Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	1	3208470	245880329	128693	6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	2	474222	59507859	34531	0.0064
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	2	59508696	59508885	2	-2.2262
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	2	59509030	242124735	96409	0.0071
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	3	526235	58607338	32638	0.0013
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	3	58608301	58608365	2	-1.7411
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	3	58609591	89588548	17878	0.0032
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	3	89588760	89591190	2	-2.0803
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	3	89601022	199023074	55603	0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	4	1043934	61009907	33466	0.0018
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	4	61012589	61014212	2	2.8956
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	4	61018159	169485345	59039	-2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	4	169489751	169489878	2	-3.3179
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	4	169490985	189836143	10014	0.0043
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	5	967233	180293075	100296	0.0011
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	6	959281	170745844	96262	0.001
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	7	671810	131656857	67189	0.0028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	7	131657919	131660498	11	-1.0583
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	7	131661314	158077879	13948	0.0053
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	8	607667	145304484	81350	0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	9	779932	74261611	26200	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	9	74266271	74266277	2	-2.3798
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	9	74267550	140058573	41617	7e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	10	405240	66080082	38117	0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	10	66082925	66083068	2	-2.3105
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	10	66083649	89622502	13969	0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	10	89631278	89631280	3	1.8987
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	10	89631281	135075077	28581	8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	11	446120	133647740	77031	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	12	760163	99321502	55633	0.0011
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	12	99326392	99326986	2	-2.0483
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	12	99327399	130441767	17655	0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	12	130441936	130447231	2	1.7038
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	12	130452024	131671419	401	0.0086
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	13	18348806	114005560	56493	-6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	14	19571208	105059083	49300	0.0038
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	15	21238778	99701830	44397	0
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	16	593460	87907437	40760	-0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	17	933971	78510305	36874	2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	18	319586	59814297	35014	0.0048
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	18	59814964	59839272	17	-0.6135
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	18	59840194	75210228	7514	0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	19	235018	63570038	23868	-0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	20	403764	61690281	37175	0.0038
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	21	14269492	46503202	20533	7e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	22	15803930	30688552	6050	0.0034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	22	30689003	30690162	2	-1.7106
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	22	30690202	47717016	10837	-0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	X	3167107	26086798	9834	0.0113
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	X	26087278	26088115	3	-3.1278
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	X	26088489	154558783	53626	0.0068
