Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	1	3218610	198915823	97208	0.0039
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	1	198916372	198919395	3	-1.6757
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	1	198919654	247813706	31307	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	2	484222	119995225	62264	0.0039
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	2	119995702	119996178	3	-1.7745
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	2	119997159	242476062	68411	0.0029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	3	2212571	197538677	105900	3e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	1053934	15492453	8631	0.0127
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	15494754	15496310	5	-1.1518
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	15497056	17930334	1747	-5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	17931327	17939457	3	-1.35
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	17941420	25775250	5006	-0.0073
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	25777149	25780801	3	-1.309
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	25780891	55858536	14860	-0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	55859248	55867442	3	-1.4491
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	55867789	57641010	950	-0.0051
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	57643948	57649190	3	-1.4083
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	57652778	63959060	3557	-0.0032
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	64159469	64160323	2	-2.249
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	64170477	140744913	41858	-0.0043
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	140745978	140747302	3	-2.2649
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	4	140751121	188763651	25751	-0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	5	914233	180360469	100115	-9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	6	1014281	170903919	96099	-0.0037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	7	705284	158385118	81013	-0.0033
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	8	617667	145232496	81199	-2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	9	789932	80666754	29922	-9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	9	80666802	80667684	3	-1.6425
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	9	80668122	115044648	22655	0.0077
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	9	115046403	115056614	2	-2.1508
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	9	115058305	140938752	15116	0.0107
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	10	415240	135225087	80489	8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	11	456120	134142530	76873	0.0028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	12	889902	133161346	73578	-0.0054
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	13	19450806	114987458	56380	4e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	14	20501368	23360444	927	-0.0162
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	14	23366578	23374435	9	-1.2471
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	14	23377568	105988038	48272	0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	15	23687685	101884307	44310	0.0057
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	16	653459	89379936	40608	0.0059
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	17	987221	12337534	6178	-0.0015
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	17	12337597	12338753	2	-2.5465
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	17	12339578	51853430	15159	-0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	17	51861584	51868201	14	-0.9883
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	17	51870056	80917016	15424	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	18	329586	60809860	34262	0.0056
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	18	60810240	60810452	2	-2.2012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	18	60811586	77109240	8211	2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	19	284018	30307451	10542	-0.014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	19	30308142	30308526	8	-1.5439
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	19	30310558	46903366	8424	-0.0084
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	19	46906997	46911127	2	-2.4306
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	19	46911182	47856192	346	2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	19	47856336	47864229	3	-1.3357
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	19	47864256	58878226	4482	-0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	20	455764	62219837	37142	0.0043
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	21	15347621	25585384	6174	0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	21	25588249	25588339	3	-1.7722
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	21	25588956	42463764	11558	-0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	21	42465472	42468914	8	-1.0086
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	21	42471944	47678774	2754	0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	22	17423930	49331012	16838	0.0069
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	3157107	12328028	3017	0.0136
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	12328691	12328979	2	-4.2584
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	12332556	14976159	1630	-0.0156
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	14976431	14976777	2	-5.2139
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	14977238	117487632	41723	0.0064
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	117489624	117489779	2	-5.0184
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	117489955	124530624	3666	-0.0113
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	124532488	124532873	3	-3.2573
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	124533090	144250103	8478	0.0059
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	144250422	144250516	2	-4.8306
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H03_1359148	X	144250912	154905589	4571	0.0096
