Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	1	3208470	245880329	128986	0.0073
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	2	474222	242124735	131228	0.0076
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	3	526235	154224527	83619	0.0171
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	3	154225631	154225814	2	-1.6335
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	3	154226863	159813745	2954	0.022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	3	159820459	159822235	2	-1.6975
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	3	159824316	199023074	19734	0.019
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	4	1043934	114316658	62647	0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	4	114318286	114322884	6	-1.226
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	4	114325517	130719973	9005	0.0101
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	4	130722178	130723144	10	0.5507
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	4	130723626	162000219	17158	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	4	162002630	162002980	5	-1.0008
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	4	162005553	189836143	13858	0.0057
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	967233	37290216	21444	0.0046
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	37290520	37291340	2	-1.4164
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	37294917	62076964	11806	0.0064
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	62077461	62082507	5	-0.8309
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	62083435	100279580	19472	0.01
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	100291606	100359291	33	-1.2391
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	100372165	104004374	1743	0.0126
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	104006584	104007071	4	-1.3623
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	104007160	111964823	4586	0.0075
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	111969737	111971451	3	-1.3138
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	111972645	112460454	464	-0.0075
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	112460579	112464467	3	-1.9646
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	5	112465793	180293075	40878	0.0046
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	6	959281	25055784	16854	0.006
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	6	25059178	25059788	5	-1.208
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	6	25062214	148888698	66647	0.0067
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	6	148891122	148893002	3	-1.2918
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	6	148893030	170745844	12919	0.0054
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	7	671810	158077879	81276	0.0062
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	8	607667	145304484	81501	0.0033
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	9	779932	140058573	67948	0.0112
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	10	405240	54807367	31429	-0.0677
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	10	54807451	54812107	3	-1.7187
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	10	54812169	135075077	49367	-0.08
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	11	446120	133647740	77201	0.0041
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	12	760163	17096309	9228	0.0068
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	12	17100151	17100818	2	-1.5698
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	12	17102365	24285021	4477	0.0065
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	12	24286469	24286539	3	-1.0559
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	12	24288211	50093066	12573	0.0061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	12	50094422	50094492	2	-1.291
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	12	50094494	131671419	47615	0.0031
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	13	18348806	80253932	35792	0.0033
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	13	80254467	80255253	3	-2.2696
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	13	80255672	114005560	20825	-7e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	14	19571208	28793480	4458	-0.0075
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	14	28797605	28798105	2	1.7371
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	14	28801413	32911195	2522	0
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	14	32912645	32913151	3	-1.5451
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	14	32913754	47753044	7372	-0.0063
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	14	47757601	47758497	2	-1.3566
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	14	47760075	105059083	35051	-0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	15	21238778	99701830	44494	0.0024
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	16	593460	70551038	29300	0.0046
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	16	70557258	70561900	5	-0.7874
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	16	70562322	79336207	6366	0.0103
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	16	79336577	79338853	6	0.7509
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	16	79341309	87907437	5162	0.0048
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	17	933971	78510305	36959	0.0058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	18	319586	75210228	42644	0.0024
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	19	235018	63570038	23928	0.0012
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	20	403764	37467877	21050	0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	20	37472405	37475460	3	-1.4206
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	20	37479542	61690281	16205	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	21	14269492	24507255	6194	0.0051
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	21	24510120	24510210	3	-2.2692
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	21	24510827	46503202	14379	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	22	15803930	47717016	16922	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	3167107	28299638	11050	0.0031
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	28303625	28303725	2	-3.3964
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	28304332	31645319	1790	0.0183
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	31647124	31653024	10	-0.649
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	31653226	44906128	5824	0.0041
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	44906142	44906289	2	-2.5477
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	44906878	86313452	14509	0.0057
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	86313544	86335610	27	-0.5448
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	86335627	111947759	10805	-0.0032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	111948378	111959821	5	-1.1447
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	111959849	145306093	15543	0.0013
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	145307462	145315388	19	-0.4948
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_E04_1438666	X	145316815	154558783	3724	0.0073
