Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	1	3218610	46020716	22628	-5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	1	46021556	46021630	2	-2.2322
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	1	46026737	239910972	101610	-3e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	1	239917246	239922134	2	-2.8112
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	1	239924870	240500852	514	0.0071
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	1	240501211	240507611	3	-1.5611
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	1	240507636	247813706	3998	0.0015
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	2	484222	123784406	64658	0.0037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	2	123786140	123786895	2	-2.3456
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	2	123790550	242476062	66275	0.0029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	3	2212571	197538677	106118	0.0034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	4	1053934	117650660	64547	8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	4	117651238	117653364	2	-2.5034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	4	117655243	188763651	37977	3e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	914233	4662521	2393	0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	4664457	4664870	3	1.6272
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	4665178	16049300	7490	-0.0033
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	16049924	16058289	4	-2.1743
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	16058327	91607242	38910	0.0029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	91614709	91618146	3	-2.1908
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	91619156	112222721	10519	0.0028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	112226661	112227799	2	-2.4435
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	112229714	113492963	829	4e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	113500551	113596603	68	-1.0194
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	113599046	168267907	33158	0.0034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	168268371	168268387	2	-2.6136
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	5	168270244	180360469	6914	-0.0073
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	6	1014281	129757350	71425	2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	6	129758301	129764212	3	-2.2666
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	6	129764365	160961075	19924	-1e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	6	160962503	160962626	2	-2.4785
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	6	160964652	170903919	4918	-0.0017
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	7	705284	14607627	6721	-0.0083
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	7	14618505	14618830	2	-1.9935
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	7	14619026	16310373	1127	-0.0098
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	7	16310506	16312803	3	-1.7774
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	7	16313488	41875919	16055	0.0029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	7	41876963	41877911	2	-2.2671
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	7	41878017	105889261	29590	0.0045
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	7	105889906	105890298	2	-2.6704
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	7	105900235	158385118	27644	0.0053
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	8	617667	17706032	8833	0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	8	17708154	17708904	2	-1.8653
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	8	17710552	66358164	26584	0.0034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	8	66360099	66360153	2	-2.9369
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	8	66362156	145232496	45933	0.0037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	9	789932	121888922	57318	0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	9	121892639	121892925	2	-2.2612
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	9	121893512	140938752	10497	-0.0087
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	10	415240	100276039	58605	0.0053
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	10	100278057	100278092	2	-2.9952
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	10	100279852	100686138	305	0.0094
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	10	100690052	100690432	2	-2.206
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	10	100709181	135225087	21756	0.0059
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	11	456120	134142530	77005	7e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	12	889902	133161346	73692	0.0028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	13	19450806	81802641	35974	0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	13	81805686	81815865	3	-1.6581
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	13	81816010	114987458	20511	-2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	14	20501368	105988038	49276	-0.0028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	15	23687685	101884307	44394	0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	16	653459	89379936	40689	2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	17	987221	13714612	7121	-8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	17	13719278	13719430	2	-2.0037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	17	13720784	49651084	12966	0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	17	49657831	49658110	2	-1.941
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	17	49662910	80917016	16772	-2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	18	329586	68598272	38559	0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	18	68601345	68601652	3	-1.5332
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	18	68602782	77109240	3982	0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	19	284018	58878226	23867	-0.0092
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	20	455764	62219837	37185	0.0067
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	21	15347621	31638959	10425	0.0086
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	21	31640228	31643037	6	-1.1832
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	21	31650579	35513784	2393	-0.0084
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	21	35514672	35517783	2	-1.7485
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	21	35525015	47678774	7701	0.0015
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	22	17423930	49331012	16883	-0.0064
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	X	3157107	24688832	9111	0.029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	X	24691672	24691968	2	-5.2289
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	X	24692397	77748728	19973	0.0131
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	X	77749061	77750357	2	-5.2925
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	X	77752695	93413609	6559	0.0108
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	X	93413622	93417639	6	-2.7967
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	X	93417736	110257801	7479	0.0108
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	X	110257972	110262103	2	-4.5324
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B04_1359080	X	110262645	154905589	20167	0.021
