Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	1	3218610	180748317	86628	0.0056
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	1	180750573	180753483	4	-1.1376
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	1	180755661	247813706	42363	9e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	484222	45753961	26794	0.0057
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	45759027	45759054	2	-2.2346
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	45764419	165851888	60282	0.0058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	165853974	165864049	5	-0.9719
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	165865439	236723300	40766	0.0055
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	236726595	236732600	5	-0.8138
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	2	236734213	242476062	3335	4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	3	2212571	197538677	106285	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	4	1053934	29316074	17666	-0.0036
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	4	29318239	29318249	2	-2.4484
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	4	29318265	61327312	15835	1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	4	61329994	61331617	2	2.1731
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	4	61335564	188763651	69162	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	5	914233	2778911	875	0.0066
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	5	2782365	2782508	2	-1.0505
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	5	2782715	8275773	4372	0.0103
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	5	8276259	8276276	2	-1.3178
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	5	8278166	180360469	95176	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	6	1014281	170903919	96412	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	7	705284	158385118	81260	-1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	8	617667	19589113	10346	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	8	19590012	19590820	6	-1.2776
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	8	19591202	25896446	4313	0.0014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	8	25904388	25904488	2	-1.8567
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	8	25904764	145232496	66815	8e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	9	789932	140938752	67947	-0.005
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	10	415240	135225087	80800	0.0122
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	11	456120	8212242	4047	-0.0053
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	11	8212544	8217471	2	-1.3949
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	11	8218443	132564882	72462	0.0024
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	11	132566087	132566169	2	-1.9008
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	11	132568029	134142530	667	-0.0029
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	12	889902	41811938	21101	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	12	41815879	41815895	2	-1.6374
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	12	41816145	71927601	17176	-0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	12	71931315	71931359	2	-1.5112
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	12	71931574	133161346	35598	3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	13	19450806	114987458	56604	0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	14	20501368	20911055	268	-0.0153
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	14	20911217	20913292	2	-1.4469
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	14	20913707	80104377	33509	0.0026
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	14	80112670	80117316	3	-1.0792
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	14	80122192	105988038	15614	8e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	15	23687685	101884307	44498	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	16	653459	89379936	40760	0.0036
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	17	987221	55560530	24128	0.0013
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	17	55562151	55562228	2	-1.3254
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	17	55564211	74997390	10402	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	17	74997452	74998074	2	-1.4594
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	17	75006258	80917016	2417	-0.0089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	18	329586	77109240	42636	0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	19	284018	21710955	7886	-0.0094
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	19	21717303	21721674	2	-1.9847
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	19	21722305	58878226	16035	-0.0037
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	20	455764	47117765	27291	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	20	47117776	47135894	3	-1.3029
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	20	47136001	62219837	9960	-0.0018
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	21	15347621	16585201	817	-0.0138
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	21	16588295	16593908	2	-1.3198
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	21	16595041	44382826	18416	0
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	21	44383252	44387473	2	-1.3831
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	21	44391175	47678774	1325	9e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	22	17423930	49331012	16909	0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	3157107	14154901	4163	-0.003
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	14157638	14180717	24	-0.477
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	14183036	45783140	14885	0.0064
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	45786218	45788477	3	-2.6932
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	45794489	86426796	14093	0.0016
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	86426888	86441375	21	-0.49
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	86441428	105229546	7648	0.0088
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	105229625	105255830	18	-0.693
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	105257245	107407741	792	-0.0128
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	107410223	107432957	11	-0.7867
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	107433004	107510731	56	-0.0151
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	107510821	107514666	6	-1.0442
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	107516984	120316175	6251	0.0108
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	120316464	120317339	6	-1.1745
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	120318750	147740022	12923	0.0038
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	147742349	147765341	20	-0.7306
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	147811873	149629357	756	0.0151
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	149629767	149632692	2	-2.04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C04_1438636	X	149633369	154905589	1616	-0.0039
