Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	1	3218610	49353765	24481	0.0189
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	1	49354711	50932289	688	0.3273
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	1	50935031	242310583	101142	-0.0147
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	1	242320660	242329814	16	-0.719
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	1	242330205	247813706	2747	-0.0036
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	2	484222	242476062	131244	-0.0136
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	3	2212571	19129988	10167	-1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	3	19131933	19135728	3	-1.4537
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	3	19139059	28219129	5071	-0.0159
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	3	28220578	28225692	3	-1.0901
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	3	28226208	197538677	91091	-0.0192
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	4	1053934	71992530	38600	-0.0131
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	4	71995660	71996897	2	-2.2966
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	4	71997259	109490564	21371	-0.0242
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	4	109492432	109520265	3	-1.488
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	4	109530325	148878282	21505	-0.0217
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	4	148881924	150207003	712	-0.5764
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	4	150214555	188763651	20524	-0.0254
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	5	914233	58749904	31445	-0.0204
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	5	58753029	58920056	121	0.3084
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	5	58920593	111111798	26935	-0.0291
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	5	111112994	111113755	2	2.3469
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	5	111115017	114756455	2530	-0.0318
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	5	114756637	114759078	6	-0.9169
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	5	114759167	180360469	39439	-0.0107
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	6	1014281	170903919	96475	-0.0194
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	7	705284	97346976	49648	-0.0137
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	7	97348405	97354134	2	-1.5485
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	7	97354575	146859293	25628	-0.0213
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	7	146864269	146874838	9	-0.8566
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	7	146878931	158385118	5997	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	617667	2978078	946	-0.5448
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	2978749	2980976	3	-6.7674
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	2984683	26668216	14294	-0.554
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	26672727	40356806	7941	0.5674
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	40359895	40611871	174	-0.0046
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	40614509	40786645	111	0.5813
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	40788019	40846162	44	-0.0091
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	40846474	41099406	150	0.5368
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	41102350	47997027	1280	-0.0145
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	47997140	48122057	47	0.5765
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	48122669	49171389	375	-0.009
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	49174248	49296557	69	0.5822
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	49298421	50240605	560	-0.0211
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	50245215	50349336	49	0.5861
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	50350073	50365234	10	0.0359
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	50366271	50428751	43	0.5986
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	50545165	50574752	19	0.0236
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	50576151	51030746	184	0.6224
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	51038619	52226463	703	-0.0392
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	52230102	52249858	9	0.6527
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	52253466	52562522	207	-0.028
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	52563202	52683503	93	0.5761
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	52689122	53846801	661	-0.0379
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	53849301	53903682	36	0.6574
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	53908666	54076014	47	-0.0052
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	54077183	58093297	2379	0.6052
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	58095807	58506236	275	0.3135
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	58508344	58523839	15	0.7922
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	58528920	58803166	190	0.2875
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	58804322	58992531	120	0.6022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	59001612	59274806	211	-0.0426
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	59275325	102233239	24459	0.7403
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	102233949	102236880	3	1.8201
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	102243952	138967171	23213	0.5538
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	8	138980900	145232496	2576	-0.5257
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	9	789932	120685018	56672	-0.0144
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	9	120688923	120697951	2	1.4844
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	9	120700805	140938752	11300	0.01
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	10	415240	66398678	38172	-0.0077
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	10	66399409	66399869	2	-2.2095
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	10	66402831	130138089	40350	-0.0033
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	10	130141826	130142288	2	-1.6067
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	10	130144018	135225087	2303	0.0093
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	11	456120	80658875	42910	-0.0077
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	11	80666459	81324003	414	-0.7963
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	11	81325999	134142530	33882	-0.0093
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	889902	11474657	5556	-0.5037
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	11475443	11477123	2	-3.0779
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	11477351	26690654	9686	-0.5437
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	26691094	29621673	1754	-0.0437
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	29622966	32769752	2101	-0.5355
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	32775910	51119440	6795	-0.0118
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	51125017	52940729	961	0.3818
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	52942010	61774185	4984	-0.0218
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	61774226	80821636	11782	0.3252
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	80825175	80828113	5	-0.8258
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	80828718	94782307	8252	0.3246
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	94791711	95160364	276	-0.0454
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	95160443	105903347	6979	0.3265
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	105903875	106777218	744	0.0077
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	106787254	112170376	2870	0.3321
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	112322977	122143419	6124	-0.0034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	12	122148727	133161346	5000	-0.5084
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	13	19450806	31720388	7484	-0.0084
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	13	31724793	51998403	12333	-0.5375
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	13	51999333	87943460	19561	-0.0263
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	13	87946088	87963102	10	-0.7064
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	13	87965931	91560386	2010	-0.0278
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	13	91563007	92891669	844	-0.5704
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	13	92896526	109975828	11615	-0.0163
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	13	109979184	109979455	2	-2.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	13	109979470	114987458	2755	0.0078
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	14	20501368	36252062	8390	-0.0212
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	14	36253831	38008681	1206	0.3171
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	14	38009298	105988038	39826	-0.0097
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	15	23687685	37474721	6374	-0.0077
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	15	37475112	37476433	2	-1.8221
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	15	37477952	101884307	38136	-0.0052
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	16	653459	89379936	40776	0.0064
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	17	987221	6599365	2758	0.0249
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	17	6600547	9430225	1456	-0.4781
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	17	9430850	34267072	9480	0.0107
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	17	34268252	35521765	525	-0.4978
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	17	35522551	80917016	22740	0.0052
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	18	329586	32889026	16765	-0.0132
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	18	32891032	32891656	2	-1.9643
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	18	32893015	77109240	25887	-0.0107
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	19	284018	6055206	1520	0.0237
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	19	6059840	7807610	670	-0.4755
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	19	7809327	55619460	20101	0.0163
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	19	55622604	55622741	2	1.4684
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	19	55622921	58878226	1637	0.0278
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	20	455764	62219837	37272	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	21	15347621	35309548	12663	-0.0172
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	21	35311743	36624549	875	-0.5208
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	21	36629232	47678774	7032	0.0049
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	22	17423930	49331012	16918	0.016
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	X	3157107	9683248	1572	0.0301
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	X	9684738	9684778	2	-2.1626
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_B07_1438614	X	9685901	154905589	61779	0.0025
