Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	1	3208470	166838455	79082	0.0045
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	1	166839798	166841322	4	-1.0098
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	1	166846716	236921904	44667	0.0032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	1	236922261	236922717	3	-1.4523
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	1	236929072	245880329	5254	-2e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	474222	36387326	21382	0.0056
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	36387988	36394852	3	-1.231
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	36398673	75970191	22742	0.0015
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	75971715	75974258	3	-1.1311
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	75987529	178472157	51113	0.007
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	178476203	178476929	3	1.2275
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	178478547	242124735	36002	0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	3	526235	199023074	106323	-1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	4	1043934	73963099	39575	0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	4	73963113	74282540	179	0.5603
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	4	74297316	139824301	36399	0
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	4	139824456	139826092	2	-1.5261
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	4	139828121	189836143	26553	0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	5	967233	66673527	35719	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	5	66674658	66684178	8	-0.9557
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	5	66687599	180293075	64759	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	6	959281	69559332	37697	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	6	69559785	69559955	4	-0.95
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	6	69560087	170745844	58752	2e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	7	671810	158077879	81294	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	607667	32041263	18681	8e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	32041715	32042229	2	-1.4308
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	32045053	64502635	15787	0.0014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	64502816	64503151	2	-1.5578
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	64510847	82540661	10274	0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	82540684	82540690	2	-1.2649
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	82542202	145304484	36762	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	9	779932	140058573	67961	-0.0031
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	10	405240	3497303	1598	0.0084
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	10	3497739	3498004	2	-1.2919
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	10	3501957	14292611	8372	0.0085
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	10	14293138	14295048	2	-1.4097
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	10	14295669	135075077	70846	0.0067
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	11	446120	133647740	77217	0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	12	760163	40653134	21517	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	12	40661562	40669313	10	-1.1449
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	12	40673121	67811869	15284	0.0029
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	12	67811996	67812154	2	-2.0807
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	12	67813199	131671419	37101	1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	18348806	25207248	3457	-1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	25208367	25208666	3	-1.0357
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	25211330	45577040	13679	2e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	45577313	45580215	2	-1.6271
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	45581561	47807202	1512	0.0084
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	47809265	47809391	6	-0.6948
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	47815440	67169039	8886	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	67173994	67177516	2	-1.381
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	67178518	73099599	3507	-0.0062
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	73100001	73110657	9	-1.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	73119189	114005560	25570	4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	14	19571208	45591943	13186	0.0015
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	14	45638265	45724199	43	-0.9445
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	14	45725706	105059083	36195	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	15	21238778	99701830	44502	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	16	593460	87907437	40848	-3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	17	933971	78510305	36969	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	18	319586	69566909	39023	-1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	18	69567972	69598084	25	0.5871
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	18	69761923	75210228	3600	-0.0028
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	19	235018	63570038	23932	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	20	403764	15909689	9678	-0.0029
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	20	15913919	15916880	3	-1.6179
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	20	15916990	61690281	27581	-0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	21	14269492	46503202	20571	-0.0018
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	22	15803930	42494726	13093	-6e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	22	42495826	42499017	5	-0.7677
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	22	42500227	47717016	3819	-0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	3167107	86313452	33194	0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	86313544	86328031	22	-0.6314
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	86328084	86700997	243	-0.0347
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	86701041	86704276	4	-1.2971
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	86709569	91339012	1445	0.0107
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	91339552	91339682	2	-1.6159
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	91340797	101292024	4248	0.0061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	101292220	101294377	2	-1.7669
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	101298690	105116281	1702	-6e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	105116330	105142486	17	-0.5806
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	105143901	116504599	5140	0.007
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	116504721	116505161	3	-1.4945
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	116505384	116741075	142	-0.0031
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	116741544	116745252	19	-1.0336
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	116745652	154558783	17165	0.0053
