Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	1	3218610	170617446	80706	0.0047
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	1	170618239	170618979	3	-1.0621
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	1	170623109	240366512	44213	0.0046
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	1	240367507	240367522	2	-1.692
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	1	240367775	247813706	4157	0.0176
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	2	484222	242476062	131261	0.0055
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	2212571	65122278	36619	0.0088
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	65123483	65123521	2	-1.3856
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	65124098	104633374	20084	0
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	104633582	104633596	2	-1.435
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	104635835	158331051	29885	0.0041
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	158337765	158339541	2	-1.6088
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	158341622	171137651	6358	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	171139467	171140827	3	-1.1095
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	171143218	174049405	1386	-3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	174050915	174051038	2	-1.2067
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	3	174052729	197538677	11990	0.0041
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	4	1053934	168795294	92536	0.0067
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	4	168795315	177455498	4731	-0.1923
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	4	177465198	177465316	2	-1.8107
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	4	177468979	180951495	1772	-0.1896
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	4	180952834	188763651	3686	0.0168
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	914233	45361098	25930	0.0088
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	45365059	68318642	10935	-0.1965
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	68319687	68320768	3	-1.4767
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	68321186	92294154	12329	-0.1411
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	92298111	92299181	2	0.8331
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	92302326	92428177	77	-0.2078
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	92436050	97655286	2762	0.0072
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	97659388	97666247	6	-0.6613
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	97667011	110523293	6078	0.0028
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	110523899	110523923	2	1.1514
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	110524087	111936924	995	-7e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	111941838	111943552	3	-1.1019
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	111944746	116716550	3004	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	116716600	116793793	66	-0.1933
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	116797153	130338173	7759	0.0032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	130347994	130354295	2	-1.3378
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	130356643	142859606	7152	0.0088
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	142862611	142862653	2	-1.3393
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	142866564	157279942	9360	0.0025
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	157281808	157291691	3	-1.2105
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	157293727	163134544	3748	0.0049
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	163134813	163210888	39	-0.2447
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	5	163211005	180360469	10232	0.0119
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	6	1014281	170903919	96472	-0.0156
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	7	705284	13540250	5817	0.0204
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	7	13545964	13559517	11	-1.1455
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	7	13561595	158385118	75473	0.0195
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	8	617667	28343234	16516	-0.1755
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	8	28344769	28344891	2	-0.9195
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	8	28348626	134389219	59054	0.0785
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	8	134390668	134390976	2	-1.7342
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	8	134391051	145232496	5956	0.0901
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	9	789932	140938752	67986	0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	10	415240	8267318	5358	0.0181
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	10	8268684	8268705	2	-1.3949
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	10	8269706	135225087	75486	0.0154
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	11	456120	8896255	4501	0.014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	11	8899400	8899668	3	-1.0684
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	11	8900394	96204301	47670	0.0062
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	11	96204781	96243189	20	-1.2346
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	11	96286817	130687703	22784	0.0024
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	11	130689818	130721704	36	-0.2162
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	11	130728682	134142530	2204	0.014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	889902	20986724	11514	-0.1906
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	20992743	33521107	8040	0.3331
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	39223566	57235970	9633	0.0077
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	57237761	57240377	2	-1.1431
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	57240444	67773743	6331	0.0183
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	67774183	67774745	2	-0.9276
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	67775149	69198112	1039	0.0499
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	69199207	92928221	14178	0.3539
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	92931585	92932627	2	-0.3582
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	92932885	121037948	17592	0.2024
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	121041728	121056636	7	-0.2259
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	121056754	122265163	616	0.2198
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	122266483	122301738	11	-0.2655
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	122308337	122747256	172	0.2274
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	122758841	129144856	3422	-0.1933
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	129146016	129147544	3	-1.3703
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	12	129148984	133161346	1359	-0.1758
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	13	19450806	81504843	35892	0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	13	81510639	81712640	115	-0.1978
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	13	81716853	114987458	20627	0.0061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	14	20501368	60013267	21603	0.003
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	14	60027043	60958912	500	-0.2128
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	14	60959565	105988038	27322	0.0024
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	15	23687685	101884307	44515	0.0061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	653459	8047081	3242	0.1146
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	8047761	8171910	73	-0.1542
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	8172228	11660193	2621	0.1273
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	11660702	13364121	1220	-0.1515
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	13364255	14115194	667	0.1443
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	14116026	14163666	26	-0.1513
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	14167014	21230239	1617	0.0936
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	21233004	23304943	369	-0.1412
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	23311768	24145028	530	0.1054
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	24145292	25544514	855	-0.1597
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	25548707	52514627	6341	0.0929
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	52518673	77612895	15229	-0.1679
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	77612950	77613373	2	-1.5434
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	16	77614721	89379936	7983	-0.173
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	17	987221	80917016	36967	0.0049
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	18	329586	46255365	25077	-0.1664
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	18	46255750	46256295	3	-1.4149
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	18	46258436	77109240	17572	-0.1631
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	19	284018	5633238	1372	0.0094
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	19	5633878	5636364	3	-1.0926
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	19	5637888	10963022	2253	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	19	10966901	10969914	3	-1.3715
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	19	10973691	11163689	95	0.0131
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	19	11168662	11169052	2	-1.1321
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	19	11177408	31284806	7523	0.0067
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	19	31288118	31288540	2	1.5387
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	19	31290599	58878226	12677	0.0073
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	20	455764	4931247	2771	0.0104
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	20	4931592	4966531	19	-0.9652
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	20	4971378	59503956	33178	0.0068
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	20	59506118	59509778	3	-1.0524
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	20	59513213	62219837	1304	0.0077
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	21	15347621	44383252	19249	0.0088
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	21	44387473	44391175	2	-1.3646
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	21	44391810	47678774	1325	0.0031
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	22	17423930	49331012	16924	0.0095
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	3157107	79125492	29842	9e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	79125677	79132256	11	-0.7959
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	79132922	79252707	55	-0.1041
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	79252749	79271535	24	-0.7899
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	79271649	96975616	6937	-3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	96975665	96976154	11	-0.6782
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	96976345	103136160	3036	0.0047
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	103136924	103136973	2	1.36
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	103137418	103546627	125	0.0536
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	103546750	103546787	2	-1.9303
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	103551088	111262161	3586	0.0108
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	111265600	111286591	18	-0.4045
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	111286702	111290236	3	-1.7387
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	111290583	116620571	2402	0.0073
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	116620693	116621133	3	-1.3691
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	116621356	116857047	142	-0.0372
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	116857516	116861224	19	-0.8579
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B01_1438688	X	116861624	154905589	17164	0.0093
