Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	1	3218610	10488555	4110	0.037
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	1	10496342	11038476	264	-0.4509
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	1	11038604	46238071	18366	0.0434
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	1	46262129	49380258	1755	-0.4695
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	1	49380695	49380708	2	-2.256
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	1	49380904	60307802	6696	-0.4732
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	1	60316016	244475829	96442	0.0199
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	1	244476134	246120528	938	-0.4635
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	1	246124691	247813706	476	0.0233
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	484222	47214579	27988	0.0201
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	47214636	47846190	365	-0.4709
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	47846246	47848236	2	-1.7377
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	47849003	48511311	322	-0.4665
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	48514144	48624630	52	-0.0099
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	48633235	49390942	401	-0.4611
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	49391013	49404365	12	0.0512
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	49406786	50654425	845	-0.5032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	50657549	86282960	19599	0.0138
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	86513893	87099193	271	-0.4824
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	87099920	137166428	21076	0.0177
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	137166475	138379023	879	-0.4797
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	2	139069835	242476062	59428	0.0093
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	3	2212571	49883157	27611	0.0232
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	3	49890613	50059339	66	-0.4295
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	3	50065789	197538677	78633	0.0199
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	4	1053934	19508831	11395	0.0244
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	4	19509471	19509525	2	-1.6048
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	4	19509600	89950839	37867	0.014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	4	89954556	90169025	189	0.3542
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	4	90169925	188763651	53268	0.0099
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	5	914233	51618407	26720	3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	5	51618743	51623070	2	-2.3967
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	5	51630045	66525909	8920	0.0165
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	5	66526209	72168240	2318	-0.5131
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	5	72171484	180360469	62510	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	6	1014281	76454386	41739	0.0204
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	6	76455013	116242740	22390	-0.4876
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	6	116243378	116243394	2	-2.8423
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	6	116246118	143819389	16086	-0.4931
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	6	143820009	143820779	2	-2.5123
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	6	143821047	170903919	16184	-0.4904
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	7	705284	81667117	41549	0.0967
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	7	81669410	123475221	21332	0.4302
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	7	123477812	123479304	2	-0.9675
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	7	123483112	158385118	18422	0.432
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	8	617667	83831132	45492	0.0171
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	8	83848261	145232496	36037	0.3675
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	9	789932	25509545	15689	0.011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	9	25517942	25518344	2	1.3111
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	9	25519811	38747064	7628	0.0145
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	9	38747688	130999472	39892	0.3633
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	9	131000874	131009467	4	-0.3785
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	9	131010726	140938752	4766	0.3829
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	10	415240	135225087	80825	0.0212
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	456120	1660724	356	0.0248
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	1665671	3233405	607	-0.464
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	3249829	46270441	28192	0.0173
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	46270846	46562102	114	-0.48
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	46568309	46609176	20	-1.03
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	46610289	46695336	35	-0.4667
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	46699124	46913547	89	0.0498
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	46915058	47394317	171	-0.4682
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	47396222	87377942	17309	0.0277
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	87378183	87425040	27	-0.5099
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	87427082	108307591	12577	0.0164
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	108308713	108467277	73	-0.515
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	108467817	113155980	3025	0.0204
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	113156746	114141125	726	-0.4815
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	114142085	114271207	112	0.0123
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	114271222	114337749	48	-0.4718
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	114340137	114447918	79	-0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	114450529	114586303	70	-0.4562
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	114587154	130433733	11285	0.0278
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	130632761	130653735	17	-0.5075
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	11	130654405	134142530	2267	0.0257
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	12	889902	39223566	19533	-0.4735
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	12	39228083	57065713	9563	0.0282
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	12	57066105	57389818	167	-0.3893
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	12	57397340	77706599	12359	0.0168
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	12	77711347	77712313	2	-1.5987
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	12	77712320	133161346	32265	0.0247
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	13	19450806	110710304	54420	0.0163
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	13	110711818	110735764	22	0.4503
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	13	110739830	114987458	2185	0.0264
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	14	20501368	88983058	39418	0.0106
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	14	88985138	88994149	8	-0.5614
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	14	88999959	105988038	9992	0.0286
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	15	23687685	101884307	44510	0.0166
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	16	653459	31850299	13876	0.0399
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	16	46507665	89379936	26887	-0.4662
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	987221	7944609	3302	-0.4403
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	7951149	26864708	7085	0.0367
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	26869977	26919017	21	-0.3402
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	26923304	28328819	579	0.051
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	28328843	28389576	23	-0.3898
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	28392212	28484621	47	0.045
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	28492755	31896324	1859	-0.4355
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	31896559	31897097	2	-1.974
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	31897245	43511538	4935	-0.428
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	44811098	49033169	2124	0.0354
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	17	49038721	80917016	16957	-0.4602
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	18	329586	77109240	42647	0.0209
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	19	284018	58878226	23931	0.0289
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	20	455764	62219837	37269	0.0272
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	21	15347621	39837386	15746	0.023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	21	39839151	42867190	2440	-0.4765
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	21	42867429	47678774	2388	0.0405
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	22	17423930	49331012	16921	-0.0038
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	X	3157107	82126064	31203	0.0034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	X	82131754	82156285	20	-2.9079
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B05_1438514	X	82157644	154905589	32146	0.0026
