Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	1	3218610	247813706	129054	-0.0058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	484222	156351193	81769	-0.0024
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	156351395	156463461	66	-0.2656
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	156463842	189285257	18666	-0.0047
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	189286836	189288555	2	-1.9068
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	189291345	191989356	1519	-0.0035
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	191996006	191998552	3	-1.2847
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	191998743	195252566	1473	-0.0052
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	195254505	195255426	4	-0.9934
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	2	195259313	242476062	27740	-0.0051
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	3	2212571	14387154	7330	-0.0116
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	3	14387170	14390507	4	-1.3582
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	3	14391120	197538677	98985	0.0419
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	1053934	30791017	18559	-0.0048
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	30801083	30814060	10	-0.7464
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	30814507	54067005	10326	0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	54070961	54080242	6	-1.0633
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	54086739	155427448	56107	-0.0171
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	155429595	155430666	5	-1.1422
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	155432172	163954025	5025	-0.0075
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	163954461	163955345	8	-0.7675
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	163955364	175344567	5992	-0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	175345037	175348999	2	-1.6745
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	4	175350443	188763651	6661	-0.0121
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	5	914233	83949346	44990	-0.0035
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	5	83952233	83954701	2	-1.3969
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	5	83958904	180360469	55467	-0.0198
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	1014281	36873787	21294	-0.0082
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	36874386	36874451	3	-1.4587
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	36875883	55900208	11905	-0.0124
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	55905141	55906949	5	-0.9236
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	55913867	115282445	30455	-0.1264
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	115282798	115285383	3	-1.7718
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	115290340	152301693	22235	-0.0181
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	152304232	152311893	11	-0.9259
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	152311908	152757086	331	-0.0039
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	152758330	152761995	2	-1.4484
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	6	152762589	170903919	10207	-0.0062
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	7	705284	82532034	41983	-0.0061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	7	82532233	82532243	2	-1.9041
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	7	82538247	135488621	27504	-0.0072
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	7	135505300	135508262	6	-0.8742
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	7	135510241	158385118	11797	-0.0062
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	617667	3856021	1666	-0.03
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	3867760	3875403	18	-0.8586
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	3876317	119359084	63501	-0.011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	119360223	119368718	7	-0.9256
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	119370717	124659103	3486	-1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	124659121	124659329	2	-1.5627
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	124659720	138794860	10099	-0.0161
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	138796025	138796799	2	-1.5017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	138796872	140510694	1379	-0.0256
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	140510889	140511957	7	-0.6727
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	8	140512057	145232496	1341	-0.0128
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	9	789932	74109583	25635	-0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	9	74109724	74120559	9	-0.8461
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	9	74122005	121225407	31395	-0.0069
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	9	121225662	121226622	2	-2.1724
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	9	121226856	140938752	10931	-0.0071
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	10	415240	53257127	30077	0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	10	53261451	53263837	6	-1.1166
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	10	53267353	135225087	50735	0.0306
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	456120	49779055	30392	0.1595
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	49787169	50051296	111	-0.1921
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	50055330	56363719	190	0.1365
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	56365791	61414393	2820	-0.1936
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	61415944	80982032	9629	0.1563
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	81021839	82618517	932	-0.1975
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	11	82619218	134142530	33138	0.1625
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	12	889902	15899250	8426	-0.0016
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	12	15899535	15904417	6	-0.9956
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	12	15911049	62345950	23785	-0.0068
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	12	62347124	62347927	2	-1.5746
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	12	62351833	133161346	41695	-0.0083
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	13	19450806	80778953	35459	-0.0082
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	13	80780015	80783386	2	-1.7421
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	13	80785028	114987458	21154	-0.0076
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	14	20501368	105988038	49408	-0.0241
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	15	23687685	101884307	44507	-0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	16	653459	80647353	35505	-0.005
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	16	80647384	80647399	2	-3.6682
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	16	80647550	81933185	848	-0.0121
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	16	81934637	81937163	2	-2.1443
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	16	81937293	89379936	4419	7e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	17	987221	80917016	36968	-0.0119
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	329586	3764252	1454	0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	3768176	3770538	4	-0.9116
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	3775016	5545820	1240	-0.0155
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	5548879	5549422	2	1.2504
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	5549462	47998054	23510	-0.0016
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	47998181	47998528	10	-0.6693
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	18	48001285	77109240	16430	-0.0058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	19	284018	58878226	23927	-0.0055
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	20	455764	6216980	3417	6e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	20	6217944	6221206	2	-1.4737
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	20	6221768	62219837	33844	-0.0072
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	21	15347621	23188114	5053	-0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	21	23188178	23201162	11	-0.8569
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	21	23205542	31638959	5388	-0.012
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	21	31640228	31643037	6	-0.9438
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	21	31650579	47678774	10117	-0.01
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	22	17423930	49331012	16921	-0.0028
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	3157107	17624871	5819	-3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	17627873	17650202	14	-0.6428
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	17650383	20514861	1085	-0.0186
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	20514916	20518377	5	-1.0388
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	20518569	27001539	3330	-0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	27001652	27003940	3	-1.3319
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	27003982	29294308	1335	-0.0141
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	29296301	29296853	2	-1.8676
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	29298086	39880076	4825	-0.0077
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	39883394	39884900	2	-2.0868
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	39885630	69085256	10096	-0.011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	69096680	69908508	241	0.292
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_A07_1438564	X	69908738	154905589	36595	0.0129
