Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	3218610	27603561	12881	0.0375
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	27604045	29869978	957	-0.2059
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	29870380	30215712	148	0.0295
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	30218636	30219424	2	-1.0882
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	30220903	47380436	9200	0.0407
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	47385583	49069904	1039	-0.2183
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	49072536	234451414	96454	0.0358
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	234452909	234637576	144	-0.2002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	1	234637789	247813706	8211	0.0314
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	2	484222	196518325	103844	0.0476
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	2	196521002	197708712	684	-0.2189
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	2	197710126	219383121	12784	0.0548
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	2	219387005	242302993	13791	-0.2423
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	2	242305051	242476062	103	0.0419
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	2212571	3595581	813	0.043
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	3596937	3878883	264	-0.2166
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	3879365	7010587	1218	0.0538
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	7010717	8690221	1378	-0.2378
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	8700126	100876343	50901	0.0494
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	100880505	101554403	311	-0.2034
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	101556546	101859886	195	0.0582
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	101866495	101938377	36	-0.2002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	101944362	107555466	3233	0.0556
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	107560324	113702484	3391	-0.2217
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	113706088	121585146	4651	0.0313
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	121585632	121587926	2	-0.9739
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	121592152	122709972	666	0.035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	3	122710817	197538677	39263	0.2733
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	4	1053934	20318703	11814	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	4	20318837	38345096	11282	-0.2462
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	4	38345887	111006657	37716	-0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	4	111006660	111006742	3	-0.9753
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	4	111006785	188763651	41859	-0.0112
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	5	914233	52398005	27318	0.0375
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	5	52416203	53761456	804	-0.2541
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	5	53762985	115222986	33184	0.0122
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	5	115452145	121911859	3777	-0.2268
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	5	121912440	180360469	35368	0.016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	6	1014281	170903919	96427	-0.1189
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	7	705284	111842254	56694	0.0441
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	7	111842588	111843430	2	-1.1761
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	7	111843630	158385118	24579	0.051
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	617667	6825070	3100	0.0205
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	6825218	14821477	3708	-0.2453
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	14822104	14963982	144	0.0264
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	14968063	30503924	10832	-0.2489
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	30506094	82764822	27150	0.0434
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	82770490	96850624	7718	-0.222
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	96862734	110972670	7866	0.0426
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	110976618	116051386	2485	-0.2108
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	116054292	116124691	52	0.041
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	116125436	117856746	1032	-0.2261
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	117857493	129726340	8164	0.0466
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	129726384	132556129	1874	-0.2203
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	132588566	132810236	147	0.0706
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	132812628	132911199	62	-0.2105
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	8	132912997	145232496	7149	0.0446
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	9	789932	32954680	19813	-0.2144
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	9	32956913	38747688	3494	0.6345
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	9	71039044	108027704	24340	0.0389
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	9	108032171	108109616	55	-0.2396
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	9	108109724	140938752	20245	0.0379
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	415240	52479016	29538	0.0511
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	52479772	54642210	1584	-0.2094
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	54642295	58811656	2085	0.0675
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	58811872	60466803	1065	-0.2218
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	60470703	60617323	85	0.046
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	60617710	61006410	296	-0.2246
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	61006445	89186995	17245	0.0518
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	89187123	89617157	240	-0.2225
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	89617401	89628571	14	0.1332
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	89628923	89674110	62	-0.2404
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	89674135	90187924	432	-0.5185
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	90193131	97854997	4435	-0.2121
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	97855343	108381257	6211	0.048
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	108381408	112871657	2866	-0.21
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	10	112872199	135225087	14638	0.0485
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	11	456120	134142530	77187	0.0404
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	889902	10116366	4955	0.0337
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	10117409	11983749	988	-0.2238
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	11985574	12045109	95	-0.0346
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	12045131	13437268	726	-0.2249
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	13437404	19440421	3804	0.044
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	19447611	20151739	441	-0.2477
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	20153206	20492084	197	0.0673
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	20492883	20586640	65	-0.1977
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	20586821	31251562	7008	0.0389
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	31412669	32953769	966	-0.213
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	32954747	33099760	87	0.0362
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	33104156	33181226	55	-0.1972
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	33182139	131875814	54102	0.0338
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	131875983	131886071	3	-1.1292
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	12	131891698	133161346	404	-0.0094
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	13	19450806	50254133	19503	-0.0148
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	13	50254285	50446866	81	-0.2731
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	13	50450795	114987458	37042	-0.0176
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	14	20501368	46590910	13195	0.0505
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	14	46592058	46592177	2	-1.1416
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	14	46592900	59609645	8126	0.0515
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	14	59613951	105988038	28075	-0.2404
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	15	23687685	61777838	21143	0.0057
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	15	61781868	62368686	435	-0.2583
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	15	62372238	101884307	22933	0.0038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	16	653459	89379936	40770	0.0107
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	987221	7168122	2979	-0.2115
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	7172010	7172631	2	-1.7712
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	7172821	40587669	13576	-0.2313
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	40595487	49605930	3550	0.0411
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	49607419	55339059	3833	-0.2116
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	55340441	55345102	2	-1.3888
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	55345126	55356925	17	-0.2516
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	55357434	55735348	277	0.0346
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	55736904	55767923	26	-0.2013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	55773848	60708951	2350	0.0587
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	60713007	60954699	118	-0.1634
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	60955779	61004563	30	0.0447
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	61005210	70872117	6150	-0.2098
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	70872207	70872697	2	-1.375
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	70872923	72866135	729	-0.2233
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	72867275	73556294	291	0.0366
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	73561319	79641597	2593	-0.2336
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	17	79642211	80917016	418	0.0491
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	18	329586	24015430	11305	0.0228
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	18	24015650	24017924	2	-1.2249
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	18	24019147	77109240	31330	0.0171
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	19	284018	58878226	23924	0.046
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	20	455764	62219837	37238	0.0488
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	21	15347621	31680026	10468	0.0366
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	21	31680485	31683535	2	-1.3165
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	21	31683802	39879440	5362	0.0387
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	21	39881848	42867190	2346	-0.2602
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	21	42867429	47678774	2388	0.0215
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	22	17423930	49331012	16907	0.0353
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G03_1439002	X	3157107	154905589	63054	0.0025
