Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	3208470	27476148	12883	0.0375
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	27476632	29742565	957	-0.2059
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	29742967	29988299	148	0.0295
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	29991223	29992011	2	-1.0882
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	29993490	47153023	9200	0.0407
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	47158170	48842491	1039	-0.2183
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	48845123	232518037	96395	0.0358
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	232519532	232704199	144	-0.2002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	232704412	245880329	8212	0.0314
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	2	474222	196226570	103853	0.0476
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	2	196229247	197416957	684	-0.2189
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	2	197418371	219091365	12784	0.0548
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	2	219095249	241951666	13790	-0.2424
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	2	241953724	242124735	103	0.0419
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	526235	3570581	814	0.0433
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	3571937	3853883	264	-0.2166
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	3854365	6985587	1218	0.0538
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	6985717	8665221	1378	-0.2378
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	8675126	102359033	50906	0.0494
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	102363195	103037093	311	-0.2034
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	103039236	103342576	196	0.0588
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	103349185	103421067	36	-0.2002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	103427052	109038156	3231	0.0556
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	109043014	115185174	3391	-0.2217
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	115188778	119285333	2735	0.0327
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	119285585	119286264	2	-0.8944
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	119286844	123067836	1914	0.0303
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	123068322	123070616	2	-0.9739
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	123074842	124192662	666	0.035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	124193507	199023074	39264	0.2733
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	4	1043934	19927801	11814	0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	4	19927935	38021491	11282	-0.2463
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	4	38022282	111226106	37715	-0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	4	111226109	111226191	3	-0.9753
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	4	111226234	189836143	41855	-0.0113
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	5	967233	52433762	27318	0.0375
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	5	52451960	53797213	804	-0.2541
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	5	53798742	115250885	33184	0.0122
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	5	115480044	121939758	3777	-0.2268
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	5	121940339	180293075	35368	0.016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	6	959281	170745844	96418	-0.1189
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	7	671810	111629490	56693	0.0441
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	7	111629824	111630666	2	-1.1761
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	7	111630866	158077879	24579	0.051
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	607667	6812480	3099	0.0205
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	6812628	14865848	3709	-0.2452
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	14866475	15008353	144	0.0264
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	15012434	30623466	10832	-0.2489
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	30625636	78552776	24805	0.0432
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	78553592	78556704	2	-1.1125
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	78560880	82927377	2339	0.0478
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	82933045	96919800	7719	-0.222
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	96931910	111041846	7863	0.0427
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	111045794	116120562	2483	-0.2108
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	116123468	116193867	52	0.041
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	116194612	117925927	1032	-0.2261
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	117926674	129795522	8165	0.0466
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	129795566	132625311	1874	-0.2203
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	132657748	132879418	147	0.0706
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	132881810	132980381	62	-0.2105
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	132982179	145304484	7149	0.0446
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	9	779932	32944680	19809	-0.2145
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	9	32946913	38737688	3492	0.6349
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	9	70228864	107067525	24338	0.0389
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	9	107071992	107149437	55	-0.2396
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	9	107149545	140058573	20241	0.0379
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	405240	52149022	29538	0.0511
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	52149778	54312216	1584	-0.2094
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	54312301	58481662	2084	0.0676
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	58481878	60136809	1065	-0.2218
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	60140709	60287329	85	0.046
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	60287716	60676416	296	-0.2246
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	60676451	89176975	17246	0.0518
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	89177103	89607137	240	-0.2225
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	89607381	89618551	14	0.1332
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	89618903	89664090	62	-0.2404
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	89664115	90177904	432	-0.5185
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	90183111	97844987	4437	-0.2121
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	97845333	108371247	6211	0.048
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	108371398	112861647	2866	-0.21
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	112862189	135075077	14638	0.0485
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	11	446120	133647740	77197	0.0404
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	760163	10007633	4956	0.0336
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	10008676	11875016	989	-0.2242
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	11876841	11936376	95	-0.0346
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	11936398	13328535	726	-0.2249
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	13328671	19331688	3805	0.0441
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	19338878	20043006	441	-0.2477
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	20044473	20383351	197	0.0673
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	20384150	20477907	65	-0.1977
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	20478088	31142829	7008	0.0389
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	31303936	32845036	966	-0.213
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	32846014	32991027	87	0.0362
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	32995423	33072493	55	-0.1972
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	33073406	130441767	54104	0.0338
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	130441936	130452024	3	-1.1292
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	130457651	131671419	404	-0.0094
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	13	18348806	49152134	19505	-0.0148
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	13	49152286	49344867	81	-0.2731
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	13	49348796	114005560	37044	-0.0176
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	14	19571208	45660660	13195	0.0505
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	14	45661808	45661927	2	-1.1416
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	14	45662650	58679398	8128	0.0515
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	14	58683704	105059083	28075	-0.2404
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	15	21238778	59565130	21144	0.0057
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	15	59569160	60155978	435	-0.2583
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	15	60159530	99701830	22934	0.0038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	16	593460	87907437	40836	0.0108
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	933971	7108846	2979	-0.2115
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	7112734	7113355	2	-1.7712
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	7113545	37841195	13578	-0.2313
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	37849013	46960929	3548	0.0413
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	46962418	52694058	3833	-0.2119
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	52695440	52700101	2	-1.3888
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	52700125	52711924	17	-0.2516
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	52712433	53090347	277	0.0346
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	53091903	53122922	26	-0.2013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	53128847	58062683	2350	0.0587
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	58066739	58308431	118	-0.1634
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	58309511	58358295	30	0.0447
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	58358942	70377730	6881	-0.2116
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	70378870	71067889	291	0.0366
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	71072914	77252002	2593	-0.2336
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	77252616	78510305	418	0.0491
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	18	319586	22269428	11305	0.0228
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	18	22269648	22271922	2	-1.2249
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	18	22273145	75210228	31333	0.0171
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	19	235018	63570038	23924	0.046
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	20	403764	61690281	37235	0.0488
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	21	14269492	30601897	10467	0.0366
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	21	30602356	30605406	2	-1.3165
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	21	30605673	38801310	5362	0.0387
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	21	38803718	41789060	2347	-0.2601
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	21	41789299	46503202	2389	0.0216
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	22	15803930	47717016	16908	0.0353
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	X	3167107	154558783	63037	0.0024
