Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	1	3218610	181377804	87108	-0.0329
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	1	181378036	181378334	2	-1.1994
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	1	181379512	247813706	41978	0.0292
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	2	484222	61562557	35812	0.1224
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	2	61578135	61661559	41	-0.6439
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	2	61671538	135455746	34203	0.1143
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	2	135459133	193319307	32776	-0.7087
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	2	193366879	242476062	28383	0.1089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	3	2212571	191280103	103819	0.2253
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	3	191284625	191284679	2	-1.6714
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	3	191284700	197538677	2524	0.1974
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	4	1053934	188763651	102733	0.1019
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	914233	7263618	4556	0.2251
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	7267057	7267949	2	-0.8973
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	7273088	25420089	10074	0.2306
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	25422694	25685980	159	-0.4734
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	25690393	54482807	13872	0.2279
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	54483248	114699817	32275	-0.8161
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	114700031	114702136	3	-2.7157
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	114702295	114875874	136	-0.8092
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	114877894	114877920	2	-3.2239
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	114882704	142527751	15711	-0.8223
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	5	142529381	180360469	23580	0.1605
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	6	1014281	43167111	25513	0.0762
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	6	43167655	43168117	2	-1.0388
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	6	43168164	123121457	42150	0.0351
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	6	123124598	123682758	333	0.5316
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	6	123683028	154835273	19793	0.0025
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	6	154839963	154845863	3	1.1144
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	6	154854713	170903919	8675	-0.0146
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	7	705284	97524030	49758	0.2051
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	7	97545241	99200084	654	-0.5789
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	7	99204231	158385118	30895	0.1878
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	8	617667	26322344	14919	-0.7392
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	8	26323631	26323767	2	-3.6151
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	8	26325225	36590950	6224	-0.7332
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	8	36592056	145232496	60338	0.6504
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	9	789932	140938752	67988	0.0859
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	10	415240	89285019	51942	0.1112
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	10	89293763	89603160	219	-0.8359
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	10	89603424	89682833	122	-0.5888
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	10	89700865	89701081	6	-1.8792
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	10	89702377	90961076	888	-0.8843
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	10	90983629	128248846	24005	-0.018
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	10	128249486	128249738	2	-1.283
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	10	128251618	135225087	3656	-0.1091
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	11	456120	134142530	77225	0.1121
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	12	889902	4924301	2229	-0.0355
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	12	4924400	4926614	3	-1.0471
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	12	4927461	39725630	17585	-0.0428
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	12	39728694	39732330	3	-0.8327
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	12	39732430	113890219	43934	-8e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	12	113890599	114176777	206	-1.1034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	12	114178439	114199397	18	-0.0515
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	12	114201648	116360864	1496	-1.1181
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	12	116368014	133161346	8421	-0.0434
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	13	19450806	24115747	2430	-0.6978
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	13	24578032	39354354	10057	0.092
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	13	39355713	40742234	1003	-0.6729
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	13	40745784	40747001	2	-2.574
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	13	40747762	43190281	1587	-0.6851
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	13	43194435	45355138	1269	0.098
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	13	45358131	77760351	17165	-0.6761
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	13	77764290	77764455	4	-2.4272
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	13	77771524	114987458	23031	-0.702
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	14	20501368	46590910	13202	-0.0281
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	14	46592058	46592177	2	-1.6509
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	14	46592900	105988038	36222	-0.0074
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	15	23687685	70034088	26261	-0.243
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	15	70035333	71437710	907	0.1066
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	15	71441890	77973012	3262	-0.1824
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	15	77978752	78410789	216	-1.143
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	15	78413065	78413526	2	-6.8162
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	15	78416049	78599729	106	-1.0439
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	15	78600568	79774363	680	-0.1367
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	15	79787835	80033014	274	-1.0684
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	15	80033499	101884307	12786	-0.0972
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	16	653459	72237078	29361	0.0741
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	16	72237535	89379936	11344	-0.9248
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	17	987221	3628362	1130	0.0345
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	17	3630446	7485673	1983	-0.8841
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	17	7499349	7591761	32	-3.1845
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	17	7593566	10531250	1731	-0.9681
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	17	10532324	80917016	32064	-0.0446
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	18	329586	63106365	35897	0.0538
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	18	63107169	66949345	1806	-0.4391
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	18	66956043	72062398	1717	0.0469
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	18	72063225	74277674	1574	0.3994
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	18	74278068	74293082	25	0.8601
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	18	74293569	77109240	1633	-0.4683
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	19	284018	29000448	9579	0.0072
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	19	29001367	30312350	1019	-0.8177
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	19	30312874	30313894	3	-2.4989
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	19	30315270	32974232	1842	-0.8096
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	19	32974686	58878226	11482	0.0352
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	20	455764	62219837	37275	0.1193
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	21	15347621	25293109	5913	0.1933
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	21	25296170	25299689	4	-0.5751
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	21	25299758	47678774	14663	0.1528
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	22	17423930	39150397	10622	0.023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	22	39157315	41066887	781	-0.8318
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	22	41069626	49156238	5418	-0.0805
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	22	49157038	49157118	2	-1.438
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	22	49157593	49331012	97	-0.1077
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	3157107	26011012	9711	0.0451
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	26011177	26016820	7	-0.7118
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	26017265	26134307	82	0.0791
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	26134435	26135497	3	-1.0114
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	26138472	30289295	2335	0.0394
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	30292317	30308744	25	-0.3882
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	30311439	120303895	35871	-0.0028
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	120303963	120322336	27	-0.5919
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	120322811	147740022	12934	-0.0101
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	147742349	147758052	11	-0.6874
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_D09_1438520	X	147758398	154905589	2389	-0.0114
