Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	1	3218610	168571831	79140	0.0046
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	1	168573174	168574698	4	-1.0098
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	1	168580092	238855281	44666	0.0032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	1	238855638	238856094	3	-1.4523
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	1	238862449	247813706	5253	-3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	484222	36533822	21380	0.0055
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	36534484	36541348	3	-1.231
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	36545169	178763911	73850	0.0053
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	178767957	178768683	3	1.2275
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	2	178770301	242476062	36004	0.0058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	3	2212571	197538677	106317	-1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	4	1053934	73744235	39572	0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	4	73744249	74063676	179	0.5603
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	4	74078452	139604851	36405	0
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	4	139605006	139606642	2	-1.5261
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	4	139608671	188763651	26555	0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	5	914233	66637771	35719	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	5	66638902	66648422	8	-0.9557
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	5	66651843	180360469	64759	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	6	1014281	69502611	37700	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	6	69503064	69503234	4	-0.95
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	6	69503366	170903919	58758	2e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	7	705284	158385118	81295	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	617667	31921721	18681	8e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	31922173	31922687	2	-1.4308
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	31925511	64340081	15789	0.0015
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	64340262	64340597	2	-1.5578
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	64348293	82378106	10276	0.0026
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	82378129	82378135	2	-1.2649
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	8	82379647	145232496	36765	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	9	789932	140938752	67973	-0.0031
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	10	415240	3507303	1598	0.0084
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	10	3507739	3508004	2	-1.2919
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	10	3511957	14252605	8372	0.0085
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	10	14253132	14255042	2	-1.4097
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	10	14255663	135225087	70844	0.0067
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	11	456120	134142530	77207	0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	12	889902	42366867	21513	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	12	42375295	42383046	10	-1.1449
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	12	42386854	69525602	15283	0.0029
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	12	69525729	69525887	2	-2.0807
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	12	69526932	133161346	37101	1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	19450806	26309248	3457	-1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	26310367	26310666	3	-1.0357
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	26313330	46679039	13677	2e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	46679312	46682214	2	-1.6271
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	46683560	48909201	1512	0.0081
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	48911264	48911390	6	-0.6948
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	48917439	68271038	8885	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	68275993	68279515	2	-1.381
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	68280517	74201598	3507	-0.0062
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	74202000	74212656	9	-1.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	13	74221188	114987458	25569	4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	14	20501368	46522193	13186	0.0014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	14	46568515	46654449	43	-0.9445
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	14	46655956	105988038	36193	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	15	23687685	101884307	44500	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	16	653459	89379936	40782	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	17	987221	80917016	36969	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	18	329586	71415929	39020	-1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	18	71416992	71447104	25	0.5871
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	18	71610943	77109240	3600	-0.0028
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	19	284018	58878226	23932	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	20	455764	15961689	9681	-0.0029
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	20	15965919	15968880	3	-1.6179
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	20	15968990	62219837	27581	-0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	21	15347621	47678774	20570	-0.0018
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	22	17423930	44163393	13092	-6e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	22	44164493	44167684	5	-0.7677
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	22	44168894	49331012	3819	-0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	3157107	86426796	33204	0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	86426888	86441375	22	-0.6314
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	86441428	86814341	243	-0.0347
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	86814385	86817620	4	-1.2971
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	86822913	91452356	1445	0.0107
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	91452896	91453026	2	-1.6159
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	91454141	101405368	4252	0.0061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	101405564	101407721	2	-1.7669
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	101412034	105229625	1703	-7e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	105229674	105255830	17	-0.5806
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	105257245	116620571	5143	0.0071
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	116620693	116621133	3	-1.4945
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	116621356	116857047	142	-0.0031
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	116857516	116861224	19	-1.0336
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C02_1438604	X	116861624	154905589	17164	0.0054
