Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	1	3218610	238918413	123873	7e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	1	238918684	238918696	2	-1.8723
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	1	238918744	242310583	2450	0.0015
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	1	242320660	242329814	16	-1.1552
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	1	242330205	247813706	2747	-0.0064
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	484222	9414270	5332	0.0114
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	9414982	9416657	2	-2.0255
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	9417334	50489679	24556	0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	50489929	50489942	2	-2.2339
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	50501407	155767834	51635	0.0095
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	155770278	155772993	2	-1.976
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	2	155776723	242476062	49738	0.009
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	3	2212571	197538677	106338	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	1053934	5405269	2013	0.0138
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	5410192	5412091	7	-0.9624
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	5413525	35846449	19309	0.0012
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	35848351	35851406	5	-1.1382
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	35861713	109490564	38653	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	109492432	109520265	3	-2.2462
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	109530325	125459405	9061	0.004
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	125460351	125462935	3	-1.8246
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	4	125463025	188763651	33679	0.0013
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	5	914233	104233086	54685	-0.0016
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	5	104234367	104234383	2	-2.4221
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	5	104239357	164722026	36425	7e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	5	164722294	164725774	4	-1.1593
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	5	164727617	180360469	9372	0.0057
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	6	1014281	16937808	11330	-0.0013
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	6	16937825	16938624	3	-1.3201
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	6	16940518	143596413	68766	0.004
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	6	143598107	143601014	2	-1.5388
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	6	143601132	170903919	16377	-0.0069
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	7	705284	146859293	75295	0.0012
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	7	146864269	146868611	7	-1.1928
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	7	146874683	158385118	6001	0.0034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	8	617667	145232496	81538	0.005
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	9	789932	140938752	67986	-0.0014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	415240	43524628	26426	0.0069
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	43524701	43525742	2	-1.8265
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	43526023	70609067	13892	0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	70610605	70631629	17	-0.4751
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	70631783	116020148	28134	0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	116022696	116022753	2	-1.6405
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	10	116026292	135225087	12374	0.009
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	456120	12799038	7355	0.0016
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	12805816	12808718	6	-1.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	12810602	37851141	16307	4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	37851495	37851515	2	-4.4189
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	37856270	80658875	19247	0.0048
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	80666459	81336657	422	-1.1436
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	81339041	81363567	23	0.0045
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	81363935	81378103	10	-0.7205
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	81378133	134132624	33851	0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	11	134137133	134142530	3	-1.3629
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	889902	61896473	31946	-0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	61897145	61897414	3	-1.3946
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	61899159	80821636	11700	-0.0065
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	80825175	80828113	5	-1.0154
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	80828718	82212649	886	0.0053
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	82219376	82222552	4	-1.3147
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	12	82233279	133161346	29372	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	13	19450806	87943460	39395	0.0043
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	13	87946088	87963102	10	-0.994
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	13	87965931	114987458	17230	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	14	20501368	105988038	49427	0.0034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	15	23687685	59719793	19511	2e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	15	59723253	59723265	2	-2.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	15	59726610	97549221	22575	0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	15	97549617	97552260	2	-1.4654
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	15	97552457	101884307	2425	-0.0056
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	16	653459	89379936	40788	0.0034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	17	987221	80917016	36978	0.0055
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	18	329586	29977745	15010	3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	18	29981025	29981028	3	-1.3798
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	18	29982503	32889026	1755	4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	18	32891032	32891656	2	-2.0106
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	18	32893015	77109240	25890	-3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	19	284018	48477334	19693	0.0078
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	19	48477476	48478049	4	-1.3034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	19	48478067	50219183	709	-0.0032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	19	50222474	50232128	10	0.6529
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	19	50234348	58878226	3519	-2e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	20	455764	23165015	15310	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	20	23170731	23174394	7	-1.0802
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	20	23176512	62219837	21954	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	21	15347621	47678774	20575	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	22	17423930	48766050	16504	0.008
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	22	48766147	48766911	4	-1.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	22	48768196	49331012	418	0.0237
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	3157107	116857047	46179	0.0093
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	116857516	116861224	19	-1.0096
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	116861624	127517673	5199	-0.0085
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	127720918	127721326	2	-4.3948
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	127723774	128815106	649	0.0338
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	128817632	128823950	8	-0.9909
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	128824604	128882257	47	-0.0181
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	128882324	128891492	6	-1.2623
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	128893360	144552890	6869	0.0221
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	144556105	144556668	2	2.4058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	144557401	149134491	2463	-6e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	149134555	149139198	4	-1.7232
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B06_1438584	X	149139251	154905589	1912	-9e-04
