Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	1	3208470	184557409	90307	0.0707
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	1	184561528	184564649	2	-2.0678
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	1	184568070	245880329	38721	0.0738
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	474222	17167154	10630	0.0718
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	17167437	17188754	13	-0.3441
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	17189090	19027306	1293	0.0695
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	19027320	19033548	6	-0.7892
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	19037978	61199637	23771	0.0654
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	61216987	61736900	253	-0.6614
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	61740530	63068978	644	0.0732
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	63069911	63325890	84	-0.6927
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	63326947	80866333	10054	0.0659
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	80869202	80877578	2	-1.4698
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	80880006	83683520	1417	0.061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	83684016	83690920	2	-1.1776
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	83691974	230844534	76541	0.1155
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	230847459	233128683	1013	-0.4084
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	233130449	233130481	2	-1.7466
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	233131940	236647489	2364	-0.4859
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	236648422	236651057	2	-2.6031
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	2	236651760	242124735	3178	-0.5145
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	3	526235	7227368	2479	0.0739
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	3	7230106	7261004	31	-0.6939
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	3	7264936	199023074	103843	0.0717
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	4	1043934	1722365	219	0.0553
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	4	1722378	2152080	154	-0.6296
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	4	2164887	28925172	17302	0.0567
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	4	28927337	28927347	2	-1.9868
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	4	28927363	61009907	15846	0.0604
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	4	61012589	61014212	2	1.8479
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	4	61018159	189836143	69199	0.0688
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	5	967233	114784354	61046	0.0653
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	5	114784536	114784761	5	-0.8871
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	5	114786977	136503635	12698	0.067
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	5	136505765	136512738	13	-0.7913
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	5	136516280	180293075	26734	0.0766
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	6	959281	46298256	27180	0.0703
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	6	46299677	49926539	2115	-0.5958
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	6	49927295	170745844	67163	0.0659
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	7	671810	6467488	2152	0.0651
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	7	6471699	25108721	10916	-0.7245
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	7	25110199	95441231	35544	0.075
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	7	95442487	95970763	302	-0.6341
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	7	95971467	95972051	2	-2.1489
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	7	95976768	96462193	339	-0.5746
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	7	96463696	97727620	629	0.0863
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	7	97738127	155951615	30370	-0.7098
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	7	155954363	158077879	991	0.0721
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	607667	3470039	1446	-0.7394
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	3475054	3475452	3	-2.4516
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	3475710	19631383	8888	-0.7221
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	19633393	19635100	7	-5.7207
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	19635482	26378261	4596	-0.7098
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	26379548	26379684	2	-3.1979
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	26381142	27824782	1111	-0.7232
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	27825686	27843228	12	-3.7804
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	27848756	33366227	3538	-0.7163
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	33369338	86223817	26994	0.0699
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	86223861	86224044	3	-1.1279
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	86224844	113103337	14930	0.0679
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	113104086	113128438	18	-0.9406
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	8	113129808	145304484	19939	0.0709
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	9	779932	106680607	47327	0.0725
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	9	106683766	106684071	5	-0.7771
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	9	106684108	140058573	20645	0.1272
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	405240	64641665	37372	0.0648
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	64651457	64678617	14	-0.4826
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	64680419	65975567	729	0.058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	65979073	66580493	409	-0.62
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	66588861	66733720	114	0.0386
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	66739449	67171127	263	-0.5804
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	67171166	76681125	5042	0.068
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	76687043	77279008	366	0.4769
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	77283782	79431047	1667	0.0737
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	79432184	102032684	13777	-0.5966
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	10	102039556	135075077	21072	0.0782
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	11	446120	44881147	28309	0.0756
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	11	44881216	44881502	2	-1.6689
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	11	44882291	114641818	35751	0.0725
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	11	114641924	114641939	2	-1.2525
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	11	114642457	133647740	13164	0.0855
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	760163	73221010	39872	0.0713
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	73227126	73275503	37	-0.6918
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	73281742	73450359	115	0.0554
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	73451337	73465688	15	-0.5886
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	73472179	73472581	3	-1.3958
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	73473967	73570344	62	-0.6199
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	73572970	73696065	71	0.0427
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	73696276	74204225	317	-0.6214
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	74204745	89822976	9120	0.0718
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	89824535	89827712	2	-1.7556
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	89830322	98794848	5948	0.0743
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	98796768	99434063	295	0.4973
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	99434715	130942983	17958	0.059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	130943001	130985486	12	-0.6206
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	130988671	131069034	36	0.0034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	131076604	131632817	67	-0.604
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	12	131664615	131671419	3	0.0157
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	13	18348806	38225154	12484	0.0786
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	13	38239591	56051596	9791	-0.7123
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	13	56055377	56089767	12	0.1534
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	13	56090275	56121574	8	-0.6262
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	13	56135146	57170124	270	0.0507
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	13	57174836	57195194	20	-0.8641
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	13	57199670	114005560	34041	0.0739
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	14	19571208	65130971	25228	0.0708
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	14	65152504	105059083	24181	-0.6592
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	15	21238778	61820090	22786	0.0712
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	15	61831891	62127670	202	-0.6037
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	15	62129833	98321788	20938	0.0703
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	15	98324770	99568454	495	-0.6076
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	15	99573672	99701830	88	0.0629
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	16	593460	87907437	40853	-0.036
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	17	933971	5334327	1904	0.0674
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	17	5334928	7898530	1399	-0.7184
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	17	7902885	64485524	26764	0.0603
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	17	64489201	64588164	48	-0.6945
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	17	64589068	78510305	6853	0.066
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	18	319586	25901311	13532	0.076
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	18	25901542	25904961	3	-1.7458
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	18	25906149	45656183	12201	0.0761
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	18	45656486	45657445	2	-1.136
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	18	45659801	50021464	3014	0.0727
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	18	50025565	74114251	13294	-0.7226
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	18	74125065	75210228	600	0.0646
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	19	235018	21502795	7890	0.0611
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	19	21509143	21513514	2	-2.237
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	19	21514145	38375428	4966	0.0657
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	19	38380097	39367617	677	-0.6987
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	19	39367904	63570038	10401	0.0684
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	20	403764	46551172	27301	0.0726
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	20	46551183	46569301	3	-1.1749
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	20	46569408	61690281	9965	0.0757
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	21	14269492	46503202	20577	0.0762
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	22	15803930	47717016	16928	0.0726
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	3167107	5815721	274	-0.0123
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	5816121	5824569	10	-0.7202
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	5824937	14049188	3875	0.0191
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	14050602	14088107	30	-0.4398
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	14090638	22373457	3795	0.0101
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	22374232	22378076	2	-1.6921
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	22380925	44975296	10746	0.0044
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	44975755	44976432	3	-1.6801
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	44979418	45671162	368	0.0101
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	45671990	45673421	2	-2.9143
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_C05_1438570	X	45679433	154558783	44270	0.0027
