Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	1	3208470	245880329	128697	0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	2	474222	242124735	130940	0.0092
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	3	526235	199023074	106114	0.0022
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	4	1043934	189836143	102519	6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	5	967233	157228683	86305	0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	5	157228760	157229564	2	-2.1902
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	5	157231230	180293075	13994	0.0068
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	6	959281	170745844	96254	0.0013
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	7	671810	96784317	49310	0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	7	96784426	96784559	2	-3.1934
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	7	96784635	158077879	31838	0.0045
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	8	607667	1847344	597	-0.0077
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	8	1847582	1847607	2	-1.9606
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	8	1849752	9253994	3137	-0.0029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	8	9254334	9254396	2	-2.6346
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	8	9254605	145304484	77605	0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	779932	87627823	35383	0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	87631649	87635526	3	-2.7509
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	87635907	116477407	18699	-1e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	116477588	116478160	2	-1.9804
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	116478497	135754656	12257	0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	135755669	135757315	4	-1.8145
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	135778360	140058573	1467	0.0099
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	405240	66068684	38112	0.004
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	66069415	66069875	2	-2.3312
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	66072837	128574987	39183	0.0085
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	128577388	128581127	2	-2.1875
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	128582011	130893610	1833	-0.0041
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	130893732	130900761	3	-1.6626
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	130900762	135075077	1537	0.0096
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	446120	1346492	257	-0.0353
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	1346711	1351506	2	-1.9066
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	1351897	19504040	11611	0.002
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	19506510	19510993	2	-1.8776
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	19511082	42821013	14923	0.0053
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	42821793	42822554	2	-2.0264
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	42824619	48239868	3132	0.0063
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	48242000	48322023	39	-1.1484
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	48331067	133647740	47055	0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	12	760163	131671419	73697	0.0046
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	13	18348806	114005560	56493	0.0028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	14	19571208	64218952	24585	0.0051
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	14	64219202	64220673	2	-2.0088
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	14	64220826	105059083	24707	0.0015
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	15	21238778	99701830	44394	0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	16	593460	57398385	21876	0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	16	57399752	57400605	3	-1.718
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	16	57404352	87907437	18874	0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	17	933971	78247022	36731	0.0058
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	17	78247394	78247520	4	-1.6198
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	17	78248089	78510305	136	0.001
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	18	319586	9705004	5238	0.009
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	18	9708881	9710421	2	-2.3341
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	18	9710737	25063621	7779	0.0022
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	18	25068197	25069596	2	-1.8563
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	18	25072691	75210228	29527	0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	19	235018	8688586	2593	-5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	19	8688590	8688593	3	-1.8398
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	19	8690715	63570038	21273	8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	20	403764	61690281	37182	0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	21	14269492	46503202	20529	-8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	22	15803930	47717016	16886	0.0048
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	X	3167107	99076317	38069	0.0118
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	X	99076839	99077707	2	-4.6625
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	X	99082600	145131639	21382	0.0052
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	X	145131852	145132112	2	-5.2521
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	X	145132127	154558783	3896	0.0268
