Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	1	3218610	64136947	33768	0.0239
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	1	64138412	64696971	403	-0.2662
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	1	64696984	247813706	94825	0.0214
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	2	484222	159929076	83746	0.0119
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	2	159929431	159929586	2	-1.2132
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	2	159930760	169202665	5342	0.0196
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	2	169204723	169204872	2	-1.1189
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	2	169204903	242476062	42087	0.0186
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	2212571	42677836	24137	0.025
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	42677914	42681500	2	-1.1794
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	42684066	72151995	17278	0.0231
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	72152663	72560102	343	-0.2799
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	72563114	189518311	60839	0.0219
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	189522258	189525096	2	-1.2863
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	3	189525101	197538677	3693	0.0287
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	4	1053934	188763651	102663	0.024
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	5	914233	55426389	29099	0.0237
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	5	55429461	55431604	2	0.9571
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	5	55431905	180360469	71317	0.0186
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	1014281	17062866	11399	-0.2724
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	17062903	34115108	8509	0.0253
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	34121289	34197415	17	0.4144
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	34199018	116279130	44203	0.0224
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	116287901	116476621	103	-0.3258
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	116477408	117019472	282	0.0049
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	117019556	119628627	1153	-0.302
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	119628788	124125708	2487	0.0255
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	124131002	126175185	1358	-0.3068
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	126191733	128169130	1018	0.0405
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	128170743	128539632	214	-0.3181
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	128542934	128726342	113	0.0243
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	128730895	129750046	666	-0.2984
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	129750517	130683187	683	0.0137
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	130683885	131009130	213	-0.2826
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	131011968	135770701	3229	0.0331
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	135777780	136578655	553	-0.2639
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	136578910	147203090	6113	0.0201
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	6	147203311	170903919	14079	-0.273
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	7	705284	3100838	807	0.0234
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	7	3101279	3509969	225	-0.2757
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	7	3514250	133276524	67051	0.0205
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	7	133279701	133433729	100	-0.2725
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	7	133440678	158385118	13073	0.0221
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	617667	22204212	12341	-0.2995
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	22384143	22471824	40	-0.6954
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	22472051	22472950	2	-1.956
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	22474666	22842752	246	-0.7384
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	22842834	56675583	17128	-0.2958
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	8	56679785	145232496	51695	0.0199
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	9	789932	140938752	67944	0.0221
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	415240	67180121	38699	0.0248
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	67182256	67186972	6	-0.7167
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	67193355	86795812	11833	0.0385
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	86796627	89443799	1463	-0.2426
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	89443987	89611621	117	-0.6727
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	89611878	89716826	154	-0.4593
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	89716945	90580144	579	-0.6567
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	90580257	97353035	3971	-0.2478
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	97354958	105232791	4355	0.0414
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	105233094	105997104	473	-0.2412
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	10	105998019	135225087	19120	0.0519
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	456120	79020176	41624	0.0231
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	79020289	79993886	751	-0.2664
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	80000618	80201279	189	0.0239
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	80202876	80942337	519	-0.2769
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	80948325	81481826	333	0.0058
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	81484748	82232340	475	-0.2558
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	82232841	84064300	1032	0.011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	84067997	85041906	461	-0.2593
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	11	85042401	134142530	31780	0.0266
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	889902	5204930	2526	0.0331
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	5205399	6052909	764	-0.3001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	6056794	13035720	3386	0.0097
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	13038295	15002505	1219	-0.2906
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	15002669	16075184	605	0.0321
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	16075632	16742387	476	-0.3116
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	16742714	16965677	135	0.0272
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	16965993	19636740	1498	-0.2904
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	19680945	20518627	617	0.038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	20523751	22727377	1343	-0.291
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	22728641	22829055	56	0.011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	22833206	24274378	977	-0.2913
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	24276034	24276077	2	-1.4108
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	24276792	25734249	944	-0.276
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	25737359	30139043	2834	0.0225
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	30143132	30371717	225	-0.2348
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	30373004	59757123	13112	0.0222
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	59757545	61531950	1001	-0.2928
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	61535185	64232082	1583	0.0262
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	64232316	65691530	816	-0.2868
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	65694921	66215184	310	0.0231
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	66215292	66320873	48	-0.252
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	66322649	75275112	5590	0.0346
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	75278353	75664655	251	-0.3011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	75666539	78343644	1835	0.029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	78345735	80117656	1072	-0.3014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	80138738	80862086	436	0.0471
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	80862862	82730271	1176	-0.3023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	82732806	104828047	13521	0.0227
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	104830162	104830596	2	-1.2386
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	12	104830626	133161346	15517	0.0142
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	13	19450806	73335021	30456	0.02
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	13	73337018	73846692	312	-0.2154
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	13	73847514	114987458	25848	0.0234
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	14	20501368	105988038	49396	0.0149
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	23687685	26965969	1893	0.0219
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	26966635	27034085	40	-0.3627
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	27037107	52550897	12896	0.0264
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	52551900	52621320	56	-0.3672
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	52622289	61745940	6228	0.0232
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	61751906	61882877	126	0.4412
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	15	61883910	101884307	23264	0.0239
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	653459	50128233	15882	0.0255
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	50129454	51229556	694	-0.2488
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	51233482	51400262	124	0.011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	51401504	52143205	583	-0.2625
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	52147065	52438362	198	0.0326
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	52438660	53251819	586	-0.2671
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	53254627	53917245	531	0.023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	53918647	54548143	490	-0.2679
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	54548372	54945066	337	0.0303
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	54946131	55217098	182	-0.2895
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	55217318	55345221	121	0.0376
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	55345652	56248933	657	-0.2775
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	56251893	71928065	8809	0.0217
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	16	71928850	89379936	11540	-0.2985
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	987221	7108892	2966	0.0226
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	7109410	8374255	516	-0.2604
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	8375426	54931604	20176	0.0223
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	54932066	54938001	2	-1.107
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	54938015	55339059	279	0.0356
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	55340441	55345102	2	-1.0177
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	17	55345126	80917016	13001	0.0205
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	18	329586	77109240	42630	0.0254
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	19	284018	58878226	23924	0.0151
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	455764	13012737	7994	0.025
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	13013018	13022401	12	-0.3668
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	13022447	17556100	3117	0.0278
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	17558523	17584333	20	-0.3222
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	17585552	43022941	13348	0.0172
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	43025163	43289671	143	-0.2952
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	43289841	61605769	12439	0.023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	61611400	61613864	2	-2.6567
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	20	61614173	62219837	152	0.0143
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	15347621	33307559	11402	0.028
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	33311647	33645539	228	-0.2801
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	33655736	33782741	92	0.012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	33782887	33867836	67	-0.2807
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	33868607	39996026	4136	0.0208
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	39997541	42875404	2270	-0.2952
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	21	42876400	47678774	2363	0.0209
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	22	17423930	44684039	13576	0.0205
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	22	44689172	44689237	2	-1.4178
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	22	44691812	49331012	3327	0.0246
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G05_1439008	X	3157107	154905589	62947	0.0032
