Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	1	3208470	63909535	33771	0.0241
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	1	63911000	64469559	403	-0.2662
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	1	64469572	245880329	94768	0.0214
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	2	474222	159637322	83757	0.0119
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	2	159637677	159637832	2	-1.2132
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	2	159639006	168910911	5341	0.0196
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	2	168912969	168913118	2	-1.1189
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	2	168913149	242124735	42085	0.0186
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	526235	42652840	24138	0.025
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	42652918	42656504	2	-1.1794
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	42659070	72234685	17278	0.0231
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	72235353	72642792	343	-0.2799
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	72645804	191001005	60844	0.0219
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	191004952	191007790	2	-1.2863
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	191007795	199023074	3693	0.0287
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	4	1043934	189836143	102658	0.024
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	5	967233	55462146	29099	0.0237
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	5	55465218	55467361	2	0.9571
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	5	55467662	180293075	71317	0.0186
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	959281	17170845	11398	-0.2724
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	17170882	34223086	8509	0.0253
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	34229267	34305393	17	0.4144
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	34306996	116385823	44200	0.0224
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	116394594	116583314	103	-0.3258
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	116584101	117126165	282	0.0049
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	117126249	119670326	1152	-0.3026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	119670487	124167407	2486	0.0255
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	124172701	126216878	1358	-0.3068
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	126233426	128210823	1018	0.0405
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	128212436	128581325	214	-0.3181
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	128584627	128768035	113	0.0243
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	128772588	129791739	665	-0.2993
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	129792210	130724880	683	0.0137
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	130725578	131050823	213	-0.2826
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	131053661	135812394	3229	0.0331
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	135819473	136620348	553	-0.2639
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	136620603	147244783	6111	0.0201
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	147245004	170745844	14079	-0.273
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	7	671810	3067364	807	0.0234
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	7	3067805	3476495	225	-0.2757
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	7	3480776	132927064	67048	0.0205
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	7	132930241	133084269	100	-0.2725
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	7	133091218	158077879	13075	0.0221
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	607667	22260157	12341	-0.2995
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	22440088	22527769	40	-0.6954
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	22527996	22528895	2	-1.956
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	22530611	22898697	246	-0.7384
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	22898779	56838137	17128	-0.2958
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	56842339	145304484	51688	0.0199
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	9	779932	140058573	67932	0.0221
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	405240	66850127	38699	0.0248
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	66852262	66856978	6	-0.7167
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	66863361	86785792	11832	0.0385
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	86786607	89433779	1464	-0.2426
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	89433967	89601601	117	-0.6727
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	89601858	89706806	154	-0.4593
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	89706925	90570124	579	-0.6567
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	90570237	97343025	3973	-0.248
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	97344948	105222781	4355	0.0414
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	105223084	105987094	473	-0.2412
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	105988009	135075077	19120	0.0519
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	446120	78697824	41627	0.0231
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	78697937	79671534	751	-0.2664
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	79678266	79878927	189	0.0239
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	79880524	80619985	519	-0.2769
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	80625973	81159474	334	0.0058
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	81162396	81909988	475	-0.2558
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	81910489	83741948	1032	0.011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	83745645	84719554	461	-0.2593
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	84720049	133647740	31786	0.0265
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	760163	5075191	2526	0.0331
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	5075660	5923170	764	-0.3001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	5927055	12926987	3388	0.0098
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	12929562	14893772	1219	-0.2906
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	14893936	15966451	605	0.0321
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	15966899	16633654	476	-0.3116
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	16633981	16856944	135	0.0272
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	16857260	19528007	1499	-0.2905
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	19572212	20409894	617	0.038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	20415018	22618644	1343	-0.291
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	22619908	22720322	56	0.011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	22724473	25625516	1923	-0.2849
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	25628626	30030310	2834	0.0225
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	30034399	30262984	225	-0.2348
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	30264271	58043390	13114	0.0222
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	58043812	59818217	1001	-0.2928
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	59821452	62518349	1583	0.0262
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	62518583	63977797	816	-0.2868
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	63981188	64501451	310	0.0231
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	64501559	64607140	48	-0.252
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	64608916	73561379	5590	0.0346
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	73564620	73950922	251	-0.3011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	73952806	76867775	1835	0.029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	76869866	78641787	1072	-0.3014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	78662869	79386217	436	0.0471
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	79386993	81254402	1175	-0.3027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	81256937	103352177	13521	0.0227
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	103354292	103354726	2	-1.2386
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	103354756	131671419	15518	0.0142
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	13	18348806	72233022	30459	0.0201
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	13	72235019	72744693	312	-0.2154
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	13	72745515	114005560	25849	0.0234
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	14	19571208	105059083	49398	0.0149
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	21238778	24517062	1892	0.0218
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	24517728	24585178	40	-0.3627
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	24588200	50338189	12896	0.0265
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	50339192	50408612	56	-0.3672
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	50409581	59533232	6230	0.0232
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	59539198	59670169	126	0.4412
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	59671202	99701830	23265	0.0239
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	593460	48685734	15882	0.0255
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	48686955	49787057	694	-0.2488
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	49790983	49957763	124	0.011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	49959005	50700706	583	-0.2625
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	50704566	50995863	198	0.0326
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	50996161	51809320	586	-0.2671
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	51812128	52474746	531	0.023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	52476148	53105644	490	-0.2679
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	53105873	53502567	337	0.0303
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	53503632	53774599	182	-0.2895
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	53774819	53902722	121	0.0376
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	53903153	54806434	657	-0.2775
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	54809394	70485566	8873	0.022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	70486351	87907437	11540	-0.2985
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	933971	7049616	2966	0.0226
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	7050134	8314980	516	-0.2604
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	8316151	52286603	20176	0.0223
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	52287065	52293000	2	-1.107
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	52293014	52694058	279	0.0356
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	52695440	52700101	2	-1.0177
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	52700125	78510305	13001	0.0205
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	18	319586	75210228	42633	0.0254
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	19	235018	63570038	23924	0.0151
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	403764	12960737	7991	0.025
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	12961018	12970401	12	-0.3668
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	12970447	17504100	3117	0.0278
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	17506523	17532333	20	-0.3222
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	17533552	42456355	13348	0.0172
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	42458577	42723085	143	-0.2952
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	42723255	61076214	12439	0.023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	61081845	61084309	2	-2.6567
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	61084618	61690281	152	0.0143
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	14269492	32229430	11401	0.028
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	32233518	32567410	228	-0.2801
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	32577607	32704612	92	0.012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	32704758	32789707	67	-0.2807
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	32790478	38917896	4136	0.0208
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	38919411	41797274	2271	-0.2951
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	41798270	46503202	2364	0.0209
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	22	15803930	43015372	13577	0.0205
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	22	43020505	43020570	2	-1.4178
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	22	43023145	47717016	3327	0.0246
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	X	3167107	154558783	62930	0.0031
