Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	1	3218610	152640201	68891	0.0097
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	1	152640949	153079521	287	-0.3607
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	1	153083967	247813706	59830	0.0141
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	2	484222	242476062	131169	0.0133
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	3	2212571	197538677	106279	0.0169
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	4	1053934	116027395	63769	0.016
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	4	116030398	127963902	6613	-0.3277
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	4	127964023	127965000	3	-1.6528
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	4	127965291	131939505	2034	-0.3275
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	4	132364172	188763651	30183	0.0252
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	5	914233	84503621	45258	0.0162
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	5	84505930	85421790	417	-0.3145
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	5	85424077	85444763	22	0.0754
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	5	85444868	85497989	42	-0.1202
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	5	85498287	85683171	106	0.0924
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	5	85684660	97973326	6338	-0.3352
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	5	97979103	100880212	827	-0.8232
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	5	100881895	105908231	2386	-0.3388
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	5	105911008	180360469	45006	0.0189
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	6	1014281	84878699	46236	0.0171
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	6	84887231	114488790	16980	-0.2812
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	6	114489321	114489801	2	-2.007
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	6	114490281	122395469	3982	-0.2697
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	6	122395557	170903919	29181	0.0172
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	705284	42363805	24321	0.0158
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	42364586	42392720	20	-0.4899
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	42399523	48440863	3469	0.012
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	48441019	49779618	929	-0.3474
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	49779872	51719272	1364	0.0069
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	51719529	52654722	736	-0.3411
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	52658240	53091860	307	0.0202
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	53093901	53118434	21	-0.4981
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	53119005	53604469	238	-0.0139
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	53604871	55014732	905	-0.3372
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	55015347	55957687	716	0.0062
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	55957859	56118306	42	-0.3659
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	7	56122134	158385118	48169	0.0153
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	8	617667	82793068	44941	0.0156
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	8	82795723	85352000	1321	-0.3224
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	8	85352120	106452095	11937	0.0183
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	8	106452111	106534158	50	-0.2998
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	8	106538051	145232496	23203	0.0182
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	9	789932	140938752	67956	0.0138
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	10	415240	135225087	80783	0.0126
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	11	456120	28841531	18114	0.0143
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	11	28841965	38219720	5745	-0.3355
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	11	38224816	40294245	1247	0.0121
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	11	40301193	40319268	17	-0.3845
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	11	40320979	40570528	160	0.0378
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	11	40570607	41953768	984	-0.3137
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	11	41955190	134142530	50906	0.0144
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	12	889902	87491417	47399	0.017
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	12	87503269	88394003	472	-0.2661
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	12	88398546	133161346	25986	0.0101
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	13	19450806	41202384	13871	0.0015
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	13	41203628	41204015	2	-0.8857
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	13	41204284	114987458	42701	-0.0235
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	14	20501368	37910525	9543	0.015
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	14	37916743	38079424	75	0.2783
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	14	38080088	105988038	39769	0.0144
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	15	23687685	101884307	44488	0.0089
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	16	653459	89379936	40761	0.0066
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	17	987221	80917016	36968	0.0061
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	18	329586	77109240	42606	0.0143
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	19	284018	58878226	23935	5e-04
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	20	455764	62219837	37251	0.0051
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	21	15347621	47678774	20565	0.014
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	22	17423930	49331012	16915	0
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	3157107	93124111	35278	-0.0049
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	93128730	93128975	2	4.3331
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	93134512	113593844	9326	-0.0035
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	113594520	113603918	3	-3.3325
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	113604384	122517626	4116	5e-04
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	122519222	122522060	2	3.5094
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	122525709	138564963	7347	0.0012
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	138565455	138580558	6	1.8323
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	138580574	144813219	2662	-2e-04
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	144813727	144813860	2	-4.4825
CLADE_p_TCGASNP_184_195_N_GenomeWideSNP_6_E07_1039792	X	144816019	154905589	4178	-0.0186
