Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	1	3208470	179014940	86570	0.0055
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	1	179017196	179020106	4	-1.1376
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	1	179022284	245880329	42365	9e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	474222	45607465	26798	0.0057
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	45612531	45612558	2	-2.2346
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	45617923	165560134	60288	0.0058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	165562220	165572295	5	-0.9719
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	165573685	242124735	44104	0.005
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	3	526235	199023074	106291	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	4	1043934	28925172	17666	-0.0036
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	4	28927337	28927347	2	-2.4484
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	4	28927363	61009907	15837	1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	4	61012589	61014212	2	2.1731
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	4	61018159	189836143	69155	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	5	967233	2831911	875	0.0066
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	5	2835365	2835508	2	-1.0505
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	5	2835715	8328773	4370	0.0102
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	5	8329259	8329276	2	-1.3178
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	5	8331166	180293075	95178	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	6	959281	170745844	96403	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	7	671810	158077879	81259	-1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	8	607667	19633393	10346	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	8	19634292	19635100	6	-1.2776
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	8	19635482	25952363	4313	0.0014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	8	25960305	25960405	2	-1.8567
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	8	25960681	145304484	66808	8e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	9	779932	140058573	67935	-0.005
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	10	405240	135075077	80802	0.0122
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	11	446120	8168818	4048	-0.0053
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	11	8169120	8174047	2	-1.3949
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	11	8175019	132070092	72471	0.0024
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	11	132071297	132071379	2	-1.9008
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	11	132073239	133647740	667	-0.0029
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	12	760163	40098205	21105	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	12	40102146	40102162	2	-1.6374
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	12	40102412	70213868	17177	-0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	12	70217582	70217626	2	-1.5112
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	12	70217841	131671419	35598	3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	13	18348806	114005560	56608	0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	14	19571208	19980895	268	-0.0153
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	14	19981057	19983132	2	-1.4469
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	14	19983547	79174130	33512	0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	14	79182423	79187069	3	-1.0792
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	14	79191945	105059083	15613	8e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	15	21238778	99701830	44500	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	16	593460	87907437	40826	0.0036
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	17	933971	52915529	24128	0.0013
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	17	52917150	52917227	2	-1.3254
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	17	52919210	72508985	10402	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	17	72509047	72509669	2	-1.4594
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	17	72517853	78510305	2417	-0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	18	319586	75210228	42639	0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	19	235018	21502795	7886	-0.0094
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	19	21509143	21513514	2	-1.9847
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	19	21514145	63570038	16035	-0.0037
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	20	403764	46551172	27288	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	20	46551183	46569301	3	-1.3029
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	20	46569408	61690281	9960	-0.0018
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	21	14269492	15507072	817	-0.0138
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	21	15510166	15515779	2	-1.3198
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	21	15516912	43255895	18416	0
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	21	43256321	43260542	2	-1.3831
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	21	43264244	46503202	1326	0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	22	15803930	47717016	16910	0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	3167107	14064822	4161	-0.0031
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	14067559	14090638	24	-0.477
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	14092957	45668084	14886	0.0064
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	45671162	45673421	3	-2.6932
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	45679433	86313452	14084	0.0016
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	86313544	86328031	21	-0.49
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	86328084	105116202	7643	0.0087
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	105116281	105142486	18	-0.693
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	105143901	147547714	20043	0.004
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	147550041	147573033	20	-0.7306
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	147619565	149380015	756	0.0151
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	149380425	149383350	2	-2.04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	149384027	154558783	1616	-0.004
