Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	1	3208470	245880329	129021	0.0022
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	2	474222	47610755	28293	0.006
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	2	47616523	47616873	2	-2.5443
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	2	47617399	86062607	21264	0.0096
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	2	86063682	86068611	6	-1.0296
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	2	86069171	88372029	474	0.0034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	2	88372117	88380008	4	-1.5073
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	2	88392278	242124735	81224	0.0068
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	3	526235	199023074	106335	0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	4	1043934	189836143	102709	0.0037
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	5	967233	11862016	7807	0.0032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	5	11862895	11867380	5	-1.5537
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	5	11869337	107066250	48255	0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	5	107066713	107066959	2	-2.3484
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	5	107067830	173572803	41101	4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	5	173573315	173574101	5	-1.2347
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	5	173578620	180293075	3301	0.0014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	6	959281	66076629	35635	0.0023
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	6	66080225	66084350	5	-1.1968
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	6	66087172	160822780	55852	0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	6	160823612	160826430	3	-1.9652
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	6	160827124	162056149	888	-0.014
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	6	162056382	162056753	3	-1.3766
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	6	162057502	170745844	4063	0.0037
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	7	671810	67570454	35022	0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	7	67571416	67572346	3	-1.8813
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	7	67574800	75275621	3114	0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	7	75276699	75276716	2	-1.9558
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	7	75277632	155400278	41760	0.0024
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	7	155400301	155400311	2	-2.8418
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	7	155400325	157413993	1175	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	7	157414564	157417240	3	-1.3637
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	7	157420053	158077879	215	0.019
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	8	607667	145304484	81513	0.0021
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	9	779932	140058573	67965	-0.0018
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	10	405240	25513963	17501	0.0091
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	10	25518330	25528745	13	-1.0406
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	10	25536159	135075077	63322	0.0079
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	11	446120	133647740	77223	6e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	12	760163	84893483	46972	0.0019
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	12	84895801	84902994	4	-1.3348
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	12	84906215	131671419	26948	0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	13	18348806	114005560	56630	0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	14	19571208	98634149	46459	0.0053
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	14	98634282	98634296	2	-2.6456
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	14	98634529	101790381	1753	-0.0044
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	14	101793346	101795820	2	-1.2353
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	14	101797603	105059083	1210	-4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	15	21238778	99701830	44508	6e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	16	593460	79454020	35794	9e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	16	79516988	79546521	26	-0.9402
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	16	79546640	87907437	5027	0.0093
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	17	933971	10699995	5025	0.0051
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	17	10702925	10706596	7	-1.0224
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	17	10707855	19804402	4187	0.0025
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	17	19805023	19805379	2	-2.0044
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	17	19806393	78510305	27748	0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	18	319586	2249283	639	0.0041
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	18	2252563	2257342	8	-0.8279
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	18	2258254	11987197	6283	0.0031
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	18	11988734	11991707	6	-0.9626
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	18	11993320	75210228	35720	0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	19	235018	35976646	11254	0.0054
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	19	35979958	35980380	2	-1.865
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	19	35982439	63570038	12679	-0.0013
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	20	403764	1906428	877	-0.0043
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	20	1907064	1907573	2	-1.6875
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	20	1908226	61690281	36388	0.0019
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	21	14269492	18482896	2606	4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	21	18483197	18483509	4	-1.243
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	21	18489596	21693979	2117	0.0033
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	21	21695648	21706609	3	-2.0398
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	21	21706795	40594043	12435	0.0025
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	21	40594784	40608009	10	-0.5348
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	21	40610253	46503202	3401	0.0033
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	22	15803930	47717016	16925	0.0066
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	X	3167107	22188470	7782	0.0103
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	X	22188979	22197594	16	-0.8168
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	X	22198587	111877433	36191	0.0056
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	X	111881518	111884033	3	-3.2614
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	X	111886724	120143856	4002	0.0085
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	X	120144145	120145020	6	-1.2898
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	X	120146431	150933938	14673	0.0151
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	X	150934345	150946608	5	-1.4775
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F02_1438534	X	150949400	154558783	657	0.0365
