Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	1	3218610	247813706	128753	0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	2	484222	242476062	130932	0.0092
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	3	2212571	197538677	106107	0.0022
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	4	1053934	188763651	102524	6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	5	914233	157296105	86302	0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	5	157296182	157296986	2	-2.1902
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	5	157298652	180360469	13997	0.0067
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	6	1014281	170903919	96263	0.0013
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	7	705284	96946381	49310	0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	7	96946490	96946623	2	-3.1934
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	7	96946699	158385118	31839	0.0045
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	8	617667	1859937	598	-0.0081
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	8	1860175	1860200	2	-1.9606
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	8	1862345	9216584	3137	-0.0029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	8	9216924	9216986	2	-2.6346
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	8	9217195	145232496	77611	0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	789932	88438003	35390	0.0013
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	88441829	88445706	3	-2.7509
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	88446087	117437586	18703	-1e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	117437767	117438339	2	-1.9804
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	117438676	136764835	12258	0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	136765848	136767494	4	-1.8145
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	9	136788539	140938752	1467	0.0099
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	415240	66398678	38113	0.004
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	66399409	66399869	2	-2.3312
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	66402831	128584997	39180	0.0085
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	128587398	128591137	2	-2.1875
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	128592021	131003620	1833	-0.0041
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	131003742	131010771	3	-1.6626
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	10	131010772	135225087	1537	0.0096
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	456120	1389916	256	-0.037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	1390135	1394930	2	-1.9066
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	1395321	19547464	11611	0.002
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	19549934	19554417	2	-1.8776
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	19554506	42864437	14920	0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	42865217	42865978	2	-2.0264
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	42868043	48283292	3132	0.0063
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	48285424	48365447	39	-1.1484
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	11	48374491	134142530	47049	0.0043
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	12	889902	133161346	73692	0.0046
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	13	19450806	114987458	56489	0.0028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	14	20501368	65149199	24583	0.0051
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	14	65149449	65150920	2	-2.0088
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	14	65151073	105988038	24707	0.0015
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	15	23687685	101884307	44392	0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	16	653459	58840884	21876	0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	16	58842251	58843104	3	-1.718
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	16	58846851	89379936	18808	0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	17	987221	80653733	36731	0.0057
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	17	80654105	80654231	4	-1.6198
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	17	80654800	80917016	136	0.001
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	18	329586	9715004	5240	0.0089
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	18	9718881	9720421	2	-2.3341
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	18	9720737	26809623	7777	0.0022
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	18	26814199	26815598	2	-1.8563
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	18	26818693	77109240	29524	0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	19	284018	8827586	2593	-5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	19	8827590	8827593	3	-1.8398
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	19	8829715	58878226	21273	8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	20	455764	62219837	37185	0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	21	15347621	47678774	20528	-8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	22	17423930	49331012	16885	0.0048
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	X	3157107	99189661	38082	0.0115
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	X	99190183	99191051	2	-4.6625
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	X	99195944	145323947	21388	0.0054
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	X	145324160	145324420	2	-5.2521
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_C03_1359056	X	145324435	154905589	3895	0.0269
