Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	1	3218610	247813706	128749	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	2	484222	59654355	34527	0.0064
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	2	59655192	59655381	2	-2.2262
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	2	59655526	242476062	96405	0.0071
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	3	2212571	58632298	32638	0.0013
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	3	58633261	58633325	2	-1.7411
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	3	58634551	89505858	17873	0.0033
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	3	89506070	89508500	2	-2.0803
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	3	89518332	197538677	55601	0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	4	1053934	61327312	33464	0.0018
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	4	61329994	61331617	2	2.8956
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	4	61335564	169248770	59047	-2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	4	169253176	169253303	2	-3.3179
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	4	169254410	188763651	10013	0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	5	914233	180360469	100296	0.0011
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	6	1014281	170903919	96271	0.001
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	7	705284	132006317	67191	0.0028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	7	132007379	132009958	11	-1.0583
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	7	132010774	158385118	13946	0.0053
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	8	617667	145232496	81357	0.0013
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	9	789932	75071791	26206	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	9	75076451	75076457	2	-2.3798
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	9	75077730	140938752	41623	7e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	10	415240	66410076	38118	0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	10	66412919	66413062	2	-2.3105
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	10	66413643	89632522	13968	0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	10	89641298	89641300	3	1.8987
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	10	89641301	135225087	28579	8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	11	456120	134142530	77021	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	12	889902	100797371	55631	0.0011
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	12	100802261	100802855	2	-2.0483
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	12	100803268	131875814	17654	0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	12	131875983	131881278	2	1.7038
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	12	131886071	133161346	401	0.0086
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	13	19450806	114987458	56489	-6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	14	20501368	105988038	49298	0.0038
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	15	23687685	101884307	44395	0
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	16	653459	89379936	40694	-0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	17	987221	80917016	36874	3e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	18	329586	61663317	35013	0.0048
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	18	61663984	61688292	17	-0.6135
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	18	61689214	77109240	7512	0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	19	284018	58878226	23868	-0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	20	455764	62219837	37178	0.0037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	21	15347621	47678774	20532	7e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	22	17423930	32358552	6049	0.0034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	22	32359003	32360162	2	-1.7106
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	22	32360202	49331012	10837	-0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	X	3157107	26176877	9835	0.0113
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	X	26177357	26178194	3	-3.1278
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F03_1359060	X	26178568	154905589	53642	0.0068
