRX363026		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-01A-01D GS01969-CLS_E10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62511-FS3_L01.bam	SRR1007498	@dbgap@:reads/SRP012002/SRS489762/SRX363026/SRR1007498/SRR1007498.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATYIL_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsRecurrent.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsRecurrent.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsRecurrent.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsRecurrent.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-02A-01D	DNA	EFO	SRS489761	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_F10	SRX363025		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-02A-01D GS01969-CLS_F10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62510-FS3_L01.bam	SRR1007505	@dbgap@:reads/SRP012002/SRS489761/SRX363025/SRR1007505/SRR1007505.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATYIL_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsPrimary.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PATYIL_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsRecurrent.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsPrimary.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsRecurrent.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsPrimary.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsRecurrent.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsPrimary.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PATYIL_NormalVsRecurrent.png	4			
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PATYIL_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PATYIL_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PATYIL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATYIL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATYIL-10A-01D	DNA	EFO	SRS489760	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 library	PAIRED	GENOMIC	WGS	RANDOM	GS01969-CLS_G10	SRX363024		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PATYIL-10A-01D GS01969-CLS_G10 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS62262-FS3_L01.bam	SRR1007512	@dbgap@:reads/SRP012002/SRS489760/SRX363024/SRR1007512/SRR1007512.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAUDDK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsPrimary.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsPrimary.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsPrimary.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsPrimary.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-01A-01D	DNA	EFO	SRS494293	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_C07	SRX368252		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-01A-01D GS01997-CLS_C07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS65877-FS3_L08.bam	SRR1017233	@dbgap@:reads/SRP012002/SRS494293/SRX368252/SRR1017233/SRR1017233.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAUDDK_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsRecurrent.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsRecurrent.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsRecurrent.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsRecurrent.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-02A	organism part	EFO	Solid Tumor	NCIt	"Recurrent Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-02A-01D	DNA	EFO	SRS494294	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_D07	SRX368253		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-02A-01D GS01997-CLS_D07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61486-FS3_L01.bam	SRR1017226	@dbgap@:reads/SRP012002/SRS494294/SRX368253/SRR1017226/SRR1017226.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAUDDK_NormalVsPrimary.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsPrimary.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-CnvSegment-CGI:01	somaticCnvSegmentsDiploidBeta_TARGET-30-PAUDDK_NormalVsRecurrent.tsv	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsRecurrent.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsPrimary.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_4S_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsRecurrent.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsPrimary.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-Junction-CGI:01	ConcatenatedJunctionFileFinal_NBL_May_14_2014.txt	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsRecurrent.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsPrimary.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsPrimary.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsPrimary.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Circos-CGI:01	somaticCircos_TARGET-30-PAUDDK_NormalVsRecurrent.png	4			
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-FilterSomatic-CGI:01	somaticFilteredMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	all_verified_variants_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_details_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_4S_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	sqhigh_and_verified_variants_in_genes_somatic_non_silent_summary_with_filters_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	total_variant_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_non_silent_details_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_somatic_and_loh_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	completegenomics.com:Protocol:WGS-VariantCall-CGI:01	fullVcf_TARGET-30-PAUDDK_NormalVsRecurrent.vcf.bz2	3	completegenomics.com:Protocol:WGS-Vcf2Maf-CGI:01	fullMaf_TARGET-30-PAUDDK_NormalVsRecurrent.maf.txt	3	completegenomics.com:Protocol:WGS-HigherLevelSummary-CGI:01	variants_in_genes_summary_NBL_May_14_2014.tsv	3
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-CnvSegment-CONCERTING-CGI:01	TARGET_NBL_WGS_CNVLOH.tsv	3						
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-StructVariant-CGI:01	TARGET_NBL_WGS_SV.tsv	3						
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Diagnosis_20160615.maf.txt	3						
TARGET-30-PAUDDK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAUDDK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAUDDK-10A-01D	DNA	EFO	SRS494292	completegenomics.com:Protocol:WGS-LibraryPrep-CGI:01	Complete Genomics Inc.	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 library	PAIRED	GENOMIC	WGS	RANDOM	GS01997-CLS_E07	SRX368251		completegenomics.com:Protocol:WGS-Sequence-CGI-CGI:01	CGI	TARGET-30-PAUDDK-10A-01D GS01997-CLS_E07 run	sequencing assay	EFO	70	completegenomics.com:Protocol:WGS-BaseCall-CGI:01		completegenomics.com:Protocol:WGS-ReadAlign-CGI:01		GS61487-FS3_L01.bam	SRR1017238	@dbgap@:reads/SRP012002/SRS494292/SRX368251/SRR1017238/SRR1017238.sra	2	GRCh37-lite	stjude.org:Protocol:WGS-VariantCall-CGI:01	TARGET_NBL_WGS_Relapse_20160615.maf.txt	3						
