Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	1	3208470	236985036	123817	7e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	1	236985307	236985319	2	-1.8723
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	1	236985367	240377206	2450	0.0015
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	1	240387283	240396437	16	-1.1552
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	1	240396828	245880329	2748	-0.0064
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	474222	9331721	5333	0.0115
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	9332433	9334108	2	-2.0255
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	9334785	50343183	24558	0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	50343433	50343446	2	-2.2339
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	50354911	155476080	51643	0.0095
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	155478524	155481239	2	-1.976
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	155484969	242124735	49735	0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	3	526235	199023074	106344	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	1043934	5456170	2013	0.0138
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	5461093	5462992	7	-0.9624
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	5464426	35522844	19308	0.0012
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	35524746	35527801	5	-1.1382
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	35538108	109710013	38653	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	109711881	109739714	3	-2.2462
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	109749774	125678855	9058	0.004
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	125679801	125682385	3	-1.8246
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	125682475	189836143	33678	0.0013
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	5	967233	104260985	54685	-0.0015
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	5	104262266	104262282	2	-2.4221
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	5	104267256	164654604	36426	7e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	5	164654872	164658352	4	-1.1593
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	5	164660195	180293075	9371	0.0057
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	6	959281	17045787	11329	-0.0013
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	6	17045804	17046603	3	-1.3201
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	6	17048497	170745844	85137	0.0019
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	7	671810	146490226	75294	0.0012
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	7	146495202	146499544	7	-1.1928
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	7	146505616	158077879	6001	0.0034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	8	607667	145304484	81531	0.0049
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	9	779932	140058573	67974	-0.0014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	405240	42844634	26426	0.0069
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	42844707	42845748	2	-1.8265
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	42846029	70279073	13892	0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	70280611	70301635	17	-0.4751
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	70301789	116010138	28136	0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	116012686	116012743	2	-1.6405
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	116016282	135075077	12374	0.009
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	446120	12755614	7356	0.0016
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	12762392	12765294	6	-1.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	12767178	37807717	16309	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	37808071	37808091	2	-4.4189
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	37812846	80336523	19247	0.0048
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	80344107	81014305	423	-1.1424
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	81016689	81041215	23	0.0045
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	81041583	81055751	10	-0.7205
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	81055781	133637834	33857	0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	133642343	133647740	3	-1.3629
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	760163	60182740	31951	-0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	60183412	60183681	3	-1.3946
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	60185426	79345767	11700	-0.0065
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	79349306	79352244	5	-1.0154
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	79352849	80736780	886	0.0053
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	80743507	80746683	4	-1.3147
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	80757410	131671419	29372	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	13	18348806	86741461	39398	0.0043
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	13	86744089	86761103	10	-0.994
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	13	86763932	114005560	17231	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	14	19571208	105059083	49429	0.0034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	15	21238778	57507085	19511	1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	15	57510545	57510557	2	-2.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	15	57513902	95350225	22576	0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	15	95350621	95353264	2	-1.4654
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	15	95353461	99701830	2426	-0.0055
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	16	593460	87907437	40853	0.0035
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	17	933971	78510305	36978	0.0055
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	18	319586	28231743	15010	3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	18	28235023	28235026	3	-1.3798
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	18	28236501	31143024	1755	4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	18	31145030	31145654	2	-2.0106
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	18	31147013	75210228	25893	-3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	19	235018	53169146	19693	0.0078
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	19	53169288	53169861	4	-1.3034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	19	53169879	54910995	709	-0.0032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	19	54914286	54923940	10	0.6529
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	19	54926160	63570038	3519	-2e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	20	403764	23113015	15307	-4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	20	23118731	23122394	7	-1.0802
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	20	23124512	61690281	21954	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	21	14269492	46503202	20576	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	22	15803930	47144714	16505	0.008
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	22	47144811	47145575	4	-1.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	22	47146860	47717016	418	0.0237
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	3167107	116741075	46161	0.0093
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	116741544	116745252	19	-1.0096
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	116745652	127345354	5197	-0.0086
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	127548599	127549007	2	-4.3948
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	127551455	128642787	649	0.0338
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	128645313	128651631	8	-0.9909
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	128652285	128709938	47	-0.0181
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	128710005	128719173	6	-1.2623
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	128721041	144360582	6871	0.0221
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	144363797	144364360	2	2.4058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	144365093	148885149	2464	-7e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	148885213	148889856	4	-1.7232
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	148889909	154558783	1912	-0.0011
