Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	1	3218610	247813706	128752	0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	2	484222	242476062	130924	0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	3	2212571	197538677	106135	0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	4	1053934	188763651	102525	0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	5	914233	180360469	100313	0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	6	1014281	170903919	96283	0.0037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	7	705284	158385118	81154	0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	8	617667	145232496	81350	0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	9	789932	4120725	2346	0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	9	4121848	4122322	2	-2.0456
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	9	4123868	35979519	19062	0.0017
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	9	35982865	35988450	11	-0.9104
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	9	35992697	140938752	46408	-1e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	10	415240	135225087	80669	0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	11	456120	81363128	43249	0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	11	81363567	81364087	3	-2.0374
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	11	81369043	134142530	33781	0.002
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	12	889902	133161346	73701	0.0078
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	13	19450806	114987458	56496	0.0043
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	14	20501368	105988038	49298	-9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	15	23687685	101884307	44405	-0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	16	653459	89379936	40697	-0.0016
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	17	987221	3207419	911	-0.0013
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	17	3208350	3208419	2	-2.1862
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	17	3208742	80917016	35965	-0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	18	329586	77109240	42547	0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	19	284018	58878226	23875	-2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	20	455764	62219837	37198	7e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	21	15347621	18541895	1941	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	21	18545792	18546059	2	-2.2603
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	21	18547842	47678774	18585	-4e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	22	17423930	49331012	16890	6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	X	3157107	9886194	1744	0.0426
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	X	9888179	9888242	2	2.8868
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	X	9888383	18029126	4272	0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	X	18029628	18030355	2	-4
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	X	18031845	63673614	18199	0.0121
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	X	63676919	63681059	3	-3.4644
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_E06_1359032	X	63687339	154905589	39237	0.0069
