Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	1	3208470	245880329	128998	-0.0058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	474222	156059439	81780	-0.0024
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	156059641	156171707	66	-0.2656
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	156172088	188993502	18665	-0.0047
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	188995081	188996800	2	-1.9068
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	188999590	191697601	1519	-0.0035
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	191704251	191706797	3	-1.2847
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	191706988	194960811	1472	-0.0052
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	194962750	194963671	4	-0.9934
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	194967558	242124735	27739	-0.005
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	3	526235	14362158	7332	-0.0114
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	3	14362174	14365511	4	-1.3582
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	3	14366124	199023074	98989	0.0419
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	1043934	30400115	18558	-0.0048
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	30410181	30423158	10	-0.7464
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	30423605	53761762	10326	0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	53765718	53774999	6	-1.0633
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	53781496	155646898	56103	-0.0171
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	155649045	155650116	5	-1.1422
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	155651622	164173475	5025	-0.0075
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	164173911	164174795	8	-0.7675
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	164174814	175581142	5991	-0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	175581612	175585574	2	-1.6745
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	175587018	189836143	6662	-0.012
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	5	967233	83985102	44989	-0.0035
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	5	83987989	83990457	2	-1.3969
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	5	83994660	180293075	55468	-0.0198
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	959281	34819855	20213	-0.0071
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	34821681	34822300	5	-0.8489
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	34825266	36981765	1075	-0.0236
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	36982364	36982429	3	-1.4587
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	36983861	56008167	11904	-0.0124
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	56013100	56014908	5	-0.9236
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	56021826	115389138	30455	-0.1264
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	115389491	115392076	3	-1.7718
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	115397033	152343386	22228	-0.0181
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	152345925	152353586	11	-0.9259
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	152353601	152798779	331	-0.0039
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	152800023	152803688	2	-1.4484
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	152804282	170745844	10207	-0.0062
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	7	671810	82369970	41984	-0.0061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	7	82370169	82370179	2	-1.9041
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	7	82376183	135139161	27500	-0.0072
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	7	135155840	135158802	6	-0.8742
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	7	135160781	158077879	11799	-0.0061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	607667	3843429	1665	-0.0302
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	3855168	3862811	18	-0.8586
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	3863725	119428265	63494	-0.011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	119429404	119437899	7	-0.9256
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	119439898	124728284	3487	-2e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	124728302	124728510	2	-1.5627
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	124728901	138864042	10099	-0.0161
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	138865207	138865981	2	-1.5017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	138866054	140579876	1379	-0.0256
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	140580071	140581139	7	-0.6727
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	140581239	145304484	1341	-0.0128
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	9	779932	73299403	25629	-0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	9	73299544	73310379	9	-0.8461
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	9	73311825	120265228	31389	-0.0069
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	9	120265483	120266443	2	-2.1724
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	9	120266677	140058573	10931	-0.0071
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	10	405240	52927133	30077	0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	10	52931457	52933843	6	-1.1166
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	10	52937359	135075077	50737	0.0306
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	446120	49735631	30396	0.1595
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	49743745	50007872	111	-0.1921
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	50011906	56120295	190	0.1365
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	56122367	61170969	2820	-0.1936
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	61172520	80659680	9628	0.1563
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	80699487	82296165	933	-0.1976
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	82296866	133647740	33144	0.1625
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	12	760163	15790517	8428	-0.0015
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	12	15790802	15795684	6	-0.9956
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	12	15802316	60632217	23788	-0.0067
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	12	60633391	60634194	2	-1.5746
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	12	60638100	131671419	41695	-0.0083
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	13	18348806	79676954	35462	-0.0081
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	13	79678016	79681387	2	-1.7421
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	13	79683029	114005560	21155	-0.0076
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	14	19571208	105059083	49410	-0.0241
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	15	21238778	99701830	44509	-0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	16	593460	79204854	35571	-0.005
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	16	79204885	79204900	2	-3.6682
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	16	79205051	80490686	848	-0.0121
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	16	80492138	80494664	2	-2.1443
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	16	80494794	87907437	4419	7e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	17	933971	78510305	36968	-0.0119
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	319586	3754252	1453	0.0041
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	3758176	3760538	4	-0.9116
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	3765016	5535820	1239	-0.0156
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	5538879	5539422	2	1.2504
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	5539462	46252052	23512	-0.0016
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	46252179	46252526	10	-0.6693
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	46255283	75210228	16433	-0.0057
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	19	235018	63570038	23927	-0.0055
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	20	403764	6164980	3415	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	20	6165944	6169206	2	-1.4737
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	20	6169768	61690281	33843	-0.0072
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	21	14269492	22109985	5053	-0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	21	22110049	22123033	11	-0.8569
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	21	22127413	30560830	5387	-0.012
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	21	30562099	30564908	6	-0.9438
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	21	30572450	46503202	10119	-0.01
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	22	15803930	47717016	16922	-0.0028
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	3167107	17534792	5818	-6e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	17537794	17560123	14	-0.6428
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	17560304	20424782	1085	-0.0186
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	20424837	20428298	5	-1.0388
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	20428490	26911460	3330	-0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	26911573	26913861	3	-1.3319
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	26913903	29204229	1335	-0.0141
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	29206222	29206774	2	-1.8676
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	29208007	39765020	4826	-0.0076
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	39768338	39769844	2	-2.0868
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	39770574	69001981	10088	-0.0112
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	69013405	69825233	240	0.293
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	69825463	154558783	36587	0.013
