Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	1	3208470	245880329	128698	0.0058
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	2	474222	30018509	18188	0.0096
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	2	30018641	30018799	2	-2.2371
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	2	30018946	242124735	112755	-0.0032
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	3	526235	199023074	106131	0.0111
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	4	1043934	114786964	62854	0.0105
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	4	114791286	114794701	2	-1.4831
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	4	114798695	114838837	22	-0.1162
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	4	114839298	114839372	2	-1.9138
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	4	114840997	189836143	39654	0.011
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	5	967233	45334368	25876	0.0147
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	5	45334592	45339131	2	-2.1282
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	5	45339649	180293075	74426	0.0126
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	6	959281	44778308	26344	0.0112
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	6	44779065	44779104	2	-2.9015
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	6	44781376	170745844	69921	-0.0218
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	7	671810	96784317	49315	0.0118
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	7	96784426	96784635	3	-2.8092
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	7	96798351	150697926	28113	-0.0231
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	7	150707387	150707594	3	-1.6362
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	7	150710804	158077879	3723	-0.0652
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	8	607667	9253994	3735	-0.0663
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	8	9254334	9254605	3	-2.9481
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	8	9256066	139021886	75031	-0.0076
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	8	139021902	139026013	2	-2.5957
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	8	139026563	145304484	2586	0.0097
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	9	779932	140058573	67813	0.0067
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	10	405240	135075077	80683	0.0132
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	11	446120	48239868	29939	0.0085
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	11	48242000	48331067	41	-0.9107
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	11	48932932	133647740	47056	0.0123
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	12	760163	112444713	63594	0.0141
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	12	112445178	112445188	2	-2.0154
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	12	112445409	131671419	10114	0.0027
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	13	18348806	114005560	56497	-0.0344
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	14	19571208	105059083	49294	0.0077
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	15	21238778	99701830	44400	0.0073
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	16	593460	11209607	5699	0.0011
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	16	11213370	11217202	2	-1.7445
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	16	11217252	14285213	2264	0.0159
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	16	14285265	14285543	2	-2.2528
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	16	14286392	74741026	23596	0.0046
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	16	74744493	74744509	2	-3.3013
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	16	74749467	87907437	9190	0.0015
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	17	933971	39408019	17200	0.0113
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	17	39408173	39409380	2	-2.8469
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	17	39411444	78510305	19666	0.009
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	18	319586	53062107	30503	-0.0109
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	18	53062166	53063068	2	-2.2676
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	18	53069411	75210228	12047	-0.0661
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	19	235018	8687825	2594	0.0048
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	19	8688586	8688593	4	-1.492
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	19	8690715	63570038	21277	0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	20	403764	61690281	37193	0.0088
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	21	14269492	46503202	20534	0.0054
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	22	15803930	47717016	16891	0.004
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	X	3167107	71293440	27333	0.0038
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	X	71295747	71295780	2	-5.0372
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_F06_1359020	X	71295934	154558783	36049	0.0107
