Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	1	3208470	68254836	36987	0.0049
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	1	68255218	68261238	4	-1.0421
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	1	68261493	245880329	91981	0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	2	474222	12220534	7361	0.0075
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	2	12220633	12220895	3	0.9856
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	2	12220953	28552379	9866	0.0025
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	2	28553403	28773839	152	0.5644
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	2	28779057	242124735	113837	0.002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	3	526235	20955236	11205	-0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	3	20966436	20977048	11	-0.9255
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	3	20980802	82838061	36138	-0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	3	82838682	82838867	2	-1.4547
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	3	82841433	88905755	2775	-4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	3	88905876	88906183	2	-1.5578
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	3	88916606	199023074	56177	-0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	4	1043934	189836143	102675	-0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	5	967233	180293075	100447	8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	6	959281	170745844	96422	0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	7	671810	158077879	81267	-3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	8	607667	20289694	10872	-8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	8	20290237	20290269	2	-2.3068
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	8	20292764	145304484	70602	-3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	9	779932	23897082	14770	-0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	9	23902009	23906132	4	-1.0198
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	9	23909026	140058573	53169	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	10	405240	72413319	41761	0.0054
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	10	72413555	72416877	2	-1.4248
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	10	72416941	135075077	39042	0.0071
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	11	446120	18826157	11330	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	11	18826267	18826686	3	-1.1863
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	11	18827604	133647740	65853	0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	12	760163	131671419	73896	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	13	18348806	31858805	8236	-0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	13	31858923	31859202	6	-0.7117
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	13	31863730	74601462	23843	-5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	13	74602834	74605903	5	-1.0677
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	13	74609414	114005560	24533	-4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	14	19571208	105059083	49410	-7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	15	21238778	99701830	44517	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	16	593460	8550969	3718	-0.0043
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	16	8557380	8557763	2	-1.2373
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	16	8560696	60527807	20128	-7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	16	60539214	60591857	39	0.6982
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	16	60592653	60595697	5	-0.79
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	16	60596413	78303107	10843	0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	16	78305386	78330288	24	-0.376
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	16	78330609	87907437	6076	0.0044
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	17	933971	78510305	36956	-3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	18	319586	75210228	42633	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	19	235018	49171335	17939	-0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	19	49171599	49171600	2	-1.6329
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	19	49174547	63570038	5986	-0.0062
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	20	403764	40191506	22932	0
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	20	40192033	40192758	2	-1.2665
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	20	40193504	52240833	7912	0.0072
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	20	52241297	52241469	3	-0.8937
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	20	52242186	61690281	6385	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	21	14269492	46503202	20567	0.003
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	22	15803930	47717016	16909	0.0066
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	X	3167107	119682944	47504	0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	X	119686175	119686649	2	-2.9055
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_G12_1439038	X	119690426	154558783	15487	6e-04
